RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 FAM104AQ969W3 186 aa11.76□□□□□ -0.53
DDX55-204ENST00000536079 GNB1LQ9BYB4 327 aa11.76□□□□□ -0.53
DDX55-204ENST00000536079 UBE2D4Q9Y2X8 147 aa11.76□□□□□ -0.53
DDX55-204ENST00000536079 HLA-DQA1P01909 254 aa11.75□□□□□ -0.53
DDX55-204ENST00000536079 ZNF25P17030 456 aaPredicted RBP11.75□□□□□ -0.53
DDX55-204ENST00000536079 YPEL4Q96NS1 127 aa11.75□□□□□ -0.53
DDX55-204ENST00000536079 PGPEP1Q9NXJ5 209 aa11.75□□□□□ -0.53
DDX55-204ENST00000536079 CDC42SE2Q9NRR3 84 aa11.74□□□□□ -0.53
DDX55-204ENST00000536079 LAMTOR2Q9Y2Q5 125 aa11.74□□□□□ -0.53
DDX55-204ENST00000536079 KRTAP10-1P60331 282 aa11.73□□□□□ -0.53
DDX55-204ENST00000536079 RNASE13Q5GAN3 156 aaKnown RBP11.73□□□□□ -0.53
DDX55-204ENST00000536079 OR5A1Q8NGJ0 315 aa11.73□□□□□ -0.53
DDX55-204ENST00000536079 MAP1LC3AQ9H492 121 aa11.73□□□□□ -0.53
DDX55-204ENST00000536079 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.72□□□□□ -0.53
DDX55-204ENST00000536079 TRAV8-4A0A0B4J246 113 aa11.72□□□□□ -0.53
DDX55-204ENST00000536079 ZNF664Q8N3J9 261 aa11.72□□□□□ -0.53
DDX55-204ENST00000536079 Q8N8P6 123 aa11.72□□□□□ -0.53
DDX55-204ENST00000536079 TMEM101Q96IK0 257 aa11.72□□□□□ -0.53
DDX55-204ENST00000536079 OPRPNQ99935 248 aaPredicted RBP11.72□□□□□ -0.53
DDX55-204ENST00000536079 MRPL18Q9H0U6 180 aaKnown RBP11.72□□□□□ -0.53
DDX55-204ENST00000536079 GAGE12HA6NDE8 117 aa11.71□□□□□ -0.53
DDX55-204ENST00000536079 USP17L23D6RBM5 183 aa11.71□□□□□ -0.53
DDX55-204ENST00000536079 IFI27P40305 119 aaPredicted RBP11.71□□□□□ -0.53
DDX55-204ENST00000536079 Q6ZUT4 128 aa11.71□□□□□ -0.53
DDX55-204ENST00000536079 NTN5Q8WTR8 489 aaPredicted RBP11.71□□□□□ -0.53
DDX55-204ENST00000536079 ALKBH7Q9BT30 221 aaPredicted RBP11.71□□□□□ -0.53
DDX55-204ENST00000536079 HSPG2P98160 4391 aa11.71□□□□□ -0.54
DDX55-204ENST00000536079 IGLV5-52A0A0A0MRZ9 124 aa11.7□□□□□ -0.54
DDX55-204ENST00000536079 LINC00959A0A1B0GUT2 108 aa11.7□□□□□ -0.54
DDX55-204ENST00000536079 CDPF1Q6NVV7 123 aa11.7□□□□□ -0.54
DDX55-204ENST00000536079 CBLN2Q8IUK8 224 aa11.7□□□□□ -0.54
DDX55-204ENST00000536079 CHCHD10Q8WYQ3 142 aaPredicted RBP11.7□□□□□ -0.54
DDX55-204ENST00000536079 CSDC2Q9Y534 153 aaKnown RBP11.7□□□□□ -0.54
DDX55-204ENST00000536079 RAB5AP20339 215 aa11.69□□□□□ -0.54
DDX55-204ENST00000536079 FABP9Q0Z7S8 132 aa11.69□□□□□ -0.54
DDX55-204ENST00000536079 TIMM21Q9BVV7 248 aa11.69□□□□□ -0.54
DDX55-204ENST00000536079 KRTAP17-1Q9BYP8 105 aa11.69□□□□□ -0.54
DDX55-204ENST00000536079 DNAH8Q96JB1 4490 aa11.69□□□□□ -0.54
DDX55-204ENST00000536079 PRSS1P07477 247 aa11.68□□□□□ -0.54
DDX55-204ENST00000536079 COX19Q49B96 90 aa11.68□□□□□ -0.54
DDX55-204ENST00000536079 LINC01620Q4KN68 170 aa11.68□□□□□ -0.54
DDX55-204ENST00000536079 DGAT2L7PQ6IED9 249 aa11.68□□□□□ -0.54
DDX55-204ENST00000536079 GCSHP23434 173 aa11.67□□□□□ -0.54
DDX55-204ENST00000536079 FOXI1Q12951 378 aa11.67□□□□□ -0.54
DDX55-204ENST00000536079 CCL25O15444 150 aa11.66□□□□□ -0.54
DDX55-204ENST00000536079 MT-ND6P03923 174 aa11.66□□□□□ -0.54
DDX55-204ENST00000536079 XCL1P47992 114 aa11.66□□□□□ -0.54
DDX55-204ENST00000536079 TMEM18Q96B42 140 aa11.66□□□□□ -0.54
DDX55-204ENST00000536079 TRAPPC1Q9Y5R8 145 aa11.66□□□□□ -0.54
DDX55-204ENST00000536079 NXT2Q9NPJ8 142 aaKnown RBP11.65□□□□□ -0.54
DDX55-204ENST00000536079 C15orf56Q8N910 161 aa11.64□□□□□ -0.55
DDX55-204ENST00000536079 SPANXA1Q9NS26 97 aa11.64□□□□□ -0.55
DDX55-204ENST00000536079 IGLV4-3A0A075B6K6 122 aa11.63□□□□□ -0.55
DDX55-204ENST00000536079 TRAV13-1A0A0B4J241 112 aa11.63□□□□□ -0.55
DDX55-204ENST00000536079 SLPIP03973 132 aa11.63□□□□□ -0.55
DDX55-204ENST00000536079 MRPS36P82909 103 aaKnown RBP11.63□□□□□ -0.55
DDX55-204ENST00000536079 ZC2HC1BQ5TFG8 222 aa11.63□□□□□ -0.55
DDX55-204ENST00000536079 C2orf66Q6UXQ4 117 aa11.63□□□□□ -0.55
DDX55-204ENST00000536079 SMCO4Q9NRQ5 59 aa11.63□□□□□ -0.55
DDX55-204ENST00000536079 FAM30AQ9NZY2 134 aa11.63□□□□□ -0.55
DDX55-204ENST00000536079 SMAGPQ0VAQ4 97 aa11.62□□□□□ -0.55
DDX55-204ENST00000536079 SS18Q15532 418 aa11.62□□□□□ -0.55
DDX55-204ENST00000536079 PRSS3P2Q8NHM4 247 aa11.62□□□□□ -0.55
DDX55-204ENST00000536079 PYGO1Q9Y3Y4 419 aa11.62□□□□□ -0.55
DDX55-204ENST00000536079 LINC01546A6NGU7 62 aa11.61□□□□□ -0.55
DDX55-204ENST00000536079 CDK2AP2O75956 126 aa11.61□□□□□ -0.55
DDX55-204ENST00000536079 XGP55808 180 aa11.61□□□□□ -0.55
DDX55-204ENST00000536079 HAMPP81172 84 aa11.61□□□□□ -0.55
DDX55-204ENST00000536079 C14orf177Q52M58 125 aa11.61□□□□□ -0.55
DDX55-204ENST00000536079 ORMDL2Q53FV1 153 aa11.61□□□□□ -0.55
DDX55-204ENST00000536079 URB1-AS1Q96HZ7 61 aa11.61□□□□□ -0.55
DDX55-204ENST00000536079 IGIPA6NJ69 53 aa11.6□□□□□ -0.55
DDX55-204ENST00000536079 HIGD2BQ4VC39 106 aa11.6□□□□□ -0.55
DDX55-204ENST00000536079 CD164L2Q6UWJ8 174 aa11.6□□□□□ -0.55
DDX55-204ENST00000536079 CYSLTR1Q9Y271 337 aa11.6□□□□□ -0.55
DDX55-204ENST00000536079 hDV102S1A0JD36 115 aa11.59□□□□□ -0.55
DDX55-204ENST00000536079 K7EMI3 77 aa11.59□□□□□ -0.55
DDX55-204ENST00000536079 C18orf32Q8TCD1 76 aa11.59□□□□□ -0.55
DDX55-204ENST00000536079 C1orf196B1AJZ1 125 aa11.58□□□□□ -0.56
DDX55-204ENST00000536079 LINC00173Q6ZV60 143 aa11.58□□□□□ -0.56
DDX55-204ENST00000536079 TOMM6Q96B49 74 aa11.58□□□□□ -0.56
DDX55-204ENST00000536079 IFITM10A6NMD0 228 aa11.57□□□□□ -0.56
DDX55-204ENST00000536079 SCO1O75880 301 aa11.57□□□□□ -0.56
DDX55-204ENST00000536079 LINC00526Q96FQ7 95 aa11.57□□□□□ -0.56
DDX55-204ENST00000536079 C5orf38Q86SI9 138 aa11.56□□□□□ -0.56
DDX55-204ENST00000536079 TMEM141Q96I45 108 aa11.56□□□□□ -0.56
DDX55-204ENST00000536079 COLCA2A8K830 154 aa11.55□□□□□ -0.56
DDX55-204ENST00000536079 COX6A2Q02221 97 aa11.55□□□□□ -0.56
DDX55-204ENST00000536079 FA2HQ7L5A8 372 aa11.55□□□□□ -0.56
DDX55-204ENST00000536079 AMELXQ99217 191 aa11.55□□□□□ -0.56
DDX55-204ENST00000536079 A0A096LNJ9 63 aa11.54□□□□□ -0.56
DDX55-204ENST00000536079 GVQW2A0A096LPI5 108 aaPredicted RBP11.54□□□□□ -0.56
DDX55-204ENST00000536079 CNBPP62633 177 aaKnown RBP11.54□□□□□ -0.56
DDX55-204ENST00000536079 CFAP161Q6P656 301 aa11.54□□□□□ -0.56
DDX55-204ENST00000536079 Q6ZSA8 131 aa11.54□□□□□ -0.56
DDX55-204ENST00000536079 KRTAP4-5Q9BYR2 181 aa11.54□□□□□ -0.56
DDX55-204ENST00000536079 UBE2D1P51668 147 aa11.53□□□□□ -0.56
DDX55-204ENST00000536079 LINC00242Q5T6M2 205 aa11.53□□□□□ -0.56
DDX55-204ENST00000536079 C9orf163Q8N9P6 203 aa11.53□□□□□ -0.56
DDX55-204ENST00000536079 IGHV3OR16-9A0A0B4J2B5 98 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms