RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 CCL25O15444 150 aa9.69□□□□□ -0.86
UBE3B-211ENST00000539843 LRP1Q07954 4544 aaKnown RBP9.69□□□□□ -0.86
UBE3B-211ENST00000539843 FOXI1Q12951 378 aa9.69□□□□□ -0.86
UBE3B-211ENST00000539843 ISOC2Q96AB3 205 aa9.69□□□□□ -0.86
UBE3B-211ENST00000539843 LINC00959A0A1B0GUT2 108 aa9.68□□□□□ -0.86
UBE3B-211ENST00000539843 ZNF727A8MUV8 499 aa9.68□□□□□ -0.86
UBE3B-211ENST00000539843 MALP21145 153 aa9.68□□□□□ -0.86
UBE3B-211ENST00000539843 RIGQ13278 110 aa9.68□□□□□ -0.86
UBE3B-211ENST00000539843 PRSS3P2Q8NHM4 247 aa9.68□□□□□ -0.86
UBE3B-211ENST00000539843 CARD19Q96LW7 228 aa9.68□□□□□ -0.86
UBE3B-211ENST00000539843 TSHBP01222 138 aa9.67□□□□□ -0.86
UBE3B-211ENST00000539843 ESDP10768 282 aa9.67□□□□□ -0.86
UBE3B-211ENST00000539843 CD164L2Q6UWJ8 174 aa9.67□□□□□ -0.86
UBE3B-211ENST00000539843 LINC01551Q86U37 167 aa9.67□□□□□ -0.86
UBE3B-211ENST00000539843 LYPD6BQ8NI32 183 aa9.67□□□□□ -0.86
UBE3B-211ENST00000539843 KIR2DL4Q99706 377 aa9.67□□□□□ -0.86
UBE3B-211ENST00000539843 OSTCQ9NRP0 149 aa9.67□□□□□ -0.86
UBE3B-211ENST00000539843 FAT3Q8TDW7 4589 aa9.66□□□□□ -0.86
UBE3B-211ENST00000539843 TRBV27A0A0K0K1C4 114 aa9.66□□□□□ -0.86
UBE3B-211ENST00000539843 VCYO14598 125 aa9.66□□□□□ -0.86
UBE3B-211ENST00000539843 MRPL52Q86TS9 123 aaKnown RBP9.66□□□□□ -0.86
UBE3B-211ENST00000539843 ZNF664Q8N3J9 261 aa9.66□□□□□ -0.86
UBE3B-211ENST00000539843 TMEM18Q96B42 140 aa9.66□□□□□ -0.86
UBE3B-211ENST00000539843 PPP1R2P9O14990 202 aa9.65□□□□□ -0.86
UBE3B-211ENST00000539843 RAB4AP20338 218 aa9.65□□□□□ -0.86
UBE3B-211ENST00000539843 SYCNQ0VAF6 134 aa9.65□□□□□ -0.86
UBE3B-211ENST00000539843 CDC42SE2Q9NRR3 84 aa9.65□□□□□ -0.86
UBE3B-211ENST00000539843 A0A096LNI7 61 aa9.64□□□□□ -0.87
UBE3B-211ENST00000539843 C1orf196B1AJZ1 125 aa9.64□□□□□ -0.87
UBE3B-211ENST00000539843 POLR2KP53803 58 aaKnown RBP9.64□□□□□ -0.87
UBE3B-211ENST00000539843 PRR3P79522 188 aaKnown RBP9.64□□□□□ -0.87
UBE3B-211ENST00000539843 AMN1Q8IY45 258 aa9.64□□□□□ -0.87
UBE3B-211ENST00000539843 hCG_2014768A0A024R1R8 64 aa9.63□□□□□ -0.87
UBE3B-211ENST00000539843 CAMPP49913 170 aa9.63□□□□□ -0.87
UBE3B-211ENST00000539843 SUMO2P61956 95 aaKnown RBP9.63□□□□□ -0.87
UBE3B-211ENST00000539843 NAT8BQ9UHF3 227 aa9.63□□□□□ -0.87
UBE3B-211ENST00000539843 COX7A2LO14548 114 aa9.62□□□□□ -0.87
UBE3B-211ENST00000539843 TCAPO15273 167 aa9.62□□□□□ -0.87
UBE3B-211ENST00000539843 APOMO95445 188 aa9.62□□□□□ -0.87
UBE3B-211ENST00000539843 FAM74A3Q4VXF1 159 aa9.62□□□□□ -0.87
UBE3B-211ENST00000539843 REG3GQ6UW15 175 aa9.62□□□□□ -0.87
UBE3B-211ENST00000539843 PKHD1L1Q86WI1 4243 aa9.62□□□□□ -0.87
UBE3B-211ENST00000539843 LOC107984640A0A0U1RRK4 108 aa9.61□□□□□ -0.87
UBE3B-211ENST00000539843 GAS8-AS1O95177 125 aa9.61□□□□□ -0.87
UBE3B-211ENST00000539843 MT1HL1P0DM35 61 aa9.61□□□□□ -0.87
UBE3B-211ENST00000539843 TMEM241Q24JQ0 296 aa9.61□□□□□ -0.87
UBE3B-211ENST00000539843 CSDC2Q9Y534 153 aaKnown RBP9.61□□□□□ -0.87
UBE3B-211ENST00000539843 A0A1B0GW15 77 aa9.6□□□□□ -0.87
UBE3B-211ENST00000539843 SRP19P09132 144 aaKnown RBP9.6□□□□□ -0.87
UBE3B-211ENST00000539843 SPINK6Q6UWN8 80 aa9.6□□□□□ -0.87
UBE3B-211ENST00000539843 Q6ZRP5 223 aa9.6□□□□□ -0.87
UBE3B-211ENST00000539843 NUP35Q8NFH5 326 aa9.6□□□□□ -0.87
UBE3B-211ENST00000539843 LINC00526Q96FQ7 95 aa9.6□□□□□ -0.87
UBE3B-211ENST00000539843 CAMK2N2Q96S95 79 aa9.6□□□□□ -0.87
UBE3B-211ENST00000539843 V9GYV3 84 aa9.6□□□□□ -0.87
UBE3B-211ENST00000539843 HMCN2Q8NDA2 5059 aa9.6□□□□□ -0.87
UBE3B-211ENST00000539843 IGLV4-69A0A075B6H9 119 aa9.59□□□□□ -0.87
UBE3B-211ENST00000539843 TRAV13-1A0A0B4J241 112 aa9.59□□□□□ -0.87
UBE3B-211ENST00000539843 LINC00862A6NCI5 91 aa9.59□□□□□ -0.87
UBE3B-211ENST00000539843 SMKR1H3BMG3 65 aa9.59□□□□□ -0.87
UBE3B-211ENST00000539843 S100A8P05109 93 aa9.59□□□□□ -0.87
UBE3B-211ENST00000539843 GAGE2BQ13066 116 aa9.59□□□□□ -0.87
UBE3B-211ENST00000539843 ADIRFQ15847 76 aa9.59□□□□□ -0.87
UBE3B-211ENST00000539843 PTTG1IPP53801 180 aa9.58□□□□□ -0.88
UBE3B-211ENST00000539843 C20orf78Q9BR46 151 aa9.58□□□□□ -0.88
UBE3B-211ENST00000539843 UBE2D4Q9Y2X8 147 aa9.58□□□□□ -0.88
UBE3B-211ENST00000539843 CKS2P33552 79 aa9.57□□□□□ -0.88
UBE3B-211ENST00000539843 FAM104BQ5XKR9 115 aa9.57□□□□□ -0.88
UBE3B-211ENST00000539843 C2orf48Q96LS8 159 aa9.57□□□□□ -0.88
UBE3B-211ENST00000539843 LINC01600Q96MT4 127 aa9.57□□□□□ -0.88
UBE3B-211ENST00000539843 TIMM21Q9BVV7 248 aa9.57□□□□□ -0.88
UBE3B-211ENST00000539843 NAT8Q9UHE5 227 aa9.57□□□□□ -0.88
UBE3B-211ENST00000539843 F8W036 122 aa9.56□□□□□ -0.88
UBE3B-211ENST00000539843 NRACQ8N912 160 aa9.56□□□□□ -0.88
UBE3B-211ENST00000539843 RPL23P62829 140 aaKnown RBP9.55□□□□□ -0.88
UBE3B-211ENST00000539843 RPL18AQ02543 176 aaKnown RBP9.55□□□□□ -0.88
UBE3B-211ENST00000539843 SPAG11BQ08648 103 aa9.55□□□□□ -0.88
UBE3B-211ENST00000539843 PEA15Q15121 130 aa9.55□□□□□ -0.88
UBE3B-211ENST00000539843 MRPL51Q4U2R6 128 aaKnown RBP9.55□□□□□ -0.88
UBE3B-211ENST00000539843 RNASE13Q5GAN3 156 aaKnown RBP9.55□□□□□ -0.88
UBE3B-211ENST00000539843 RPL32P62910 135 aaKnown RBP9.54□□□□□ -0.88
UBE3B-211ENST00000539843 Q6ZUT4 128 aa9.54□□□□□ -0.88
UBE3B-211ENST00000539843 C5orf38Q86SI9 138 aa9.54□□□□□ -0.88
UBE3B-211ENST00000539843 OR10D4PQ8NGN7 298 aa9.54□□□□□ -0.88
UBE3B-211ENST00000539843 SPANXA1Q9NS26 97 aa9.54□□□□□ -0.88
UBE3B-211ENST00000539843 A0A0J9YXV3 536 aa9.53□□□□□ -0.88
UBE3B-211ENST00000539843 SMIM27A0A1W2PRY6 76 aa9.53□□□□□ -0.88
UBE3B-211ENST00000539843 F8WDY8 70 aa9.53□□□□□ -0.88
UBE3B-211ENST00000539843 SMDT1Q9H4I9 107 aa9.53□□□□□ -0.88
UBE3B-211ENST00000539843 TRBV24-1A0A075B6N3 115 aa9.52□□□□□ -0.89
UBE3B-211ENST00000539843 MT-ND6P03923 174 aa9.52□□□□□ -0.89
UBE3B-211ENST00000539843 HBBP68871 147 aa9.52□□□□□ -0.89
UBE3B-211ENST00000539843 IMMP2LQ96T52 175 aa9.52□□□□□ -0.89
UBE3B-211ENST00000539843 TNFRSF6BO95407 300 aa9.51□□□□□ -0.89
UBE3B-211ENST00000539843 PPBPP02775 128 aa9.51□□□□□ -0.89
UBE3B-211ENST00000539843 SMIM2Q9BVW6 85 aa9.51□□□□□ -0.89
UBE3B-211ENST00000539843 NDUFA1O15239 70 aa9.5□□□□□ -0.89
UBE3B-211ENST00000539843 RAB5AP20339 215 aa9.5□□□□□ -0.89
UBE3B-211ENST00000539843 RNF151Q2KHN1 245 aa9.5□□□□□ -0.89
UBE3B-211ENST00000539843 MRPL54Q6P161 138 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms