RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 EDN2P20800 178 aa7.45□□□□□ -1.22
COL4A6-208ENST00000538570 ODF3BA8MYP8 253 aa7.45□□□□□ -1.22
COL4A6-208ENST00000538570 WFDC10AQ9H1F0 79 aa7.45□□□□□ -1.22
COL4A6-208ENST00000538570 MED13Q9UHV7 2174 aa7.45□□□□□ -1.22
COL4A6-208ENST00000538570 FAM30AQ9NZY2 134 aa7.45□□□□□ -1.22
COL4A6-208ENST00000538570 PTPRQQ9UMZ3 2332 aa7.45□□□□□ -1.22
COL4A6-208ENST00000538570 NOTCH2Q04721 2471 aa7.44□□□□□ -1.22
COL4A6-208ENST00000538570 K7EQG2 157 aa7.44□□□□□ -1.22
COL4A6-208ENST00000538570 PYGO1Q9Y3Y4 419 aa7.44□□□□□ -1.22
COL4A6-208ENST00000538570 MSMPQ1L6U9 139 aa7.43□□□□□ -1.22
COL4A6-208ENST00000538570 FBXL19-AS1Q494R0 122 aa7.43□□□□□ -1.22
COL4A6-208ENST00000538570 CXCL6P80162 114 aa7.43□□□□□ -1.22
COL4A6-208ENST00000538570 LINC01548A6NM66 108 aa7.43□□□□□ -1.22
COL4A6-208ENST00000538570 CCKP06307 115 aa7.43□□□□□ -1.22
COL4A6-208ENST00000538570 MBD6Q96DN6 1003 aa7.43□□□□□ -1.22
COL4A6-208ENST00000538570 LINC00574Q9H8X3 128 aa7.42□□□□□ -1.22
COL4A6-208ENST00000538570 DEFB131BA0A096LNP1 70 aa7.42□□□□□ -1.22
COL4A6-208ENST00000538570 TRBV6-8A0A0A6YYG3 113 aa7.42□□□□□ -1.22
COL4A6-208ENST00000538570 IGF1P05019 195 aa7.42□□□□□ -1.22
COL4A6-208ENST00000538570 HILS1P60008 231 aa7.42□□□□□ -1.22
COL4A6-208ENST00000538570 DEFB114Q30KQ6 69 aa7.42□□□□□ -1.22
COL4A6-208ENST00000538570 TECTAO75443 2155 aa7.42□□□□□ -1.22
COL4A6-208ENST00000538570 PRYO14603 147 aa7.42□□□□□ -1.22
COL4A6-208ENST00000538570 C1orf158Q8N1D5 194 aa7.42□□□□□ -1.22
COL4A6-208ENST00000538570 DENND4CQ5VZ89 1909 aa7.42□□□□□ -1.22
COL4A6-208ENST00000538570 C6orf99Q4VX62 202 aa7.41□□□□□ -1.22
COL4A6-208ENST00000538570 M0QY20 66 aa7.41□□□□□ -1.22
COL4A6-208ENST00000538570 LST1O00453 97 aa7.41□□□□□ -1.22
COL4A6-208ENST00000538570 U3KQK5 164 aa7.41□□□□□ -1.22
COL4A6-208ENST00000538570 SPG11Q96JI7 2443 aa7.41□□□□□ -1.22
COL4A6-208ENST00000538570 Q6YL49 198 aa7.41□□□□□ -1.22
COL4A6-208ENST00000538570 XAGE1AQ9HD64 81 aa7.41□□□□□ -1.22
COL4A6-208ENST00000538570 CACNA1AO00555 2505 aa7.41□□□□□ -1.22
COL4A6-208ENST00000538570 CUL9Q8IWT3 2517 aa7.41□□□□□ -1.22
COL4A6-208ENST00000538570 C3orf84H3BNL1 204 aa7.4□□□□□ -1.22
COL4A6-208ENST00000538570 DCANP1Q8TF63 244 aa7.4□□□□□ -1.22
COL4A6-208ENST00000538570 LMO4P61968 165 aa7.4□□□□□ -1.22
COL4A6-208ENST00000538570 A0A087WVE0 104 aa7.4□□□□□ -1.23
COL4A6-208ENST00000538570 TRBV6-4A0A1B0GX49 114 aa7.4□□□□□ -1.23
COL4A6-208ENST00000538570 PLXNB3Q9ULL4 1909 aa7.4□□□□□ -1.23
COL4A6-208ENST00000538570 RNF185Q96GF1 192 aa7.4□□□□□ -1.23
COL4A6-208ENST00000538570 SYCNQ0VAF6 134 aa7.39□□□□□ -1.23
COL4A6-208ENST00000538570 A0A1W2PNU3 283 aaPredicted RBP7.39□□□□□ -1.23
COL4A6-208ENST00000538570 BRWD1-AS2P59051 145 aa7.39□□□□□ -1.23
COL4A6-208ENST00000538570 RPS28P62857 69 aaKnown RBP7.39□□□□□ -1.23
COL4A6-208ENST00000538570 DSCAML1Q8TD84 2053 aa7.39□□□□□ -1.23
COL4A6-208ENST00000538570 C9orf85Q96MD7 179 aa7.39□□□□□ -1.23
COL4A6-208ENST00000538570 MDFIQ99750 246 aa7.39□□□□□ -1.23
COL4A6-208ENST00000538570 PLAC8L1A1L4L8 177 aa7.38□□□□□ -1.23
COL4A6-208ENST00000538570 PLA2G2AP14555 144 aa7.38□□□□□ -1.23
COL4A6-208ENST00000538570 CRIP1P50238 77 aa7.38□□□□□ -1.23
COL4A6-208ENST00000538570 BEAN1Q3B7T3 259 aa7.38□□□□□ -1.23
COL4A6-208ENST00000538570 DHRS4-AS1Q9P1J3 65 aa7.38□□□□□ -1.23
COL4A6-208ENST00000538570 C22orf34Q6ZV56 151 aa7.38□□□□□ -1.23
COL4A6-208ENST00000538570 TRBV6-5A0A0K0K1A5 114 aa7.38□□□□□ -1.23
COL4A6-208ENST00000538570 Q8N9L7 120 aa7.38□□□□□ -1.23
COL4A6-208ENST00000538570 C7orf33Q8WU49 177 aa7.38□□□□□ -1.23
COL4A6-208ENST00000538570 ANKHD1Q8IWZ3 2542 aaKnown RBP7.38□□□□□ -1.23
COL4A6-208ENST00000538570 IGHV4-31P0DP07 118 aa7.37□□□□□ -1.23
COL4A6-208ENST00000538570 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.37□□□□□ -1.23
COL4A6-208ENST00000538570 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.37□□□□□ -1.23
COL4A6-208ENST00000538570 ZNF295-AS1Q8N0V1 137 aa7.37□□□□□ -1.23
COL4A6-208ENST00000538570 ZNF706Q9Y5V0 76 aaPredicted RBP7.37□□□□□ -1.23
COL4A6-208ENST00000538570 PROK1P58294 105 aa7.37□□□□□ -1.23
COL4A6-208ENST00000538570 M0R378 163 aa7.37□□□□□ -1.23
COL4A6-208ENST00000538570 EIF4EBP1Q13541 118 aaPredicted RBP7.36□□□□□ -1.23
COL4A6-208ENST00000538570 WFDC13Q8IUB5 93 aa7.36□□□□□ -1.23
COL4A6-208ENST00000538570 IGKV2-28A0A075B6P5 120 aa7.36□□□□□ -1.23
COL4A6-208ENST00000538570 IGKV2D-28P01615 120 aa7.36□□□□□ -1.23
COL4A6-208ENST00000538570 CD164Q04900 197 aa7.36□□□□□ -1.23
COL4A6-208ENST00000538570 C1orf229Q6ZS94 237 aaPredicted RBP7.36□□□□□ -1.23
COL4A6-208ENST00000538570 POM121L12Q8N7R1 296 aa7.36□□□□□ -1.23
COL4A6-208ENST00000538570 Q8NA96 180 aa7.36□□□□□ -1.23
COL4A6-208ENST00000538570 Q6ZQY7 126 aa7.36□□□□□ -1.23
COL4A6-208ENST00000538570 ESRGQ1W209 222 aa7.35□□□□□ -1.23
COL4A6-208ENST00000538570 CD164L2Q6UWJ8 174 aa7.35□□□□□ -1.23
COL4A6-208ENST00000538570 LY6LH3BQJ8 138 aa7.35□□□□□ -1.23
COL4A6-208ENST00000538570 TSHBP01222 138 aa7.35□□□□□ -1.23
COL4A6-208ENST00000538570 WISP2O76076 250 aa7.35□□□□□ -1.23
COL4A6-208ENST00000538570 SPINK6Q6UWN8 80 aa7.35□□□□□ -1.23
COL4A6-208ENST00000538570 Q6ZPA2 131 aa7.35□□□□□ -1.23
COL4A6-208ENST00000538570 Q6ZS46 218 aa7.35□□□□□ -1.23
COL4A6-208ENST00000538570 KIF26AQ9ULI4 1882 aaPredicted RBP7.35□□□□□ -1.23
COL4A6-208ENST00000538570 FSTL3O95633 263 aa7.35□□□□□ -1.23
COL4A6-208ENST00000538570 BBC3Q96PG8 261 aaPredicted RBP7.34□□□□□ -1.23
COL4A6-208ENST00000538570 PLCE1Q9P212 2302 aa7.34□□□□□ -1.23
COL4A6-208ENST00000538570 TRBV7-7A0A0K0K1E9 115 aa7.34□□□□□ -1.23
COL4A6-208ENST00000538570 UBE2D1P51668 147 aa7.34□□□□□ -1.23
COL4A6-208ENST00000538570 SMIM11BQ8TCY0 68 aa7.34□□□□□ -1.23
COL4A6-208ENST00000538570 CDIP1Q9H305 208 aa7.34□□□□□ -1.23
COL4A6-208ENST00000538570 LINC00482Q8N8I6 264 aa7.34□□□□□ -1.23
COL4A6-208ENST00000538570 IGLV4-69A0A075B6H9 119 aa7.33□□□□□ -1.24
COL4A6-208ENST00000538570 Q8N6K4 173 aa7.33□□□□□ -1.24
COL4A6-208ENST00000538570 NRACQ8N912 160 aa7.33□□□□□ -1.24
COL4A6-208ENST00000538570 TMEM131Q92545 1883 aa7.33□□□□□ -1.24
COL4A6-208ENST00000538570 TRAV10A0A0B4J240 114 aa7.33□□□□□ -1.24
COL4A6-208ENST00000538570 CELA1Q9UNI1 258 aa7.33□□□□□ -1.24
COL4A6-208ENST00000538570 UBE2D4Q9Y2X8 147 aa7.33□□□□□ -1.24
COL4A6-208ENST00000538570 COX17Q14061 63 aa7.32□□□□□ -1.24
COL4A6-208ENST00000538570 SPAG11AQ6PDA7 123 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms