RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 TIMM17BO60830 172 aa5.18□□□□□ -1.58
SRGAP1-206ENST00000543397 TRBV6-1A0A0K0K1D8 114 aa5.17□□□□□ -1.58
SRGAP1-206ENST00000543397 CRIP3Q6Q6R5 217 aa5.17□□□□□ -1.58
SRGAP1-206ENST00000543397 COX7B2Q8TF08 81 aa5.17□□□□□ -1.58
SRGAP1-206ENST00000543397 RPL39P62891 51 aaKnown RBP5.17□□□□□ -1.58
SRGAP1-206ENST00000543397 C3orf22Q8N5N4 141 aa5.17□□□□□ -1.58
SRGAP1-206ENST00000543397 Q8N6K4 173 aa5.17□□□□□ -1.58
SRGAP1-206ENST00000543397 TRAV10A0A0B4J240 114 aa5.17□□□□□ -1.58
SRGAP1-206ENST00000543397 COX8AP10176 69 aa5.17□□□□□ -1.58
SRGAP1-206ENST00000543397 C10orf91Q5T1B1 145 aa5.17□□□□□ -1.58
SRGAP1-206ENST00000543397 GTSF1Q8WW33 167 aa5.17□□□□□ -1.58
SRGAP1-206ENST00000543397 DSCR8Q96T75 97 aa5.17□□□□□ -1.58
SRGAP1-206ENST00000543397 ZNF295-AS1Q8N0V1 137 aa5.17□□□□□ -1.58
SRGAP1-206ENST00000543397 DEFB105AQ8NG35 78 aa5.17□□□□□ -1.58
SRGAP1-206ENST00000543397 TMEM256-PLSCR3K7ERE1 68 aa5.17□□□□□ -1.58
SRGAP1-206ENST00000543397 C12orf74Q32Q52 190 aa5.17□□□□□ -1.58
SRGAP1-206ENST00000543397 C6orf99Q4VX62 202 aa5.16□□□□□ -1.58
SRGAP1-206ENST00000543397 A0A1W2PPR1 153 aa5.16□□□□□ -1.58
SRGAP1-206ENST00000543397 PRB2P02812 416 aaPredicted RBP5.16□□□□□ -1.58
SRGAP1-206ENST00000543397 CRYGDP07320 174 aa5.16□□□□□ -1.58
SRGAP1-206ENST00000543397 IGHV4-4A0A075B6R2 117 aa5.16□□□□□ -1.58
SRGAP1-206ENST00000543397 BVES-AS1Q5T3Y7 98 aa5.16□□□□□ -1.58
SRGAP1-206ENST00000543397 SND1-IT1Q9HBX3 110 aa5.16□□□□□ -1.58
SRGAP1-206ENST00000543397 ATOX1O00244 68 aa5.16□□□□□ -1.58
SRGAP1-206ENST00000543397 Q6ZS46 218 aa5.16□□□□□ -1.58
SRGAP1-206ENST00000543397 C2orf48Q96LS8 159 aa5.16□□□□□ -1.58
SRGAP1-206ENST00000543397 USP34Q70CQ2 3546 aa5.15□□□□□ -1.58
SRGAP1-206ENST00000543397 IGKV2-24A0A0C4DH68 120 aa5.15□□□□□ -1.58
SRGAP1-206ENST00000543397 UBL5Q9BZL1 73 aa5.15□□□□□ -1.58
SRGAP1-206ENST00000543397 TP53TG3Q9ULZ0 132 aa5.15□□□□□ -1.58
SRGAP1-206ENST00000543397 CELA1Q9UNI1 258 aa5.15□□□□□ -1.58
SRGAP1-206ENST00000543397 ACANP16112 2415 aa5.15□□□□□ -1.58
SRGAP1-206ENST00000543397 CDIP1Q9H305 208 aa5.15□□□□□ -1.58
SRGAP1-206ENST00000543397 C18orf65Q6ZTR6 163 aa5.15□□□□□ -1.59
SRGAP1-206ENST00000543397 LINC00173Q6ZV60 143 aa5.15□□□□□ -1.59
SRGAP1-206ENST00000543397 C20orf203Q8NBC4 194 aa5.15□□□□□ -1.59
SRGAP1-206ENST00000543397 KIAA1549Q9HCM3 1950 aa5.15□□□□□ -1.59
SRGAP1-206ENST00000543397 IGLV1-40P01703 118 aa5.15□□□□□ -1.59
SRGAP1-206ENST00000543397 EIF4EBP1Q13541 118 aaPredicted RBP5.15□□□□□ -1.59
SRGAP1-206ENST00000543397 IGLC3P0DOY3 106 aa5.14□□□□□ -1.59
SRGAP1-206ENST00000543397 ZNF80P51504 273 aaPredicted RBP5.14□□□□□ -1.59
SRGAP1-206ENST00000543397 HAMPP81172 84 aa5.14□□□□□ -1.59
SRGAP1-206ENST00000543397 PIK3CD-AS1Q5SR53 167 aa5.14□□□□□ -1.59
SRGAP1-206ENST00000543397 Q6ZUT4 128 aa5.14□□□□□ -1.59
SRGAP1-206ENST00000543397 IGHV4-28A0A0C4DH34 117 aa5.14□□□□□ -1.59
SRGAP1-206ENST00000543397 C9orf118A6NHY6 69 aa5.14□□□□□ -1.59
SRGAP1-206ENST00000543397 LINC00269Q8N2A0 174 aa5.14□□□□□ -1.59
SRGAP1-206ENST00000543397 DSCAML1Q8TD84 2053 aa5.14□□□□□ -1.59
SRGAP1-206ENST00000543397 WFDC10AQ9H1F0 79 aa5.14□□□□□ -1.59
SRGAP1-206ENST00000543397 HIGD2BQ4VC39 106 aa5.14□□□□□ -1.59
SRGAP1-206ENST00000543397 C11orf1Q9H5F2 150 aa5.14□□□□□ -1.59
SRGAP1-206ENST00000543397 TANC2Q9HCD6 1990 aa5.14□□□□□ -1.59
SRGAP1-206ENST00000543397 GOLGB1Q14789 3259 aaKnown RBP5.13□□□□□ -1.59
SRGAP1-206ENST00000543397 C19orf71A6NCJ1 209 aa5.13□□□□□ -1.59
SRGAP1-206ENST00000543397 RPS28P62857 69 aaKnown RBP5.13□□□□□ -1.59
SRGAP1-206ENST00000543397 FAM30AQ9NZY2 134 aa5.13□□□□□ -1.59
SRGAP1-206ENST00000543397 MT-ATP8P03928 68 aa5.13□□□□□ -1.59
SRGAP1-206ENST00000543397 CEND1Q8N111 149 aa5.13□□□□□ -1.59
SRGAP1-206ENST00000543397 P0DMU3 169 aa5.13□□□□□ -1.59
SRGAP1-206ENST00000543397 FAM231AP0DMU4 169 aa5.13□□□□□ -1.59
SRGAP1-206ENST00000543397 FAM231CP0DMU5 169 aa5.13□□□□□ -1.59
SRGAP1-206ENST00000543397 LINC01545Q5VT33 79 aa5.13□□□□□ -1.59
SRGAP1-206ENST00000543397 SEC61BP60468 96 aaKnown RBP5.13□□□□□ -1.59
SRGAP1-206ENST00000543397 SCXQ7RTU7 201 aa5.13□□□□□ -1.59
SRGAP1-206ENST00000543397 LY6G6CO95867 125 aa5.12□□□□□ -1.59
SRGAP1-206ENST00000543397 IGHV4-30-4P0DP06 118 aa5.12□□□□□ -1.59
SRGAP1-206ENST00000543397 GDF5OSQ5U4N7 250 aa5.12□□□□□ -1.59
SRGAP1-206ENST00000543397 TOMM6Q96B49 74 aa5.12□□□□□ -1.59
SRGAP1-206ENST00000543397 hADV29S1A0JD25 119 aa5.12□□□□□ -1.59
SRGAP1-206ENST00000543397 OPRPNQ99935 248 aaPredicted RBP5.12□□□□□ -1.59
SRGAP1-206ENST00000543397 IGLV2-18A0A075B6J9 118 aa5.12□□□□□ -1.59
SRGAP1-206ENST00000543397 CFC1BP0CG36 223 aa5.12□□□□□ -1.59
SRGAP1-206ENST00000543397 CFC1P0CG37 223 aa5.12□□□□□ -1.59
SRGAP1-206ENST00000543397 CARD19Q96LW7 228 aa5.12□□□□□ -1.59
SRGAP1-206ENST00000543397 ORMDL1Q9P0S3 153 aa5.12□□□□□ -1.59
SRGAP1-206ENST00000543397 F8P00451 2351 aa5.12□□□□□ -1.59
SRGAP1-206ENST00000543397 TRBV6-4A0A1B0GX49 114 aa5.12□□□□□ -1.59
SRGAP1-206ENST00000543397 SOSTDC1Q6X4U4 206 aa5.12□□□□□ -1.59
SRGAP1-206ENST00000543397 PCP2Q8IVA1 136 aa5.12□□□□□ -1.59
SRGAP1-206ENST00000543397 TRAV12-1A0A0B4J245 112 aa5.11□□□□□ -1.59
SRGAP1-206ENST00000543397 CEMP1Q6PRD7 247 aaPredicted RBP5.11□□□□□ -1.59
SRGAP1-206ENST00000543397 ZFAND2AQ8N6M9 145 aa5.11□□□□□ -1.59
SRGAP1-206ENST00000543397 KPRPQ5T749 579 aaPredicted RBP5.11□□□□□ -1.59
SRGAP1-206ENST00000543397 NFE4Q86UQ8 179 aa5.11□□□□□ -1.59
SRGAP1-206ENST00000543397 CHCHD10Q8WYQ3 142 aaPredicted RBP5.11□□□□□ -1.59
SRGAP1-206ENST00000543397 H0YGX0 51 aa5.11□□□□□ -1.59
SRGAP1-206ENST00000543397 NCR3O14931 201 aa5.11□□□□□ -1.59
SRGAP1-206ENST00000543397 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.1□□□□□ -1.59
SRGAP1-206ENST00000543397 CXCL6P80162 114 aa5.1□□□□□ -1.59
SRGAP1-206ENST00000543397 HCFC1P51610 2035 aa5.1□□□□□ -1.59
SRGAP1-206ENST00000543397 M0R2N4 97 aa5.1□□□□□ -1.59
SRGAP1-206ENST00000543397 CFAP126Q5VTH2 177 aa5.1□□□□□ -1.59
SRGAP1-206ENST00000543397 MIR7-3HGQ8N6C7 128 aa5.1□□□□□ -1.59
SRGAP1-206ENST00000543397 TRBV6-8A0A0A6YYG3 113 aa5.1□□□□□ -1.59
SRGAP1-206ENST00000543397 C11orf86A6NJI1 115 aa5.1□□□□□ -1.59
SRGAP1-206ENST00000543397 UFSP1Q6NVU6 142 aa5.1□□□□□ -1.59
SRGAP1-206ENST00000543397 DIRC1Q969H9 104 aa5.1□□□□□ -1.59
SRGAP1-206ENST00000543397 REG3GQ6UW15 175 aa5.1□□□□□ -1.59
SRGAP1-206ENST00000543397 B9D2Q9BPU9 175 aa5.1□□□□□ -1.59
SRGAP1-206ENST00000543397 IGHV1-58A0A0C4DH39 117 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms