RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 MAJINQ3KP22 176 aa12.42□□□□□ -0.42
TNFRSF1B-204ENST00000536782 PRSS3P2Q8NHM4 247 aa12.42□□□□□ -0.42
TNFRSF1B-204ENST00000536782 GVQW2A0A096LPI5 108 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF1B-204ENST00000536782 IGKV2-24A0A0C4DH68 120 aa12.41□□□□□ -0.42
TNFRSF1B-204ENST00000536782 ZNF25P17030 456 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF1B-204ENST00000536782 I3L3M4 83 aa12.4□□□□□ -0.42
TNFRSF1B-204ENST00000536782 PMCHP20382 165 aa12.4□□□□□ -0.42
TNFRSF1B-204ENST00000536782 BTF3L4Q96K17 158 aa12.4□□□□□ -0.42
TNFRSF1B-204ENST00000536782 FOXI1Q12951 378 aa12.39□□□□□ -0.43
TNFRSF1B-204ENST00000536782 NUP35Q8NFH5 326 aa12.39□□□□□ -0.43
TNFRSF1B-204ENST00000536782 OR5A1Q8NGJ0 315 aa12.39□□□□□ -0.43
TNFRSF1B-204ENST00000536782 TMEM101Q96IK0 257 aa12.39□□□□□ -0.43
TNFRSF1B-204ENST00000536782 TMEM191AQ9H0A3 160 aa12.39□□□□□ -0.43
TNFRSF1B-204ENST00000536782 NAT8BQ9UHF3 227 aa12.39□□□□□ -0.43
TNFRSF1B-204ENST00000536782 LRP2P98164 4655 aa12.39□□□□□ -0.43
TNFRSF1B-204ENST00000536782 TRBV6-5A0A0K0K1A5 114 aa12.38□□□□□ -0.43
TNFRSF1B-204ENST00000536782 RIGQ13278 110 aa12.38□□□□□ -0.43
TNFRSF1B-204ENST00000536782 STPG4Q8N801 248 aa12.38□□□□□ -0.43
TNFRSF1B-204ENST00000536782 XCL1P47992 114 aa12.37□□□□□ -0.43
TNFRSF1B-204ENST00000536782 SMIM27A0A1W2PRY6 76 aa12.36□□□□□ -0.43
TNFRSF1B-204ENST00000536782 CLLU1Q5K131 121 aa12.36□□□□□ -0.43
TNFRSF1B-204ENST00000536782 ST20Q9HBF5 79 aa12.36□□□□□ -0.43
TNFRSF1B-204ENST00000536782 A0A096LNI7 61 aa12.35□□□□□ -0.43
TNFRSF1B-204ENST00000536782 LINC00959A0A1B0GUT2 108 aa12.35□□□□□ -0.43
TNFRSF1B-204ENST00000536782 CCL25O15444 150 aa12.35□□□□□ -0.43
TNFRSF1B-204ENST00000536782 PRR3P79522 188 aaKnown RBP12.35□□□□□ -0.43
TNFRSF1B-204ENST00000536782 LINC00474Q9P2X8 69 aa12.35□□□□□ -0.43
TNFRSF1B-204ENST00000536782 PKIGQ9Y2B9 76 aa12.35□□□□□ -0.43
TNFRSF1B-204ENST00000536782 IGHV1-58A0A0C4DH39 117 aa12.34□□□□□ -0.43
TNFRSF1B-204ENST00000536782 TSHBP01222 138 aa12.34□□□□□ -0.43
TNFRSF1B-204ENST00000536782 ESDP10768 282 aa12.34□□□□□ -0.43
TNFRSF1B-204ENST00000536782 MRAP2Q96G30 205 aa12.34□□□□□ -0.43
TNFRSF1B-204ENST00000536782 TMEM242Q9NWH2 141 aa12.34□□□□□ -0.43
TNFRSF1B-204ENST00000536782 A0A1B0GW15 77 aa12.33□□□□□ -0.44
TNFRSF1B-204ENST00000536782 GAS8-AS1O95177 125 aa12.33□□□□□ -0.44
TNFRSF1B-204ENST00000536782 RAB4AP20338 218 aa12.33□□□□□ -0.44
TNFRSF1B-204ENST00000536782 PNRC1Q12796 327 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF1B-204ENST00000536782 SS18Q15532 418 aa12.32□□□□□ -0.44
TNFRSF1B-204ENST00000536782 AMN1Q8IY45 258 aa12.32□□□□□ -0.44
TNFRSF1B-204ENST00000536782 LINC00526Q96FQ7 95 aa12.32□□□□□ -0.44
TNFRSF1B-204ENST00000536782 CARD19Q96LW7 228 aa12.32□□□□□ -0.44
TNFRSF1B-204ENST00000536782 RNF213Q63HN8 5207 aa12.32□□□□□ -0.44
TNFRSF1B-204ENST00000536782 MRPL52Q86TS9 123 aaKnown RBP12.31□□□□□ -0.44
TNFRSF1B-204ENST00000536782 LINC01600Q96MT4 127 aa12.31□□□□□ -0.44
TNFRSF1B-204ENST00000536782 CDC42SE2Q9NRR3 84 aa12.31□□□□□ -0.44
TNFRSF1B-204ENST00000536782 ZNF561-AS1K7EIQ3 104 aa12.3□□□□□ -0.44
TNFRSF1B-204ENST00000536782 PPP1R2P9O14990 202 aa12.3□□□□□ -0.44
TNFRSF1B-204ENST00000536782 PPP1R17O96001 155 aa12.3□□□□□ -0.44
TNFRSF1B-204ENST00000536782 POLR2KP53803 58 aaKnown RBP12.3□□□□□ -0.44
TNFRSF1B-204ENST00000536782 CD164L2Q6UWJ8 174 aa12.3□□□□□ -0.44
TNFRSF1B-204ENST00000536782 ZNF664Q8N3J9 261 aa12.3□□□□□ -0.44
TNFRSF1B-204ENST00000536782 TRBV27A0A0K0K1C4 114 aa12.29□□□□□ -0.44
TNFRSF1B-204ENST00000536782 C7orf77A4D0Y5 90 aa12.29□□□□□ -0.44
TNFRSF1B-204ENST00000536782 IFITM2Q01629 132 aa12.29□□□□□ -0.44
TNFRSF1B-204ENST00000536782 S100A8P05109 93 aa12.28□□□□□ -0.44
TNFRSF1B-204ENST00000536782 SYCNQ0VAF6 134 aa12.28□□□□□ -0.44
TNFRSF1B-204ENST00000536782 FAM104BQ5XKR9 115 aa12.28□□□□□ -0.44
TNFRSF1B-204ENST00000536782 SPINK6Q6UWN8 80 aa12.27□□□□□ -0.45
TNFRSF1B-204ENST00000536782 CAMPP49913 170 aa12.26□□□□□ -0.45
TNFRSF1B-204ENST00000536782 HBBP68871 147 aa12.26□□□□□ -0.45
TNFRSF1B-204ENST00000536782 UQCC3Q6UW78 93 aa12.26□□□□□ -0.45
TNFRSF1B-204ENST00000536782 ANAPC16Q96DE5 110 aa12.26□□□□□ -0.45
TNFRSF1B-204ENST00000536782 A0A1B0GXF2 115 aa12.25□□□□□ -0.45
TNFRSF1B-204ENST00000536782 LINC00862A6NCI5 91 aa12.25□□□□□ -0.45
TNFRSF1B-204ENST00000536782 VCYO14598 125 aa12.25□□□□□ -0.45
TNFRSF1B-204ENST00000536782 FCER1GP30273 86 aa12.25□□□□□ -0.45
TNFRSF1B-204ENST00000536782 ATP5L2Q7Z4Y8 100 aa12.25□□□□□ -0.45
TNFRSF1B-204ENST00000536782 NRACQ8N912 160 aa12.25□□□□□ -0.45
TNFRSF1B-204ENST00000536782 C1orf196B1AJZ1 125 aa12.24□□□□□ -0.45
TNFRSF1B-204ENST00000536782 F8W036 122 aa12.24□□□□□ -0.45
TNFRSF1B-204ENST00000536782 MT-ND4LP03901 98 aa12.24□□□□□ -0.45
TNFRSF1B-204ENST00000536782 MALP21145 153 aa12.24□□□□□ -0.45
TNFRSF1B-204ENST00000536782 MRPL51Q4U2R6 128 aaKnown RBP12.24□□□□□ -0.45
TNFRSF1B-204ENST00000536782 MRPL54Q6P161 138 aaKnown RBP12.24□□□□□ -0.45
TNFRSF1B-204ENST00000536782 REG3GQ6UW15 175 aa12.24□□□□□ -0.45
TNFRSF1B-204ENST00000536782 Q6ZRP5 223 aa12.24□□□□□ -0.45
TNFRSF1B-204ENST00000536782 A0A0J9YXV3 536 aa12.23□□□□□ -0.45
TNFRSF1B-204ENST00000536782 SMKR1H3BMG3 65 aa12.23□□□□□ -0.45
TNFRSF1B-204ENST00000536782 PTTG1IPP53801 180 aa12.23□□□□□ -0.45
TNFRSF1B-204ENST00000536782 SUMO2P61956 95 aaKnown RBP12.23□□□□□ -0.45
TNFRSF1B-204ENST00000536782 SMAGPQ0VAQ4 97 aa12.23□□□□□ -0.45
TNFRSF1B-204ENST00000536782 CSDC2Q9Y534 153 aaKnown RBP12.23□□□□□ -0.45
TNFRSF1B-204ENST00000536782 IGLV4-69A0A075B6H9 119 aa12.22□□□□□ -0.45
TNFRSF1B-204ENST00000536782 LOC107984640A0A0U1RRK4 108 aa12.22□□□□□ -0.45
TNFRSF1B-204ENST00000536782 COX7A2LO14548 114 aa12.22□□□□□ -0.45
TNFRSF1B-204ENST00000536782 TRBV24-1A0A075B6N3 115 aa12.21□□□□□ -0.45
TNFRSF1B-204ENST00000536782 GAGE2BQ13066 116 aa12.21□□□□□ -0.45
TNFRSF1B-204ENST00000536782 ODF1Q14990 250 aa12.21□□□□□ -0.45
TNFRSF1B-204ENST00000536782 KIR2DL4Q99706 377 aa12.21□□□□□ -0.45
TNFRSF1B-204ENST00000536782 C20orf78Q9BR46 151 aa12.21□□□□□ -0.45
TNFRSF1B-204ENST00000536782 UBE2D4Q9Y2X8 147 aa12.21□□□□□ -0.45
TNFRSF1B-204ENST00000536782 CKS2P33552 79 aa12.2□□□□□ -0.46
TNFRSF1B-204ENST00000536782 RPL32P62910 135 aaKnown RBP12.2□□□□□ -0.46
TNFRSF1B-204ENST00000536782 SRSF9Q13242 221 aaKnown RBP eCLIP12.2□□□□□ -0.46
TNFRSF1B-204ENST00000536782 TMEM218A2RU14 115 aa12.19□□□□□ -0.46
TNFRSF1B-204ENST00000536782 PPBPP02775 128 aa12.19□□□□□ -0.46
TNFRSF1B-204ENST00000536782 KRTAP10-8P60410 259 aa12.19□□□□□ -0.46
TNFRSF1B-204ENST00000536782 RNASE13Q5GAN3 156 aaKnown RBP12.19□□□□□ -0.46
TNFRSF1B-204ENST00000536782 CAMK2N2Q96S95 79 aa12.19□□□□□ -0.46
TNFRSF1B-204ENST00000536782 TRAV13-1A0A0B4J241 112 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms