RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 NDUFA6P56556 154 aa15.61■□□□□ 0.09
HOMER3-205ENST00000542541 ZNF664Q8N3J9 261 aa15.61■□□□□ 0.09
HOMER3-205ENST00000542541 CDC42SE2Q9NRR3 84 aa15.61■□□□□ 0.09
HOMER3-205ENST00000542541 M0R2N4 97 aa15.61■□□□□ 0.09
HOMER3-205ENST00000542541 LINC00310P59036 64 aa15.61■□□□□ 0.09
HOMER3-205ENST00000542541 PMCHL1Q16048 86 aa15.61■□□□□ 0.09
HOMER3-205ENST00000542541 ERASQ7Z444 233 aa15.61■□□□□ 0.09
HOMER3-205ENST00000542541 LINC00269Q8N2A0 174 aa15.61■□□□□ 0.09
HOMER3-205ENST00000542541 SCGB3A1Q96QR1 104 aa15.61■□□□□ 0.09
HOMER3-205ENST00000542541 CRPP02741 224 aa15.6■□□□□ 0.09
HOMER3-205ENST00000542541 MRPS36P82909 103 aaKnown RBP15.6■□□□□ 0.09
HOMER3-205ENST00000542541 COA6Q5JTJ3 125 aaKnown RBP15.6■□□□□ 0.09
HOMER3-205ENST00000542541 Q6ZR54 194 aa15.6■□□□□ 0.09
HOMER3-205ENST00000542541 TIMM17AQ99595 171 aa15.6■□□□□ 0.09
HOMER3-205ENST00000542541 A0A096LNJ9 63 aa15.59■□□□□ 0.09
HOMER3-205ENST00000542541 TRAV8-3A0A0A6YYJ7 113 aa15.59■□□□□ 0.09
HOMER3-205ENST00000542541 IGIPA6NJ69 53 aa15.59■□□□□ 0.09
HOMER3-205ENST00000542541 PAPPA-AS1Q5QFB9 102 aa15.59■□□□□ 0.09
HOMER3-205ENST00000542541 TMEM141Q96I45 108 aa15.59■□□□□ 0.09
HOMER3-205ENST00000542541 KRTAP1-5Q9BYS1 174 aa15.59■□□□□ 0.09
HOMER3-205ENST00000542541 RYR2Q92736 4967 aa15.59■□□□□ 0.09
HOMER3-205ENST00000542541 REG3AQ06141 175 aa15.58■□□□□ 0.09
HOMER3-205ENST00000542541 UBE2WQ96B02 151 aa15.58■□□□□ 0.09
HOMER3-205ENST00000542541 PRR34Q9NV39 138 aa15.58■□□□□ 0.09
HOMER3-205ENST00000542541 NUPR1O60356 82 aa15.57■□□□□ 0.08
HOMER3-205ENST00000542541 Q6ZN92 141 aa15.57■□□□□ 0.08
HOMER3-205ENST00000542541 FAM19A2Q8N3H0 131 aa15.57■□□□□ 0.08
HOMER3-205ENST00000542541 KMT2AQ03164 3969 aa15.57■□□□□ 0.08
HOMER3-205ENST00000542541 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.56■□□□□ 0.08
HOMER3-205ENST00000542541 MIAQ16674 131 aa15.56■□□□□ 0.08
HOMER3-205ENST00000542541 PDZD11Q5EBL8 140 aa15.56■□□□□ 0.08
HOMER3-205ENST00000542541 Q6ZUT4 128 aa15.56■□□□□ 0.08
HOMER3-205ENST00000542541 DNAH6Q9C0G6 4158 aa15.56■□□□□ 0.08
HOMER3-205ENST00000542541 RYR3Q15413 4870 aa15.55■□□□□ 0.08
HOMER3-205ENST00000542541 IGLV4-3A0A075B6K6 122 aa15.55■□□□□ 0.08
HOMER3-205ENST00000542541 S100A6P06703 90 aa15.55■□□□□ 0.08
HOMER3-205ENST00000542541 ENHOQ6UWT2 76 aa15.55■□□□□ 0.08
HOMER3-205ENST00000542541 OPRPNQ99935 248 aaPredicted RBP15.55■□□□□ 0.08
HOMER3-205ENST00000542541 ATP5LO75964 103 aa15.54■□□□□ 0.08
HOMER3-205ENST00000542541 CLPSL2Q6UWE3 100 aa15.54■□□□□ 0.08
HOMER3-205ENST00000542541 NFE4Q86UQ8 179 aa15.54■□□□□ 0.08
HOMER3-205ENST00000542541 VCX2Q9H322 139 aa15.54■□□□□ 0.08
HOMER3-205ENST00000542541 FAM104AQ969W3 186 aa15.54■□□□□ 0.08
HOMER3-205ENST00000542541 RMI2Q96E14 147 aa15.54■□□□□ 0.08
HOMER3-205ENST00000542541 TRAV8-4A0A0B4J246 113 aa15.53■□□□□ 0.08
HOMER3-205ENST00000542541 TEX43Q6ZNM6 134 aa15.53■□□□□ 0.08
HOMER3-205ENST00000542541 Q9HAA7 133 aa15.53■□□□□ 0.08
HOMER3-205ENST00000542541 IGKV3OR2-268A0A0C4DH90 116 aa15.52■□□□□ 0.08
HOMER3-205ENST00000542541 RNASE13Q5GAN3 156 aaKnown RBP15.52■□□□□ 0.08
HOMER3-205ENST00000542541 LEPROTL1O95214 131 aa15.51■□□□□ 0.07
HOMER3-205ENST00000542541 C1orf134Q5TEV5 83 aa15.51■□□□□ 0.07
HOMER3-205ENST00000542541 C6orf223Q8N319 242 aa15.51■□□□□ 0.07
HOMER3-205ENST00000542541 CCL25O15444 150 aa15.5■□□□□ 0.07
HOMER3-205ENST00000542541 C2orf88Q9BSF0 95 aa15.5■□□□□ 0.07
HOMER3-205ENST00000542541 COX11Q9Y6N1 276 aa15.5■□□□□ 0.07
HOMER3-205ENST00000542541 SS18Q15532 418 aa15.5■□□□□ 0.07
HOMER3-205ENST00000542541 AMELXQ99217 191 aa15.5■□□□□ 0.07
HOMER3-205ENST00000542541 C1orf43Q9BWL3 253 aa15.5■□□□□ 0.07
HOMER3-205ENST00000542541 TM2D2Q9BX73 214 aa15.5■□□□□ 0.07
HOMER3-205ENST00000542541 HSPB8Q9UJY1 196 aa15.5■□□□□ 0.07
HOMER3-205ENST00000542541 LINC00959A0A1B0GUT2 108 aa15.49■□□□□ 0.07
HOMER3-205ENST00000542541 IFITM10A6NMD0 228 aa15.49■□□□□ 0.07
HOMER3-205ENST00000542541 IFI27L1Q96BM0 104 aa15.48■□□□□ 0.07
HOMER3-205ENST00000542541 IGKV2D-24A0A075B6R9 120 aa15.47■□□□□ 0.07
HOMER3-205ENST00000542541 TRAV13-1A0A0B4J241 112 aa15.47■□□□□ 0.07
HOMER3-205ENST00000542541 BAALCQ8WXS3 180 aa15.47■□□□□ 0.07
HOMER3-205ENST00000542541 FABP4P15090 132 aa15.46■□□□□ 0.07
HOMER3-205ENST00000542541 PMVKQ15126 192 aa15.46■□□□□ 0.07
HOMER3-205ENST00000542541 IGLV10-54A0A075B6I4 117 aa15.46■□□□□ 0.06
HOMER3-205ENST00000542541 PACRGQ96M98 296 aaPredicted RBP15.46■□□□□ 0.06
HOMER3-205ENST00000542541 PRSS1P07477 247 aa15.45■□□□□ 0.06
HOMER3-205ENST00000542541 LINC00173Q6ZV60 143 aa15.45■□□□□ 0.06
HOMER3-205ENST00000542541 CST9LQ9H4G1 147 aa15.45■□□□□ 0.06
HOMER3-205ENST00000542541 CHCHD10Q8WYQ3 142 aaPredicted RBP15.44■□□□□ 0.06
HOMER3-205ENST00000542541 PSCAO43653 123 aa15.43■□□□□ 0.06
HOMER3-205ENST00000542541 ZC2HC1BQ5TFG8 222 aa15.43■□□□□ 0.06
HOMER3-205ENST00000542541 S100A2P29034 98 aa15.43■□□□□ 0.06
HOMER3-205ENST00000542541 UBE2D1P51668 147 aa15.42■□□□□ 0.06
HOMER3-205ENST00000542541 SNRPEP62304 92 aaKnown RBP15.42■□□□□ 0.06
HOMER3-205ENST00000542541 PRSS29PA6NIE9 313 aa15.41■□□□□ 0.06
HOMER3-205ENST00000542541 SEC11AP67812 179 aa15.41■□□□□ 0.06
HOMER3-205ENST00000542541 XCL1P47992 114 aa15.4■□□□□ 0.06
HOMER3-205ENST00000542541 CD164L2Q6UWJ8 174 aa15.4■□□□□ 0.06
HOMER3-205ENST00000542541 Q6ZRN7 208 aaPredicted RBP15.4■□□□□ 0.06
HOMER3-205ENST00000542541 HIST3H2BBQ8N257 126 aa15.4■□□□□ 0.06
HOMER3-205ENST00000542541 MAP1LC3CQ9BXW4 147 aa15.4■□□□□ 0.06
HOMER3-205ENST00000542541 TRAV12-1A0A0B4J245 112 aa15.39■□□□□ 0.05
HOMER3-205ENST00000542541 GAGE12HA6NDE8 117 aa15.39■□□□□ 0.05
HOMER3-205ENST00000542541 C5orf52A6NGY3 159 aa15.39■□□□□ 0.05
HOMER3-205ENST00000542541 LINC00242Q5T6M2 205 aa15.38■□□□□ 0.05
HOMER3-205ENST00000542541 KRTAP26-1Q6PEX3 210 aa15.38■□□□□ 0.05
HOMER3-205ENST00000542541 FAM19A3Q7Z5A8 133 aa15.38■□□□□ 0.05
HOMER3-205ENST00000542541 TMA7Q9Y2S6 64 aaKnown RBP15.38■□□□□ 0.05
HOMER3-205ENST00000542541 DNAH2Q9P225 4427 aa15.37■□□□□ 0.05
HOMER3-205ENST00000542541 GEMIN7Q9H840 131 aaKnown RBP15.36■□□□□ 0.05
HOMER3-205ENST00000542541 HERVK_113P63121 156 aa15.35■□□□□ 0.05
HOMER3-205ENST00000542541 A0A0J9YXV3 536 aa15.35■□□□□ 0.05
HOMER3-205ENST00000542541 H0Y8G0 127 aa15.35■□□□□ 0.05
HOMER3-205ENST00000542541 RTL8CO15255 209 aa15.35■□□□□ 0.05
HOMER3-205ENST00000542541 FOXI1Q12951 378 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms