RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 TMEM178BH3BS89 294 aa3.42□□□□□ -1.86
CNGA1-209ENST00000544810 TRACP01848 142 aa3.42□□□□□ -1.86
CNGA1-209ENST00000544810 TRGV3P03979 118 aa3.42□□□□□ -1.86
CNGA1-209ENST00000544810 LGALS3P17931 250 aaKnown RBP3.42□□□□□ -1.86
CNGA1-209ENST00000544810 C9orf139Q6ZV77 190 aa3.42□□□□□ -1.86
CNGA1-209ENST00000544810 DPH3Q96FX2 82 aa3.42□□□□□ -1.86
CNGA1-209ENST00000544810 CTSZQ9UBR2 303 aa3.42□□□□□ -1.86
CNGA1-209ENST00000544810 LINC00527Q9UJ94 153 aa3.42□□□□□ -1.86
CNGA1-209ENST00000544810 ZNF256Q9Y2P7 627 aaPredicted RBP3.42□□□□□ -1.86
CNGA1-209ENST00000544810 DYNC2H1Q8NCM8 4307 aaKnown RBP3.42□□□□□ -1.86
CNGA1-209ENST00000544810 IGKV2-40A0A087WW87 121 aaPredicted RBP3.41□□□□□ -1.86
CNGA1-209ENST00000544810 IGKV3D-20A0A0C4DH25 116 aa3.41□□□□□ -1.86
CNGA1-209ENST00000544810 A0A0U1RRA0 63 aa3.41□□□□□ -1.86
CNGA1-209ENST00000544810 IGIPA6NJ69 53 aa3.41□□□□□ -1.86
CNGA1-209ENST00000544810 K7EIL1 84 aa3.41□□□□□ -1.86
CNGA1-209ENST00000544810 K7EIM0 57 aa3.41□□□□□ -1.86
CNGA1-209ENST00000544810 IGKV2D-40P01614 121 aaPredicted RBP3.41□□□□□ -1.86
CNGA1-209ENST00000544810 ZNF876PQ49A33 203 aa3.41□□□□□ -1.86
CNGA1-209ENST00000544810 DAND5Q8N907 189 aa3.41□□□□□ -1.86
CNGA1-209ENST00000544810 LINC01006Q8NI28 216 aa3.41□□□□□ -1.86
CNGA1-209ENST00000544810 ICOSQ9Y6W8 199 aa3.41□□□□□ -1.86
CNGA1-209ENST00000544810 IGLV3-9A0A075B6K5 115 aa3.41□□□□□ -1.86
CNGA1-209ENST00000544810 Q1RN00 199 aa3.41□□□□□ -1.86
CNGA1-209ENST00000544810 DUX4L9Q6RFH8 374 aaPredicted RBP3.41□□□□□ -1.86
CNGA1-209ENST00000544810 DCANP1Q8TF63 244 aa3.41□□□□□ -1.86
CNGA1-209ENST00000544810 DPH3P1Q9H4G8 78 aa3.41□□□□□ -1.86
CNGA1-209ENST00000544810 EDA2RQ9HAV5 297 aa3.41□□□□□ -1.86
CNGA1-209ENST00000544810 LENEPQ9Y5L5 61 aa3.41□□□□□ -1.86
CNGA1-209ENST00000544810 HERC2O95714 4834 aa3.41□□□□□ -1.86
CNGA1-209ENST00000544810 IGHV1-69P01742 117 aa3.4□□□□□ -1.86
CNGA1-209ENST00000544810 TSPEAR-AS2P59090 65 aa3.4□□□□□ -1.86
CNGA1-209ENST00000544810 SPANXN1Q5VSR9 72 aa3.4□□□□□ -1.86
CNGA1-209ENST00000544810 CEMP1Q6PRD7 247 aaPredicted RBP3.4□□□□□ -1.86
CNGA1-209ENST00000544810 MUSTN1Q8IVN3 82 aa3.4□□□□□ -1.86
CNGA1-209ENST00000544810 MAP6D1Q9H9H5 199 aa3.4□□□□□ -1.86
CNGA1-209ENST00000544810 IGHV4OR15-8A0A075B7B6 117 aa3.4□□□□□ -1.87
CNGA1-209ENST00000544810 A0A087WW49 117 aa3.4□□□□□ -1.87
CNGA1-209ENST00000544810 IGHV4-38-2P0DP08 117 aa3.4□□□□□ -1.87
CNGA1-209ENST00000544810 DLX1P56177 255 aa3.4□□□□□ -1.87
CNGA1-209ENST00000544810 CCL8P80075 99 aa3.4□□□□□ -1.87
CNGA1-209ENST00000544810 FAM222AQ5U5X8 452 aa3.4□□□□□ -1.87
CNGA1-209ENST00000544810 Q5XG85 94 aa3.4□□□□□ -1.87
CNGA1-209ENST00000544810 Q6YL49 198 aa3.4□□□□□ -1.87
CNGA1-209ENST00000544810 STHQ8IWL8 128 aa3.4□□□□□ -1.87
CNGA1-209ENST00000544810 PRO0628Q9UI54 55 aa3.4□□□□□ -1.87
CNGA1-209ENST00000544810 TENM2Q9NT68 2774 aa3.4□□□□□ -1.87
CNGA1-209ENST00000544810 PCLOQ9Y6V0 5065 aa3.4□□□□□ -1.87
CNGA1-209ENST00000544810 IGHV3OR16-10A0A075B7F0 116 aa3.39□□□□□ -1.87
CNGA1-209ENST00000544810 TSHBP01222 138 aa3.39□□□□□ -1.87
CNGA1-209ENST00000544810 IGHV1-46P01743 117 aa3.39□□□□□ -1.87
CNGA1-209ENST00000544810 RPL18AQ02543 176 aaKnown RBP3.39□□□□□ -1.87
CNGA1-209ENST00000544810 DEFB112Q30KQ8 113 aa3.39□□□□□ -1.87
CNGA1-209ENST00000544810 TMEM86BQ8N661 226 aa3.39□□□□□ -1.87
CNGA1-209ENST00000544810 Q8TAT8 98 aa3.39□□□□□ -1.87
CNGA1-209ENST00000544810 B9D2Q9BPU9 175 aa3.39□□□□□ -1.87
CNGA1-209ENST00000544810 ZNRD1Q9P1U0 126 aa3.39□□□□□ -1.87
CNGA1-209ENST00000544810 NOTCH3Q9UM47 2321 aa3.39□□□□□ -1.87
CNGA1-209ENST00000544810 TRAV26-2A0A0B4J265 109 aa3.39□□□□□ -1.87
CNGA1-209ENST00000544810 TIMM17BO60830 172 aa3.39□□□□□ -1.87
CNGA1-209ENST00000544810 ZNF22P17026 224 aaPredicted RBP3.39□□□□□ -1.87
CNGA1-209ENST00000544810 PIK3CD-AS1Q5SR53 167 aa3.39□□□□□ -1.87
CNGA1-209ENST00000544810 CASC10Q5T4H9 136 aa3.39□□□□□ -1.87
CNGA1-209ENST00000544810 C9orf47Q6ZRZ4 202 aa3.39□□□□□ -1.87
CNGA1-209ENST00000544810 DYNAPQ8N1N2 210 aa3.39□□□□□ -1.87
CNGA1-209ENST00000544810 SERP2Q8N6R1 65 aa3.39□□□□□ -1.87
CNGA1-209ENST00000544810 C14orf178Q8N769 122 aaPredicted RBP3.39□□□□□ -1.87
CNGA1-209ENST00000544810 CCL13Q99616 98 aa3.39□□□□□ -1.87
CNGA1-209ENST00000544810 UPK3BQ9BT76 320 aa3.39□□□□□ -1.87
CNGA1-209ENST00000544810 IGHV3-21A0A0B4J1V1 117 aa3.38□□□□□ -1.87
CNGA1-209ENST00000544810 A0A0J9YXY3 114 aa3.38□□□□□ -1.87
CNGA1-209ENST00000544810 EPM2AB3EWF7 344 aa3.38□□□□□ -1.87
CNGA1-209ENST00000544810 INAFM2P0DMQ5 153 aa3.38□□□□□ -1.87
CNGA1-209ENST00000544810 SMCR5Q8TEV8 140 aa3.38□□□□□ -1.87
CNGA1-209ENST00000544810 CCL17Q92583 94 aa3.38□□□□□ -1.87
CNGA1-209ENST00000544810 TIMM21Q9BVV7 248 aa3.38□□□□□ -1.87
CNGA1-209ENST00000544810 KLK15Q9H2R5 256 aa3.38□□□□□ -1.87
CNGA1-209ENST00000544810 C11orf21Q9P2W6 132 aa3.38□□□□□ -1.87
CNGA1-209ENST00000544810 KLK5Q9Y337 293 aaPredicted RBP3.38□□□□□ -1.87
CNGA1-209ENST00000544810 SMAD5-AS1Q9Y6J3 95 aa3.38□□□□□ -1.87
CNGA1-209ENST00000544810 NXPH4O95158 308 aa3.38□□□□□ -1.87
CNGA1-209ENST00000544810 PSMB8P28062 276 aa3.38□□□□□ -1.87
CNGA1-209ENST00000544810 UBE2E1P51965 193 aa3.38□□□□□ -1.87
CNGA1-209ENST00000544810 POLR2KP53803 58 aaKnown RBP3.38□□□□□ -1.87
CNGA1-209ENST00000544810 ODF3L2Q3SX64 289 aa3.38□□□□□ -1.87
CNGA1-209ENST00000544810 GPHB5Q86YW7 130 aa3.38□□□□□ -1.87
CNGA1-209ENST00000544810 LITAFQ99732 161 aa3.38□□□□□ -1.87
CNGA1-209ENST00000544810 C16orf95Q9H693 158 aa3.38□□□□□ -1.87
CNGA1-209ENST00000544810 IGLV11-55A0A075B6I3 123 aa3.37□□□□□ -1.87
CNGA1-209ENST00000544810 TRBV7-1A0A0A6YYK4 115 aa3.37□□□□□ -1.87
CNGA1-209ENST00000544810 TRAV13-1A0A0B4J241 112 aa3.37□□□□□ -1.87
CNGA1-209ENST00000544810 TRBV6-5A0A0K0K1A5 114 aa3.37□□□□□ -1.87
CNGA1-209ENST00000544810 hADV29S1A0JD25 119 aa3.37□□□□□ -1.87
CNGA1-209ENST00000544810 NDUFB3O43676 98 aa3.37□□□□□ -1.87
CNGA1-209ENST00000544810 NDUFC2O95298 119 aa3.37□□□□□ -1.87
CNGA1-209ENST00000544810 Q6ZSV7 163 aa3.37□□□□□ -1.87
CNGA1-209ENST00000544810 MUC7Q8TAX7 377 aa3.37□□□□□ -1.87
CNGA1-209ENST00000544810 TP53TG1Q9Y2A0 90 aa3.37□□□□□ -1.87
CNGA1-209ENST00000544810 IGHV1-3A0A0C4DH29 117 aa3.37□□□□□ -1.87
CNGA1-209ENST00000544810 ENSAO43768 121 aaKnown RBP3.37□□□□□ -1.87
CNGA1-209ENST00000544810 IGLV1-47P01700 117 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms