RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 GAGE5Q13069 117 aa13.71□□□□□ -0.22
MSLN-202ENST00000545450 GAGE6Q13070 117 aa13.71□□□□□ -0.22
MSLN-202ENST00000545450 TEX49A0A1B0GTD5 131 aa13.7□□□□□ -0.22
MSLN-202ENST00000545450 ADARB2-AS1A8MUL3 147 aa13.7□□□□□ -0.22
MSLN-202ENST00000545450 CRLF1O75462 422 aa13.7□□□□□ -0.22
MSLN-202ENST00000545450 SNRPD3P62318 126 aaKnown RBP13.7□□□□□ -0.22
MSLN-202ENST00000545450 SPANXDQ9BXN6 97 aa13.7□□□□□ -0.22
MSLN-202ENST00000545450 EDA2RQ9HAV5 297 aa13.7□□□□□ -0.22
MSLN-202ENST00000545450 SPANXCQ9NY87 97 aa13.7□□□□□ -0.22
MSLN-202ENST00000545450 SPINK13Q1W4C9 94 aa13.69□□□□□ -0.22
MSLN-202ENST00000545450 K7EQG2 157 aa13.69□□□□□ -0.22
MSLN-202ENST00000545450 Q6Q795 121 aa13.69□□□□□ -0.22
MSLN-202ENST00000545450 WNK1Q9H4A3 2382 aa13.69□□□□□ -0.22
MSLN-202ENST00000545450 SORL1Q92673 2214 aa13.69□□□□□ -0.22
MSLN-202ENST00000545450 IGHV1-58A0A0C4DH39 117 aa13.68□□□□□ -0.22
MSLN-202ENST00000545450 NDUFV3P56181 108 aaKnown RBP13.68□□□□□ -0.22
MSLN-202ENST00000545450 ADAMTSL4-AS1Q5T5F5 129 aa13.68□□□□□ -0.22
MSLN-202ENST00000545450 TRAV8-3A0A0A6YYJ7 113 aa13.68□□□□□ -0.22
MSLN-202ENST00000545450 TRAV8-4A0A0B4J246 113 aa13.68□□□□□ -0.22
MSLN-202ENST00000545450 INAFM1C9JVW0 142 aa13.68□□□□□ -0.22
MSLN-202ENST00000545450 PRSS2P07478 247 aa13.68□□□□□ -0.22
MSLN-202ENST00000545450 ICOSQ9Y6W8 199 aa13.68□□□□□ -0.22
MSLN-202ENST00000545450 A0A1W2PRX2 142 aa13.67□□□□□ -0.22
MSLN-202ENST00000545450 H3BMM0 161 aa13.67□□□□□ -0.22
MSLN-202ENST00000545450 UBE2WQ96B02 151 aa13.67□□□□□ -0.22
MSLN-202ENST00000545450 TRGV11A0A075B6L2 103 aa13.66□□□□□ -0.22
MSLN-202ENST00000545450 CITED2Q99967 270 aaPredicted RBP13.66□□□□□ -0.22
MSLN-202ENST00000545450 NDUFA12Q9UI09 145 aa13.66□□□□□ -0.22
MSLN-202ENST00000545450 H7C423 109 aa13.66□□□□□ -0.22
MSLN-202ENST00000545450 FN1P02751 2386 aaKnown RBP13.66□□□□□ -0.22
MSLN-202ENST00000545450 FLNBO75369 2602 aaKnown RBP13.66□□□□□ -0.22
MSLN-202ENST00000545450 MIAQ16674 131 aa13.65□□□□□ -0.22
MSLN-202ENST00000545450 VSIG2Q96IQ7 327 aa13.65□□□□□ -0.22
MSLN-202ENST00000545450 C2orf82Q6UX34 121 aa13.65□□□□□ -0.22
MSLN-202ENST00000545450 H3BT86 120 aa13.64□□□□□ -0.23
MSLN-202ENST00000545450 CEMP1Q6PRD7 247 aaPredicted RBP13.64□□□□□ -0.23
MSLN-202ENST00000545450 PEMTQ9UBM1 199 aa13.64□□□□□ -0.23
MSLN-202ENST00000545450 TINCRA0A1B0GVN0 87 aa13.64□□□□□ -0.23
MSLN-202ENST00000545450 NDUFA7O95182 113 aa13.64□□□□□ -0.23
MSLN-202ENST00000545450 COX6CP09669 75 aa13.63□□□□□ -0.23
MSLN-202ENST00000545450 IFITM1P13164 125 aa13.63□□□□□ -0.23
MSLN-202ENST00000545450 SS18L2Q9UHA2 77 aa13.63□□□□□ -0.23
MSLN-202ENST00000545450 TTC32Q5I0X7 151 aa13.62□□□□□ -0.23
MSLN-202ENST00000545450 C15orf53Q8NAA6 179 aa13.62□□□□□ -0.23
MSLN-202ENST00000545450 B5MCH6 92 aa13.62□□□□□ -0.23
MSLN-202ENST00000545450 PROK1P58294 105 aa13.62□□□□□ -0.23
MSLN-202ENST00000545450 CCL24O00175 119 aa13.61□□□□□ -0.23
MSLN-202ENST00000545450 IGHV3-73A0A0B4J1V6 119 aa13.61□□□□□ -0.23
MSLN-202ENST00000545450 RBMY1A1P0DJD3 496 aaKnown RBP13.61□□□□□ -0.23
MSLN-202ENST00000545450 RBMY1CP0DJD4 496 aa13.61□□□□□ -0.23
MSLN-202ENST00000545450 RBMY1FQ15415 496 aaKnown RBP13.61□□□□□ -0.23
MSLN-202ENST00000545450 RNASE13Q5GAN3 156 aaKnown RBP13.61□□□□□ -0.23
MSLN-202ENST00000545450 TMEM61Q8N0U2 210 aa13.61□□□□□ -0.23
MSLN-202ENST00000545450 TNFRSF18Q9Y5U5 241 aa13.61□□□□□ -0.23
MSLN-202ENST00000545450 LST1O00453 97 aa13.6□□□□□ -0.23
MSLN-202ENST00000545450 TIMM17BO60830 172 aa13.6□□□□□ -0.23
MSLN-202ENST00000545450 MRPL23Q16540 153 aaKnown RBP13.6□□□□□ -0.23
MSLN-202ENST00000545450 CHCHD7Q9BUK0 85 aa13.6□□□□□ -0.23
MSLN-202ENST00000545450 SPANXA1Q9NS26 97 aa13.6□□□□□ -0.23
MSLN-202ENST00000545450 UBE2D4Q9Y2X8 147 aa13.6□□□□□ -0.23
MSLN-202ENST00000545450 GAGE12JA6NER3 117 aa13.59□□□□□ -0.23
MSLN-202ENST00000545450 A8MZ25 164 aa13.59□□□□□ -0.23
MSLN-202ENST00000545450 GAGE7O76087 117 aa13.59□□□□□ -0.23
MSLN-202ENST00000545450 GAGE12FP0CL80 117 aa13.59□□□□□ -0.23
MSLN-202ENST00000545450 GAGE12GP0CL81 117 aa13.59□□□□□ -0.23
MSLN-202ENST00000545450 GAGE12IP0CL82 117 aa13.59□□□□□ -0.23
MSLN-202ENST00000545450 GAGE4Q13068 117 aa13.59□□□□□ -0.23
MSLN-202ENST00000545450 DEFB121Q5J5C9 76 aa13.59□□□□□ -0.23
MSLN-202ENST00000545450 C2CD3Q4AC94 2353 aa13.59□□□□□ -0.23
MSLN-202ENST00000545450 NIPBLQ6KC79 2804 aaeCLIP13.59□□□□□ -0.23
MSLN-202ENST00000545450 FAM240AA0A1B0GVK7 77 aa13.58□□□□□ -0.24
MSLN-202ENST00000545450 CLEC2BQ92478 149 aa13.58□□□□□ -0.24
MSLN-202ENST00000545450 DYNLRB2Q8TF09 96 aa13.58□□□□□ -0.24
MSLN-202ENST00000545450 NPC2P61916 151 aa13.57□□□□□ -0.24
MSLN-202ENST00000545450 DEFB114Q30KQ6 69 aa13.57□□□□□ -0.24
MSLN-202ENST00000545450 Q9UF83 564 aa13.57□□□□□ -0.24
MSLN-202ENST00000545450 CCDC179H3BU77 68 aa13.56□□□□□ -0.24
MSLN-202ENST00000545450 KRTAP10-3P60369 221 aa13.55□□□□□ -0.24
MSLN-202ENST00000545450 PIK3CD-AS1Q5SR53 167 aa13.55□□□□□ -0.24
MSLN-202ENST00000545450 Q6ZSN1 163 aa13.55□□□□□ -0.24
MSLN-202ENST00000545450 HTN1P15515 57 aa13.54□□□□□ -0.24
MSLN-202ENST00000545450 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.54□□□□□ -0.24
MSLN-202ENST00000545450 IGKV2-29A2NJV5 120 aaPredicted RBP13.54□□□□□ -0.24
MSLN-202ENST00000545450 F8P00451 2351 aa13.54□□□□□ -0.24
MSLN-202ENST00000545450 KNCNA6PVL3 124 aa13.53□□□□□ -0.24
MSLN-202ENST00000545450 NDUFA1O15239 70 aa13.53□□□□□ -0.24
MSLN-202ENST00000545450 DEFB131AP59861 70 aa13.53□□□□□ -0.24
MSLN-202ENST00000545450 LINC00467Q9BRT7 94 aa13.53□□□□□ -0.24
MSLN-202ENST00000545450 IGLV5-45A0A087WSX0 123 aa13.52□□□□□ -0.24
MSLN-202ENST00000545450 A8MTW9 85 aa13.52□□□□□ -0.24
MSLN-202ENST00000545450 TIRAPP58753 221 aa13.52□□□□□ -0.24
MSLN-202ENST00000545450 CDKN2A-AS1Q9UH64 79 aa13.52□□□□□ -0.25
MSLN-202ENST00000545450 DAND5Q8N907 189 aa13.51□□□□□ -0.25
MSLN-202ENST00000545450 TMEM101Q96IK0 257 aa13.51□□□□□ -0.25
MSLN-202ENST00000545450 PRM2P04554 102 aa13.5□□□□□ -0.25
MSLN-202ENST00000545450 MAP6D1Q9H9H5 199 aa13.5□□□□□ -0.25
MSLN-202ENST00000545450 DNAJC30Q96LL9 226 aa13.49□□□□□ -0.25
MSLN-202ENST00000545450 ZNF415Q09FC8 603 aa13.49□□□□□ -0.25
MSLN-202ENST00000545450 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.49□□□□□ -0.25
MSLN-202ENST00000545450 TRBV7-7A0A0K0K1E9 115 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms