RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.51□□□□□ -0.898e-7■■■■■ 27.5
DNMT1-203ENST00000540357 Q6JHZ5 121 aa9.51□□□□□ -0.89
DNMT1-203ENST00000540357 Q6ZTI0 123 aa9.51□□□□□ -0.89
DNMT1-203ENST00000540357 LINC00694P0DN24 101 aa9.51□□□□□ -0.89
DNMT1-203ENST00000540357 PDE6GP18545 87 aa9.51□□□□□ -0.89
DNMT1-203ENST00000540357 KLK9Q2XQG4 91 aa9.51□□□□□ -0.89
DNMT1-203ENST00000540357 HTTP42858 3142 aa9.5□□□□□ -0.89
DNMT1-203ENST00000540357 GYPEP15421 78 aa9.5□□□□□ -0.89
DNMT1-203ENST00000540357 LINC00242Q5T6M2 205 aa9.49□□□□□ -0.89
DNMT1-203ENST00000540357 ZNF561-AS1K7EIQ3 104 aa9.49□□□□□ -0.89
DNMT1-203ENST00000540357 NCR3O14931 201 aa9.49□□□□□ -0.89
DNMT1-203ENST00000540357 DAD1P61803 113 aa9.49□□□□□ -0.89
DNMT1-203ENST00000540357 ARHGAP32A7KAX9 2087 aa9.49□□□□□ -0.89
DNMT1-203ENST00000540357 USP17L23D6RBM5 183 aa9.48□□□□□ -0.89
DNMT1-203ENST00000540357 RPL28P46779 137 aaKnown RBP9.48□□□□□ -0.89
DNMT1-203ENST00000540357 DEFB114Q30KQ6 69 aa9.48□□□□□ -0.89
DNMT1-203ENST00000540357 UPK3BQ9BT76 320 aa9.48□□□□□ -0.89
DNMT1-203ENST00000540357 TRAV23DV6A0A075B6W5 121 aa9.48□□□□□ -0.89
DNMT1-203ENST00000540357 NDUFC2O95298 119 aa9.48□□□□□ -0.89
DNMT1-203ENST00000540357 A0A096LPF7 62 aa9.48□□□□□ -0.89
DNMT1-203ENST00000540357 SMIM1B2RUZ4 78 aa9.48□□□□□ -0.89
DNMT1-203ENST00000540357 EDN2P20800 178 aa9.48□□□□□ -0.89
DNMT1-203ENST00000540357 C10orf99Q6UWK7 81 aa9.48□□□□□ -0.89
DNMT1-203ENST00000540357 SMIM11BQ8TCY0 68 aa9.47□□□□□ -0.89
DNMT1-203ENST00000540357 Q96MF0 132 aa9.47□□□□□ -0.89
DNMT1-203ENST00000540357 CDSNQ15517 529 aa9.46□□□□□ -0.89
DNMT1-203ENST00000540357 CDC42SE2Q9NRR3 84 aa9.46□□□□□ -0.89
DNMT1-203ENST00000540357 TRBV6-4A0A1B0GX49 114 aa9.46□□□□□ -0.9
DNMT1-203ENST00000540357 Q6YL49 198 aa9.46□□□□□ -0.9
DNMT1-203ENST00000540357 F5H768 121 aa9.46□□□□□ -0.9
DNMT1-203ENST00000540357 C19orf84I3L1E1 186 aa9.46□□□□□ -0.9
DNMT1-203ENST00000540357 SLPIP03973 132 aa9.46□□□□□ -0.9
DNMT1-203ENST00000540357 CHD7Q9P2D1 2997 aa9.45□□□□□ -0.9
DNMT1-203ENST00000540357 A0A0C4DFX4 3053 aa9.45□□□□□ -0.9
DNMT1-203ENST00000540357 CSDC2Q9Y534 153 aaKnown RBP9.45□□□□□ -0.9
DNMT1-203ENST00000540357 COX6A2Q02221 97 aa9.45□□□□□ -0.9
DNMT1-203ENST00000540357 OTOGLQ3ZCN5 2332 aa9.45□□□□□ -0.9
DNMT1-203ENST00000540357 FAM236DA0A1B0GTK5 79 aa9.44□□□□□ -0.9
DNMT1-203ENST00000540357 FAM236CP0DP71 79 aa9.44□□□□□ -0.9
DNMT1-203ENST00000540357 FHL3Q13643 280 aa9.44□□□□□ -0.9
DNMT1-203ENST00000540357 C20orf197Q8N268 126 aa9.44□□□□□ -0.9
DNMT1-203ENST00000540357 ENHOQ6UWT2 76 aa9.44□□□□□ -0.9
DNMT1-203ENST00000540357 TRBV6-8A0A0A6YYG3 113 aa9.43□□□□□ -0.9
DNMT1-203ENST00000540357 APOC4P55056 127 aa9.42□□□□□ -0.9
DNMT1-203ENST00000540357 NACAE9PAV3 2078 aa9.42□□□□□ -0.9
DNMT1-203ENST00000540357 IGLV10-54A0A075B6I4 117 aa9.42□□□□□ -0.9
DNMT1-203ENST00000540357 ZNF702PQ9H963 129 aa9.42□□□□□ -0.9
DNMT1-203ENST00000540357 ZFHX2Q9C0A1 2572 aaPredicted RBP9.41□□□□□ -0.9
DNMT1-203ENST00000540357 PRM2P04554 102 aa9.41□□□□□ -0.9
DNMT1-203ENST00000540357 BEAN1Q3B7T3 259 aa9.41□□□□□ -0.9
DNMT1-203ENST00000540357 CCL18P55774 89 aa9.41□□□□□ -0.9
DNMT1-203ENST00000540357 NKAPP1Q8N9T2 125 aa9.41□□□□□ -0.9
DNMT1-203ENST00000540357 DIRC1Q969H9 104 aa9.41□□□□□ -0.9
DNMT1-203ENST00000540357 CCKP06307 115 aa9.41□□□□□ -0.9
DNMT1-203ENST00000540357 F8WEM9 126 aa9.4□□□□□ -0.9
DNMT1-203ENST00000540357 DEFB121Q5J5C9 76 aa9.4□□□□□ -0.9
DNMT1-203ENST00000540357 IGLV5-39A0A0G2JS06 123 aa9.4□□□□□ -0.91
DNMT1-203ENST00000540357 PRO0255Q9UI72 69 aa9.39□□□□□ -0.91
DNMT1-203ENST00000540357 SPAG11BQ08648 103 aa9.39□□□□□ -0.91
DNMT1-203ENST00000540357 Q6ZSN1 163 aa9.39□□□□□ -0.91
DNMT1-203ENST00000540357 SMIM9A6NGZ8 99 aa9.39□□□□□ -0.91
DNMT1-203ENST00000540357 C5orf42Q9H799 3197 aa9.38□□□□□ -0.91
DNMT1-203ENST00000540357 CITED2Q99967 270 aaPredicted RBP9.38□□□□□ -0.91
DNMT1-203ENST00000540357 KLK5Q9Y337 293 aaPredicted RBP9.38□□□□□ -0.91
DNMT1-203ENST00000540357 A0A087WYN8 130 aa9.38□□□□□ -0.91
DNMT1-203ENST00000540357 DEFB113Q30KQ7 82 aa9.38□□□□□ -0.91
DNMT1-203ENST00000540357 NRGNQ92686 78 aa9.38□□□□□ -0.91
DNMT1-203ENST00000540357 IGLV5-45A0A087WSX0 123 aa9.37□□□□□ -0.91
DNMT1-203ENST00000540357 DOPEY2Q9Y3R5 2298 aa9.37□□□□□ -0.91
DNMT1-203ENST00000540357 NREPQ16612 68 aa9.37□□□□□ -0.91
DNMT1-203ENST00000540357 LITAFQ99732 161 aa9.37□□□□□ -0.91
DNMT1-203ENST00000540357 C1orf43Q9BWL3 253 aa9.37□□□□□ -0.91
DNMT1-203ENST00000540357 A0A1W2PPR1 153 aa9.37□□□□□ -0.91
DNMT1-203ENST00000540357 MRAPQ8TCY5 172 aa9.37□□□□□ -0.91
DNMT1-203ENST00000540357 SHISA2Q6UWI4 295 aa9.36□□□□□ -0.91
DNMT1-203ENST00000540357 NOTCH3Q9UM47 2321 aa9.36□□□□□ -0.91
DNMT1-203ENST00000540357 COL27A1Q8IZC6 1860 aaPredicted RBP9.36□□□□□ -0.91
DNMT1-203ENST00000540357 LINC00959A0A1B0GUT2 108 aa9.36□□□□□ -0.91
DNMT1-203ENST00000540357 COX7BP24311 80 aa9.36□□□□□ -0.91
DNMT1-203ENST00000540357 CHD9Q3L8U1 2897 aa9.35□□□□□ -0.91
DNMT1-203ENST00000540357 NDUFC2-KCTD14E9PQ53 114 aa9.35□□□□□ -0.91
DNMT1-203ENST00000540357 FUSP35637 526 aaKnown RBP eCLIP9.35□□□□□ -0.91
DNMT1-203ENST00000540357 COX17Q14061 63 aa9.35□□□□□ -0.91
DNMT1-203ENST00000540357 FAM19A5Q7Z5A7 132 aaPredicted RBP9.35□□□□□ -0.91
DNMT1-203ENST00000540357 C6orf99Q4VX62 202 aa9.35□□□□□ -0.91
DNMT1-203ENST00000540357 NDUFC1O43677 76 aa9.35□□□□□ -0.91
DNMT1-203ENST00000540357 NHLRC4P0CG21 123 aaPredicted RBP9.35□□□□□ -0.91
DNMT1-203ENST00000540357 CRYGAP11844 174 aa9.35□□□□□ -0.91
DNMT1-203ENST00000540357 Q8IZM0 81 aa9.35□□□□□ -0.91
DNMT1-203ENST00000540357 CHCHD10Q8WYQ3 142 aaPredicted RBP9.35□□□□□ -0.91
DNMT1-203ENST00000540357 CAMK2N2Q96S95 79 aa9.35□□□□□ -0.91
DNMT1-203ENST00000540357 LINC00269Q8N2A0 174 aa9.34□□□□□ -0.91
DNMT1-203ENST00000540357 ATP5EP56381 51 aaPredicted RBP9.34□□□□□ -0.91
DNMT1-203ENST00000540357 REG3AQ06141 175 aa9.34□□□□□ -0.91
DNMT1-203ENST00000540357 PPDPFQ9H3Y8 114 aa9.34□□□□□ -0.91
DNMT1-203ENST00000540357 PRRC2AP48634 2157 aaKnown RBP9.33□□□□□ -0.92
DNMT1-203ENST00000540357 A0A087WZ39 114 aa9.33□□□□□ -0.92
DNMT1-203ENST00000540357 ZNF575Q86XF7 245 aa9.33□□□□□ -0.92
DNMT1-203ENST00000540357 A0A087WVE0 104 aa9.33□□□□□ -0.92
DNMT1-203ENST00000540357 AVPP01185 164 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms