RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 DYNC1H1Q14204 4646 aaKnown RBP13.61□□□□□ -0.23
HMGA2-211ENST00000545998 A0A087WTM6 91 aa13.6□□□□□ -0.23
HMGA2-211ENST00000545998 LRCOL1A6NCL2 159 aa13.6□□□□□ -0.23
HMGA2-211ENST00000545998 RPL39P62891 51 aaKnown RBP13.6□□□□□ -0.23
HMGA2-211ENST00000545998 MAPKAPK5-AS1Q8N8E1 139 aa13.6□□□□□ -0.23
HMGA2-211ENST00000545998 CDC42SE2Q9NRR3 84 aa13.6□□□□□ -0.23
HMGA2-211ENST00000545998 K7EMI3 77 aa13.59□□□□□ -0.23
HMGA2-211ENST00000545998 SMAGPQ0VAQ4 97 aa13.59□□□□□ -0.23
HMGA2-211ENST00000545998 TIMM21Q9BVV7 248 aa13.59□□□□□ -0.23
HMGA2-211ENST00000545998 TRAV8-4A0A0B4J246 113 aa13.58□□□□□ -0.24
HMGA2-211ENST00000545998 ORMDL2Q53FV1 153 aa13.58□□□□□ -0.24
HMGA2-211ENST00000545998 DGAT2L7PQ6IED9 249 aa13.58□□□□□ -0.24
HMGA2-211ENST00000545998 KRTAP26-1Q6PEX3 210 aa13.58□□□□□ -0.24
HMGA2-211ENST00000545998 ZNF664Q8N3J9 261 aa13.58□□□□□ -0.24
HMGA2-211ENST00000545998 BIRC6Q9NR09 4857 aa13.57□□□□□ -0.24
HMGA2-211ENST00000545998 IGLV10-54A0A075B6I4 117 aa13.56□□□□□ -0.24
HMGA2-211ENST00000545998 PRSS3P2Q8NHM4 247 aa13.56□□□□□ -0.24
HMGA2-211ENST00000545998 IGKV3OR2-268A0A0C4DH90 116 aa13.55□□□□□ -0.24
HMGA2-211ENST00000545998 LINC01546A6NGU7 62 aa13.55□□□□□ -0.24
HMGA2-211ENST00000545998 EREGO14944 169 aa13.55□□□□□ -0.24
HMGA2-211ENST00000545998 SPANXA1Q9NS26 97 aa13.55□□□□□ -0.24
HMGA2-211ENST00000545998 COLCA2A8K830 154 aa13.54□□□□□ -0.24
HMGA2-211ENST00000545998 SCO1O75880 301 aa13.54□□□□□ -0.24
HMGA2-211ENST00000545998 WFDC2Q14508 124 aa13.54□□□□□ -0.24
HMGA2-211ENST00000545998 BAALCQ8WXS3 180 aa13.54□□□□□ -0.24
HMGA2-211ENST00000545998 FAM104AQ969W3 186 aa13.54□□□□□ -0.24
HMGA2-211ENST00000545998 LRP1BQ9NZR2 4599 aa13.54□□□□□ -0.24
HMGA2-211ENST00000545998 Q6ZUT4 128 aa13.54□□□□□ -0.24
HMGA2-211ENST00000545998 SPATA12Q7Z6I5 190 aa13.54□□□□□ -0.24
HMGA2-211ENST00000545998 C18orf32Q8TCD1 76 aa13.54□□□□□ -0.24
HMGA2-211ENST00000545998 KRTAP10-2P60368 255 aa13.53□□□□□ -0.24
HMGA2-211ENST00000545998 C2orf66Q6UXQ4 117 aa13.53□□□□□ -0.24
HMGA2-211ENST00000545998 PYGO1Q9Y3Y4 419 aa13.53□□□□□ -0.24
HMGA2-211ENST00000545998 LINC00959A0A1B0GUT2 108 aa13.52□□□□□ -0.25
HMGA2-211ENST00000545998 LECT2O14960 151 aa13.52□□□□□ -0.25
HMGA2-211ENST00000545998 RNASE13Q5GAN3 156 aaKnown RBP13.52□□□□□ -0.25
HMGA2-211ENST00000545998 CYSLTR1Q9Y271 337 aa13.52□□□□□ -0.25
HMGA2-211ENST00000545998 MRPS36P82909 103 aaKnown RBP13.51□□□□□ -0.25
HMGA2-211ENST00000545998 FA2HQ7L5A8 372 aa13.5□□□□□ -0.25
HMGA2-211ENST00000545998 Q8N814 137 aa13.5□□□□□ -0.25
HMGA2-211ENST00000545998 CHCHD10Q8WYQ3 142 aaPredicted RBP13.5□□□□□ -0.25
HMGA2-211ENST00000545998 OPRPNQ99935 248 aaPredicted RBP13.5□□□□□ -0.25
HMGA2-211ENST00000545998 G0S2P27469 103 aa13.49□□□□□ -0.25
HMGA2-211ENST00000545998 TRGC2P03986 189 aa13.49□□□□□ -0.25
HMGA2-211ENST00000545998 URB1-AS1Q96HZ7 61 aa13.49□□□□□ -0.25
HMGA2-211ENST00000545998 TOMM6Q96B49 74 aa13.48□□□□□ -0.25
HMGA2-211ENST00000545998 IGLV4-3A0A075B6K6 122 aa13.47□□□□□ -0.25
HMGA2-211ENST00000545998 GAGE12HA6NDE8 117 aa13.47□□□□□ -0.25
HMGA2-211ENST00000545998 SS18Q15532 418 aa13.47□□□□□ -0.25
HMGA2-211ENST00000545998 PGPEP1Q9NXJ5 209 aa13.47□□□□□ -0.25
HMGA2-211ENST00000545998 IGIPA6NJ69 53 aa13.46□□□□□ -0.25
HMGA2-211ENST00000545998 USP17L23D6RBM5 183 aa13.46□□□□□ -0.25
HMGA2-211ENST00000545998 CCL25O15444 150 aa13.46□□□□□ -0.25
HMGA2-211ENST00000545998 ATP6V1G1O75348 118 aa13.46□□□□□ -0.25
HMGA2-211ENST00000545998 LINC00614P0C842 121 aa13.46□□□□□ -0.25
HMGA2-211ENST00000545998 FUSP35637 526 aaKnown RBP eCLIP13.46□□□□□ -0.25
HMGA2-211ENST00000545998 AP5S1Q9NUS5 200 aa13.46□□□□□ -0.25
HMGA2-211ENST00000545998 NPSP0C0P6 89 aa13.45□□□□□ -0.26
HMGA2-211ENST00000545998 S100A1P23297 94 aa13.45□□□□□ -0.26
HMGA2-211ENST00000545998 XCL1P47992 114 aa13.45□□□□□ -0.26
HMGA2-211ENST00000545998 TMEM141Q96I45 108 aa13.45□□□□□ -0.26
HMGA2-211ENST00000545998 TRAV13-1A0A0B4J241 112 aa13.45□□□□□ -0.26
HMGA2-211ENST00000545998 C1orf196B1AJZ1 125 aa13.45□□□□□ -0.26
HMGA2-211ENST00000545998 FOXI1Q12951 378 aa13.45□□□□□ -0.26
HMGA2-211ENST00000545998 CDPF1Q6NVV7 123 aa13.45□□□□□ -0.26
HMGA2-211ENST00000545998 RAB5BP61020 215 aa13.44□□□□□ -0.26
HMGA2-211ENST00000545998 NTN5Q8WTR8 489 aaPredicted RBP13.44□□□□□ -0.26
HMGA2-211ENST00000545998 TIMM17AQ99595 171 aa13.44□□□□□ -0.26
HMGA2-211ENST00000545998 C16orf90A8MZG2 172 aa13.43□□□□□ -0.26
HMGA2-211ENST00000545998 C14orf177Q52M58 125 aa13.43□□□□□ -0.26
HMGA2-211ENST00000545998 CD164L2Q6UWJ8 174 aa13.43□□□□□ -0.26
HMGA2-211ENST00000545998 LINC01549A6NIU2 74 aa13.42□□□□□ -0.26
HMGA2-211ENST00000545998 IFITM10A6NMD0 228 aa13.42□□□□□ -0.26
HMGA2-211ENST00000545998 ERASQ7Z444 233 aa13.42□□□□□ -0.26
HMGA2-211ENST00000545998 A0A096LNJ9 63 aa13.41□□□□□ -0.26
HMGA2-211ENST00000545998 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.41□□□□□ -0.26
HMGA2-211ENST00000545998 Q6ZN92 141 aa13.41□□□□□ -0.26
HMGA2-211ENST00000545998 TEX43Q6ZNM6 134 aa13.41□□□□□ -0.26
HMGA2-211ENST00000545998 LINC00173Q6ZV60 143 aa13.41□□□□□ -0.26
HMGA2-211ENST00000545998 SCGB3A1Q96QR1 104 aa13.41□□□□□ -0.26
HMGA2-211ENST00000545998 AMELXQ99217 191 aa13.41□□□□□ -0.26
HMGA2-211ENST00000545998 ZC2HC1BQ5TFG8 222 aa13.4□□□□□ -0.26
HMGA2-211ENST00000545998 VCX2Q9H322 139 aa13.4□□□□□ -0.26
HMGA2-211ENST00000545998 DNAH8Q96JB1 4490 aa13.39□□□□□ -0.27
HMGA2-211ENST00000545998 APOBP04114 4563 aaKnown RBP13.39□□□□□ -0.27
HMGA2-211ENST00000545998 IGLV5-52A0A0A0MRZ9 124 aa13.39□□□□□ -0.27
HMGA2-211ENST00000545998 PRSS1P07477 247 aa13.39□□□□□ -0.27
HMGA2-211ENST00000545998 C15orf56Q8N910 161 aa13.39□□□□□ -0.27
HMGA2-211ENST00000545998 CHCHD1Q96BP2 118 aaKnown RBP13.39□□□□□ -0.27
HMGA2-211ENST00000545998 PMCHL1Q16048 86 aa13.38□□□□□ -0.27
HMGA2-211ENST00000545998 PAPPA-AS1Q5QFB9 102 aa13.38□□□□□ -0.27
HMGA2-211ENST00000545998 C2orf88Q9BSF0 95 aa13.38□□□□□ -0.27
HMGA2-211ENST00000545998 HBDP02042 147 aa13.37□□□□□ -0.27
HMGA2-211ENST00000545998 CFAP161Q6P656 301 aa13.37□□□□□ -0.27
HMGA2-211ENST00000545998 UBE2D1P51668 147 aa13.37□□□□□ -0.27
HMGA2-211ENST00000545998 BAGE3Q86Y29 109 aa13.37□□□□□ -0.27
HMGA2-211ENST00000545998 hDV102S1A0JD36 115 aa13.35□□□□□ -0.27
HMGA2-211ENST00000545998 COX7A2LO14548 114 aa13.35□□□□□ -0.27
HMGA2-211ENST00000545998 LINC00242Q5T6M2 205 aa13.35□□□□□ -0.27
HMGA2-211ENST00000545998 KIAA1109Q2LD37 5005 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms