RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 RPL32P62910 135 aaKnown RBP8.97□□□□□ -0.97
VAMP1-208ENST00000544432 SDIM1Q6ZPB5 146 aa8.97□□□□□ -0.97
VAMP1-208ENST00000544432 C20orf78Q9BR46 151 aa8.97□□□□□ -0.97
VAMP1-208ENST00000544432 AP5S1Q9NUS5 200 aa8.97□□□□□ -0.97
VAMP1-208ENST00000544432 FLG2Q5D862 2391 aaPredicted RBP8.97□□□□□ -0.97
VAMP1-208ENST00000544432 MYCBP2O75592 4640 aa8.96□□□□□ -0.97
VAMP1-208ENST00000544432 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.96□□□□□ -0.98
VAMP1-208ENST00000544432 IGKV3OR2-268A0A0C4DH90 116 aa8.96□□□□□ -0.98
VAMP1-208ENST00000544432 A0A1B0GXF2 115 aa8.96□□□□□ -0.98
VAMP1-208ENST00000544432 F8W036 122 aa8.96□□□□□ -0.98
VAMP1-208ENST00000544432 HBBP68871 147 aa8.96□□□□□ -0.98
VAMP1-208ENST00000544432 KIR2DL4Q99706 377 aa8.96□□□□□ -0.98
VAMP1-208ENST00000544432 CDC42SE2Q9NRR3 84 aa8.96□□□□□ -0.98
VAMP1-208ENST00000544432 CSDC2Q9Y534 153 aaKnown RBP8.96□□□□□ -0.98
VAMP1-208ENST00000544432 DMBT1Q9UGM3 2413 aaPredicted RBP8.95□□□□□ -0.98
VAMP1-208ENST00000544432 TCAPO15273 167 aa8.95□□□□□ -0.98
VAMP1-208ENST00000544432 SLPIP03973 132 aa8.95□□□□□ -0.98
VAMP1-208ENST00000544432 FCER1GP30273 86 aa8.95□□□□□ -0.98
VAMP1-208ENST00000544432 CKS2P33552 79 aa8.95□□□□□ -0.98
VAMP1-208ENST00000544432 SMAGPQ0VAQ4 97 aa8.95□□□□□ -0.98
VAMP1-208ENST00000544432 PNRC1Q12796 327 aaPredicted RBP8.95□□□□□ -0.98
VAMP1-208ENST00000544432 FOXI1Q12951 378 aa8.95□□□□□ -0.98
VAMP1-208ENST00000544432 ATP5L2Q7Z4Y8 100 aa8.95□□□□□ -0.98
VAMP1-208ENST00000544432 C15orf56Q8N910 161 aa8.95□□□□□ -0.98
VAMP1-208ENST00000544432 LINC00959A0A1B0GUT2 108 aa8.94□□□□□ -0.98
VAMP1-208ENST00000544432 CIRBPQ14011 172 aaKnown RBP8.94□□□□□ -0.98
VAMP1-208ENST00000544432 ZNF664Q8N3J9 261 aa8.94□□□□□ -0.98
VAMP1-208ENST00000544432 IGHV3-64A0A075B6Q5 118 aa8.93□□□□□ -0.98
VAMP1-208ENST00000544432 PHOX2AO14813 284 aa8.93□□□□□ -0.98
VAMP1-208ENST00000544432 CCL25O15444 150 aa8.93□□□□□ -0.98
VAMP1-208ENST00000544432 PPBPP02775 128 aa8.93□□□□□ -0.98
VAMP1-208ENST00000544432 MRPL54Q6P161 138 aaKnown RBP8.93□□□□□ -0.98
VAMP1-208ENST00000544432 TIMM21Q9BVV7 248 aa8.93□□□□□ -0.98
VAMP1-208ENST00000544432 GVQW2A0A096LPI5 108 aaPredicted RBP8.92□□□□□ -0.98
VAMP1-208ENST00000544432 TNFRSF6BO95407 300 aa8.92□□□□□ -0.98
VAMP1-208ENST00000544432 SS18Q15532 418 aa8.92□□□□□ -0.98
VAMP1-208ENST00000544432 CLLU1Q5K131 121 aa8.92□□□□□ -0.98
VAMP1-208ENST00000544432 TMEM18Q96B42 140 aa8.92□□□□□ -0.98
VAMP1-208ENST00000544432 ANAPC16Q96DE5 110 aa8.92□□□□□ -0.98
VAMP1-208ENST00000544432 UBE2D4Q9Y2X8 147 aa8.92□□□□□ -0.98
VAMP1-208ENST00000544432 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.92□□□□□ -0.98
VAMP1-208ENST00000544432 D6R8Y8 96 aa8.91□□□□□ -0.98
VAMP1-208ENST00000544432 MT-ND4LP03901 98 aa8.91□□□□□ -0.98
VAMP1-208ENST00000544432 XCL1P47992 114 aa8.91□□□□□ -0.98
VAMP1-208ENST00000544432 KRTAP10-4P60372 401 aaPredicted RBP8.91□□□□□ -0.98
VAMP1-208ENST00000544432 CD164L2Q6UWJ8 174 aa8.91□□□□□ -0.98
VAMP1-208ENST00000544432 IGHV1-58A0A0C4DH39 117 aa8.9□□□□□ -0.98
VAMP1-208ENST00000544432 C1orf196B1AJZ1 125 aa8.9□□□□□ -0.98
VAMP1-208ENST00000544432 SMIM2Q9BVW6 85 aa8.9□□□□□ -0.98
VAMP1-208ENST00000544432 HERC1Q15751 4861 aa8.89□□□□□ -0.99
VAMP1-208ENST00000544432 PANO1I0J062 215 aa8.89□□□□□ -0.99
VAMP1-208ENST00000544432 NPYP01303 97 aa8.89□□□□□ -0.99
VAMP1-208ENST00000544432 HIGD2BQ4VC39 106 aa8.89□□□□□ -0.99
VAMP1-208ENST00000544432 ORMDL3Q8N138 153 aa8.89□□□□□ -0.99
VAMP1-208ENST00000544432 TMEM136Q6ZRR5 245 aa8.88□□□□□ -0.99
VAMP1-208ENST00000544432 KRTAP3-3Q9BYR6 98 aa8.88□□□□□ -0.99
VAMP1-208ENST00000544432 KRTAP3-2Q9BYR7 98 aa8.88□□□□□ -0.99
VAMP1-208ENST00000544432 PRSS47A8MTI9 375 aa8.87□□□□□ -0.99
VAMP1-208ENST00000544432 UQCC3Q6UW78 93 aa8.87□□□□□ -0.99
VAMP1-208ENST00000544432 LAMTOR2Q9Y2Q5 125 aa8.87□□□□□ -0.99
VAMP1-208ENST00000544432 MRPS36P82909 103 aaKnown RBP8.86□□□□□ -0.99
VAMP1-208ENST00000544432 IFITM2Q01629 132 aa8.86□□□□□ -0.99
VAMP1-208ENST00000544432 SPACA4Q8TDM5 124 aa8.86□□□□□ -0.99
VAMP1-208ENST00000544432 PRELID3AQ96N28 172 aa8.86□□□□□ -0.99
VAMP1-208ENST00000544432 IMMP2LQ96T52 175 aa8.86□□□□□ -0.99
VAMP1-208ENST00000544432 SPANXA1Q9NS26 97 aa8.86□□□□□ -0.99
VAMP1-208ENST00000544432 COX7A2LO14548 114 aa8.85□□□□□ -0.99
VAMP1-208ENST00000544432 RPL37AP61513 92 aaKnown RBP8.85□□□□□ -0.99
VAMP1-208ENST00000544432 RPL39P62891 51 aaKnown RBP8.85□□□□□ -0.99
VAMP1-208ENST00000544432 COX6A2Q02221 97 aa8.85□□□□□ -0.99
VAMP1-208ENST00000544432 Q6ZUT4 128 aa8.85□□□□□ -0.99
VAMP1-208ENST00000544432 DPH3Q96FX2 82 aa8.85□□□□□ -0.99
VAMP1-208ENST00000544432 PLAC8Q9NZF1 115 aa8.85□□□□□ -0.99
VAMP1-208ENST00000544432 PKIGQ9Y2B9 76 aa8.85□□□□□ -0.99
VAMP1-208ENST00000544432 A0A087WYN8 130 aa8.84□□□□□ -0.99
VAMP1-208ENST00000544432 TRAV13-1A0A0B4J241 112 aa8.84□□□□□ -0.99
VAMP1-208ENST00000544432 KRTAP29-1A8MX34 341 aaPredicted RBP8.84□□□□□ -0.99
VAMP1-208ENST00000544432 ZNF561-AS1K7EIQ3 104 aa8.84□□□□□ -0.99
VAMP1-208ENST00000544432 RAB5AP20339 215 aa8.84□□□□□ -0.99
VAMP1-208ENST00000544432 PRSS3P2Q8NHM4 247 aa8.84□□□□□ -0.99
VAMP1-208ENST00000544432 FAM104AQ969W3 186 aa8.84□□□□□ -0.99
VAMP1-208ENST00000544432 TMEM218A2RU14 115 aa8.83□□□□□ -1
VAMP1-208ENST00000544432 CHTF8P0CG12 524 aa8.83□□□□□ -1
VAMP1-208ENST00000544432 MALP21145 153 aa8.83□□□□□ -1
VAMP1-208ENST00000544432 RNASE13Q5GAN3 156 aaKnown RBP8.83□□□□□ -1
VAMP1-208ENST00000544432 PYGO1Q9Y3Y4 419 aa8.83□□□□□ -1
VAMP1-208ENST00000544432 PKHD1L1Q86WI1 4243 aa8.83□□□□□ -1
VAMP1-208ENST00000544432 ADCYAP1P18509 176 aa8.82□□□□□ -1
VAMP1-208ENST00000544432 SYCNQ0VAF6 134 aa8.82□□□□□ -1
VAMP1-208ENST00000544432 CARD19Q96LW7 228 aa8.82□□□□□ -1
VAMP1-208ENST00000544432 CTDSP1Q9GZU7 261 aa8.82□□□□□ -1
VAMP1-208ENST00000544432 LINC00474Q9P2X8 69 aa8.82□□□□□ -1
VAMP1-208ENST00000544432 MAP1LC3AQ9H492 121 aa8.81□□□□□ -1
VAMP1-208ENST00000544432 IGLV4-69A0A075B6H9 119 aa8.8□□□□□ -1
VAMP1-208ENST00000544432 TRAV9-1A0A075B6T8 112 aa8.8□□□□□ -1
VAMP1-208ENST00000544432 J3QL48 77 aa8.8□□□□□ -1
VAMP1-208ENST00000544432 K7EMI3 77 aa8.8□□□□□ -1
VAMP1-208ENST00000544432 APOMO95445 188 aa8.8□□□□□ -1
VAMP1-208ENST00000544432 Q8N8P6 123 aa8.8□□□□□ -1
VAMP1-208ENST00000544432 LINC00526Q96FQ7 95 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms