RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 K7EQD1 137 aa9.96□□□□□ -0.82
MSH2-206ENST00000543555 K7ERU9 68 aa9.96□□□□□ -0.82
MSH2-206ENST00000543555 IGHV3-30-3P0DP02 117 aa9.96□□□□□ -0.82
MSH2-206ENST00000543555 C16orf74Q96GX8 76 aa9.96□□□□□ -0.82
MSH2-206ENST00000543555 KRTAP10-3P60369 221 aa9.95□□□□□ -0.82
MSH2-206ENST00000543555 RPL36AP83881 106 aaKnown RBP9.95□□□□□ -0.82
MSH2-206ENST00000543555 RNF151Q2KHN1 245 aa9.95□□□□□ -0.82
MSH2-206ENST00000543555 RPL36ALQ969Q0 106 aaKnown RBP9.95□□□□□ -0.82
MSH2-206ENST00000543555 C1QTNF4Q9BXJ3 329 aa9.95□□□□□ -0.82
MSH2-206ENST00000543555 PKD1L1Q8TDX9 2849 aa9.95□□□□□ -0.82
MSH2-206ENST00000543555 PLAC8L1A1L4L8 177 aa9.95□□□□□ -0.82
MSH2-206ENST00000543555 APOMO95445 188 aa9.94□□□□□ -0.82
MSH2-206ENST00000543555 NDUFA11Q86Y39 141 aa9.94□□□□□ -0.82
MSH2-206ENST00000543555 C10orf126Q8N4M7 172 aa9.94□□□□□ -0.82
MSH2-206ENST00000543555 CSNK1G2-AS1Q8NCQ2 148 aa9.94□□□□□ -0.82
MSH2-206ENST00000543555 TRAV8-3A0A0A6YYJ7 113 aa9.93□□□□□ -0.82
MSH2-206ENST00000543555 IGHV1-58A0A0C4DH39 117 aa9.93□□□□□ -0.82
MSH2-206ENST00000543555 TSPAN13O95857 204 aa9.93□□□□□ -0.82
MSH2-206ENST00000543555 DGAT2L7PQ6IED9 249 aa9.93□□□□□ -0.82
MSH2-206ENST00000543555 DAZ4Q86SG3 579 aaKnown RBP9.93□□□□□ -0.82
MSH2-206ENST00000543555 PRIMA1Q86XR5 153 aa9.93□□□□□ -0.82
MSH2-206ENST00000543555 DAZ3Q9NR90 486 aaKnown RBP9.93□□□□□ -0.82
MSH2-206ENST00000543555 A0A0J9YXY3 114 aa9.92□□□□□ -0.82
MSH2-206ENST00000543555 H3BMG7 143 aa9.92□□□□□ -0.82
MSH2-206ENST00000543555 CFC1BP0CG36 223 aa9.92□□□□□ -0.82
MSH2-206ENST00000543555 CFC1P0CG37 223 aa9.92□□□□□ -0.82
MSH2-206ENST00000543555 UBE2D3P61077 147 aa9.92□□□□□ -0.82
MSH2-206ENST00000543555 UBE2D2P62837 147 aa9.92□□□□□ -0.82
MSH2-206ENST00000543555 GEMIN7Q9H840 131 aaKnown RBP9.92□□□□□ -0.82
MSH2-206ENST00000543555 GAGE12JA6NER3 117 aa9.91□□□□□ -0.82
MSH2-206ENST00000543555 TMEM238C9JI98 176 aa9.91□□□□□ -0.82
MSH2-206ENST00000543555 GAGE7O76087 117 aa9.91□□□□□ -0.82
MSH2-206ENST00000543555 PF4P02776 101 aa9.91□□□□□ -0.82
MSH2-206ENST00000543555 GAGE12FP0CL80 117 aa9.91□□□□□ -0.82
MSH2-206ENST00000543555 GAGE12GP0CL81 117 aa9.91□□□□□ -0.82
MSH2-206ENST00000543555 GAGE12IP0CL82 117 aa9.91□□□□□ -0.82
MSH2-206ENST00000543555 GAGE4Q13068 117 aa9.91□□□□□ -0.82
MSH2-206ENST00000543555 GAGE5Q13069 117 aa9.91□□□□□ -0.82
MSH2-206ENST00000543555 GAGE13Q4V321 117 aa9.91□□□□□ -0.82
MSH2-206ENST00000543555 VSIG2Q96IQ7 327 aa9.91□□□□□ -0.82
MSH2-206ENST00000543555 NTM-AS1Q6ZSK4 140 aa9.91□□□□□ -0.82
MSH2-206ENST00000543555 OVOL2Q9BRP0 275 aa9.91□□□□□ -0.82
MSH2-206ENST00000543555 TRGV2A0A075B6R0 118 aa9.9□□□□□ -0.82
MSH2-206ENST00000543555 F8W1H4 67 aa9.9□□□□□ -0.82
MSH2-206ENST00000543555 SPINK8P0C7L1 97 aa9.9□□□□□ -0.82
MSH2-206ENST00000543555 LINC00694P0DN24 101 aa9.9□□□□□ -0.82
MSH2-206ENST00000543555 LINC00482Q8N8I6 264 aa9.9□□□□□ -0.82
MSH2-206ENST00000543555 TIRAPP58753 221 aa9.9□□□□□ -0.82
MSH2-206ENST00000543555 A4D1N5 150 aa9.9□□□□□ -0.83
MSH2-206ENST00000543555 IGLV5-45A0A087WSX0 123 aa9.89□□□□□ -0.83
MSH2-206ENST00000543555 SBSPONQ8IVN8 264 aa9.89□□□□□ -0.83
MSH2-206ENST00000543555 VPS25Q9BRG1 176 aa9.89□□□□□ -0.83
MSH2-206ENST00000543555 CDKN2A-AS1Q9UH64 79 aa9.89□□□□□ -0.83
MSH2-206ENST00000543555 NDUFA12Q9UI09 145 aa9.89□□□□□ -0.83
MSH2-206ENST00000543555 CSDC2Q9Y534 153 aaKnown RBP9.89□□□□□ -0.83
MSH2-206ENST00000543555 KRTAP24-1Q3LI83 254 aa9.89□□□□□ -0.83
MSH2-206ENST00000543555 MUSTN1Q8IVN3 82 aa9.89□□□□□ -0.83
MSH2-206ENST00000543555 CIDEAO60543 219 aa9.88□□□□□ -0.83
MSH2-206ENST00000543555 RPL24P83731 157 aaKnown RBP9.88□□□□□ -0.83
MSH2-206ENST00000543555 SPATA3Q8NHX4 192 aa9.88□□□□□ -0.83
MSH2-206ENST00000543555 LITAFQ99732 161 aa9.88□□□□□ -0.83
MSH2-206ENST00000543555 A8MZ25 164 aa9.88□□□□□ -0.83
MSH2-206ENST00000543555 G3V4G9 280 aa9.88□□□□□ -0.83
MSH2-206ENST00000543555 WFDC2Q14508 124 aa9.88□□□□□ -0.83
MSH2-206ENST00000543555 PRO1854Q9UHT4 67 aa9.88□□□□□ -0.83
MSH2-206ENST00000543555 LOC107984156A0A0G2JMH3 177 aa9.88□□□□□ -0.83
MSH2-206ENST00000543555 TRBV6-4A0A1B0GX49 114 aa9.88□□□□□ -0.83
MSH2-206ENST00000543555 SFTA2Q6UW10 78 aa9.88□□□□□ -0.83
MSH2-206ENST00000543555 ARL17AQ8IVW1 177 aa9.88□□□□□ -0.83
MSH2-206ENST00000543555 PRO0461Q9UI25 63 aa9.87□□□□□ -0.83
MSH2-206ENST00000543555 COX6A2Q02221 97 aa9.87□□□□□ -0.83
MSH2-206ENST00000543555 ZFAND6Q6FIF0 208 aa9.87□□□□□ -0.83
MSH2-206ENST00000543555 GTSF1LQ9H1H1 148 aa9.87□□□□□ -0.83
MSH2-206ENST00000543555 EIF4EBP3O60516 100 aaPredicted RBP9.86□□□□□ -0.83
MSH2-206ENST00000543555 HERVK_113P63121 156 aa9.86□□□□□ -0.83
MSH2-206ENST00000543555 LINC00242Q5T6M2 205 aa9.86□□□□□ -0.83
MSH2-206ENST00000543555 LYRM7Q5U5X0 104 aa9.86□□□□□ -0.83
MSH2-206ENST00000543555 FAM19A3Q7Z5A8 133 aa9.86□□□□□ -0.83
MSH2-206ENST00000543555 LOC100131303A0A0U1RQF7 123 aa9.86□□□□□ -0.83
MSH2-206ENST00000543555 TEX48A0A1B0GUV7 120 aa9.86□□□□□ -0.83
MSH2-206ENST00000543555 SMAGPQ0VAQ4 97 aa9.86□□□□□ -0.83
MSH2-206ENST00000543555 A0A0B4J2C4 111 aa9.85□□□□□ -0.83
MSH2-206ENST00000543555 TRGV4A0A0C4DH28 118 aa9.85□□□□□ -0.83
MSH2-206ENST00000543555 MTURNQ8N3F0 131 aa9.85□□□□□ -0.83
MSH2-206ENST00000543555 TMEM243Q9BU79 118 aa9.85□□□□□ -0.83
MSH2-206ENST00000543555 SPANXDQ9BXN6 97 aa9.85□□□□□ -0.83
MSH2-206ENST00000543555 CDC42SE2Q9NRR3 84 aa9.85□□□□□ -0.83
MSH2-206ENST00000543555 SPANXCQ9NY87 97 aa9.85□□□□□ -0.83
MSH2-206ENST00000543555 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.85□□□□□ -0.83
MSH2-206ENST00000543555 TMEM101Q96IK0 257 aa9.85□□□□□ -0.83
MSH2-206ENST00000543555 PSMB2P49721 201 aa9.84□□□□□ -0.83
MSH2-206ENST00000543555 ADAMTSL4-AS1Q5T5F5 129 aa9.84□□□□□ -0.83
MSH2-206ENST00000543555 FHL2Q14192 279 aa9.84□□□□□ -0.83
MSH2-206ENST00000543555 TRAV13-1A0A0B4J241 112 aa9.83□□□□□ -0.84
MSH2-206ENST00000543555 UBE2L6O14933 153 aa9.83□□□□□ -0.84
MSH2-206ENST00000543555 IGHV3-33P01772 117 aa9.83□□□□□ -0.84
MSH2-206ENST00000543555 IGLV5-39A0A0G2JS06 123 aa9.83□□□□□ -0.84
MSH2-206ENST00000543555 NOTCH1P46531 2555 aa9.83□□□□□ -0.84
MSH2-206ENST00000543555 NDUFA1O15239 70 aa9.82□□□□□ -0.84
MSH2-206ENST00000543555 PRSS2P07478 247 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms