RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 PSME4Q14997 1843 aa0.82□□□□□ -2.28
VBP1-203ENST00000535916 PLEKHH2Q8IVE3 1493 aa0.82□□□□□ -2.28
VBP1-203ENST00000535916 MLH3Q9UHC1 1453 aa0.82□□□□□ -2.28
VBP1-203ENST00000535916 KIAA1551Q9HCM1 1747 aa0.82□□□□□ -2.28
VBP1-203ENST00000535916 LOC285095A0A1B0GVY8 99 aa0.82□□□□□ -2.28
VBP1-203ENST00000535916 F2Z2F3 143 aa0.82□□□□□ -2.28
VBP1-203ENST00000535916 G3V318 75 aa0.82□□□□□ -2.28
VBP1-203ENST00000535916 FXYD6P3P58550 94 aa0.82□□□□□ -2.28
VBP1-203ENST00000535916 VAMP8Q9BV40 100 aa0.82□□□□□ -2.28
VBP1-203ENST00000535916 MANBALQ9NQG1 85 aa0.82□□□□□ -2.28
VBP1-203ENST00000535916 MED12Q93074 2177 aa0.81□□□□□ -2.28
VBP1-203ENST00000535916 MON2Q7Z3U7 1717 aa0.81□□□□□ -2.28
VBP1-203ENST00000535916 IGLC7A0M8Q6 106 aa0.81□□□□□ -2.28
VBP1-203ENST00000535916 F8VRH5 84 aa0.81□□□□□ -2.28
VBP1-203ENST00000535916 COX6CP09669 75 aa0.81□□□□□ -2.28
VBP1-203ENST00000535916 Q6ZRX8 168 aa0.81□□□□□ -2.28
VBP1-203ENST00000535916 LINC01558Q9Y6Z2 57 aa0.81□□□□□ -2.28
VBP1-203ENST00000535916 ESPL1Q14674 2120 aa0.8□□□□□ -2.28
VBP1-203ENST00000535916 ABCC3O15438 1527 aa0.8□□□□□ -2.28
VBP1-203ENST00000535916 A0A0D9SG42 100 aa0.8□□□□□ -2.28
VBP1-203ENST00000535916 TRBV7-7A0A0K0K1E9 115 aa0.8□□□□□ -2.28
VBP1-203ENST00000535916 C10orf142B7Z368 130 aa0.8□□□□□ -2.28
VBP1-203ENST00000535916 H7BZZ5 65 aa0.8□□□□□ -2.28
VBP1-203ENST00000535916 ATOX1O00244 68 aa0.8□□□□□ -2.28
VBP1-203ENST00000535916 UQCR11O14957 56 aa0.8□□□□□ -2.28
VBP1-203ENST00000535916 SFT2D2O95562 160 aa0.8□□□□□ -2.28
VBP1-203ENST00000535916 IGLC1P0CG04 106 aa0.8□□□□□ -2.28
VBP1-203ENST00000535916 SPINK9Q5DT21 86 aa0.8□□□□□ -2.28
VBP1-203ENST00000535916 CFAP126Q5VTH2 177 aa0.8□□□□□ -2.28
VBP1-203ENST00000535916 LINC00472Q9H8W2 130 aa0.8□□□□□ -2.28
VBP1-203ENST00000535916 LRRC37A2A6NM11 1700 aa0.8□□□□□ -2.28
VBP1-203ENST00000535916 ZNF236Q9UL36 1845 aa0.8□□□□□ -2.28
VBP1-203ENST00000535916 CEP162Q5TB80 1403 aa0.8□□□□□ -2.28
VBP1-203ENST00000535916 FANCAO15360 1455 aa0.8□□□□□ -2.28
VBP1-203ENST00000535916 MED14O60244 1454 aa0.8□□□□□ -2.28
VBP1-203ENST00000535916 NCOA6Q14686 2063 aaPredicted RBP0.79□□□□□ -2.28
VBP1-203ENST00000535916 CTXND1A0A1B0GTU2 59 aa0.79□□□□□ -2.28
VBP1-203ENST00000535916 NDUFC1O43677 76 aa0.79□□□□□ -2.28
VBP1-203ENST00000535916 BAGE2Q86Y30 109 aa0.79□□□□□ -2.28
VBP1-203ENST00000535916 FAM223AQ8IWN6 122 aa0.79□□□□□ -2.28
VBP1-203ENST00000535916 C9orf62Q8N4C0 152 aa0.79□□□□□ -2.28
VBP1-203ENST00000535916 SERP2Q8N6R1 65 aa0.79□□□□□ -2.28
VBP1-203ENST00000535916 FAIMQ9NVQ4 179 aa0.79□□□□□ -2.28
VBP1-203ENST00000535916 V9GYS6 101 aa0.79□□□□□ -2.28
VBP1-203ENST00000535916 EPRSP07814 1512 aaKnown RBP0.79□□□□□ -2.28
VBP1-203ENST00000535916 RAPGEF6Q8TEU7 1601 aa0.78□□□□□ -2.28
VBP1-203ENST00000535916 ASIPP42127 132 aa0.78□□□□□ -2.28
VBP1-203ENST00000535916 COX17Q14061 63 aa0.78□□□□□ -2.28
VBP1-203ENST00000535916 TMEM170BQ5T4T1 132 aa0.78□□□□□ -2.28
VBP1-203ENST00000535916 TRGV9Q99603 122 aa0.78□□□□□ -2.28
VBP1-203ENST00000535916 PRR15LQ9BU68 103 aa0.78□□□□□ -2.28
VBP1-203ENST00000535916 NXT2Q9NPJ8 142 aaKnown RBP0.78□□□□□ -2.28
VBP1-203ENST00000535916 CACFD1Q9UGQ2 172 aa0.78□□□□□ -2.28
VBP1-203ENST00000535916 ABCA4P78363 2273 aa0.78□□□□□ -2.28
VBP1-203ENST00000535916 NRXN1Q9ULB1 1477 aa0.78□□□□□ -2.28
VBP1-203ENST00000535916 UNC13BO14795 1591 aa0.78□□□□□ -2.29
VBP1-203ENST00000535916 SNRNP200O75643 2136 aaKnown RBP0.77□□□□□ -2.29
VBP1-203ENST00000535916 ROS1P08922 2347 aa0.77□□□□□ -2.29
VBP1-203ENST00000535916 SYS1-DBNDD2H3BUS1 97 aa0.77□□□□□ -2.29
VBP1-203ENST00000535916 APOC3P02656 99 aa0.77□□□□□ -2.29
VBP1-203ENST00000535916 GCHFRP30047 84 aa0.77□□□□□ -2.29
VBP1-203ENST00000535916 SFTA2Q6UW10 78 aa0.77□□□□□ -2.29
VBP1-203ENST00000535916 SMIM4Q8WVI0 70 aa0.77□□□□□ -2.29
VBP1-203ENST00000535916 SPRR4Q96PI1 79 aa0.77□□□□□ -2.29
VBP1-203ENST00000535916 C10orf95Q9H7T3 257 aa0.77□□□□□ -2.29
VBP1-203ENST00000535916 PROK2Q9HC23 129 aa0.77□□□□□ -2.29
VBP1-203ENST00000535916 NPVFQ9HCQ7 196 aa0.77□□□□□ -2.29
VBP1-203ENST00000535916 ARL2-SNX15V9GYD0 113 aa0.77□□□□□ -2.29
VBP1-203ENST00000535916 MYO3AQ8NEV4 1616 aa0.77□□□□□ -2.29
VBP1-203ENST00000535916 CLTCQ00610 1675 aaKnown RBP0.77□□□□□ -2.29
VBP1-203ENST00000535916 NUP188Q5SRE5 1749 aa0.77□□□□□ -2.29
VBP1-203ENST00000535916 SBF2Q86WG5 1849 aa0.77□□□□□ -2.29
VBP1-203ENST00000535916 SPAG17Q6Q759 2223 aa0.77□□□□□ -2.29
VBP1-203ENST00000535916 TCHHQ07283 1943 aa0.76□□□□□ -2.29
VBP1-203ENST00000535916 NLRP1Q9C000 1473 aa0.76□□□□□ -2.29
VBP1-203ENST00000535916 A0A0G2JND7 137 aa0.76□□□□□ -2.29
VBP1-203ENST00000535916 PVALEFA0A1B0GWK0 134 aa0.76□□□□□ -2.29
VBP1-203ENST00000535916 FAM223BA6NKX1 122 aa0.76□□□□□ -2.29
VBP1-203ENST00000535916 TRAPPC2P0DI81 140 aa0.76□□□□□ -2.29
VBP1-203ENST00000535916 TRAPPC2BP0DI82 140 aa0.76□□□□□ -2.29
VBP1-203ENST00000535916 SAA2P0DJI9 122 aaPredicted RBP0.76□□□□□ -2.29
VBP1-203ENST00000535916 Q9H521 79 aa0.76□□□□□ -2.29
VBP1-203ENST00000535916 LAMC1P11047 1609 aa0.75□□□□□ -2.29
VBP1-203ENST00000535916 KIAA0100Q14667 2235 aaKnown RBP0.75□□□□□ -2.29
VBP1-203ENST00000535916 TRBV25-1A0A075B6N4 114 aa0.75□□□□□ -2.29
VBP1-203ENST00000535916 MGPP08493 103 aa0.75□□□□□ -2.29
VBP1-203ENST00000535916 FAM103A1Q9BTL3 118 aaKnown RBP0.75□□□□□ -2.29
VBP1-203ENST00000535916 LRP6O75581 1613 aa0.75□□□□□ -2.29
VBP1-203ENST00000535916 ATP10BO94823 1461 aa0.74□□□□□ -2.29
VBP1-203ENST00000535916 POLA1P09884 1462 aaPredicted RBP0.74□□□□□ -2.29
VBP1-203ENST00000535916 GYPAP02724 150 aa0.74□□□□□ -2.29
VBP1-203ENST00000535916 C20orf78Q9BR46 151 aa0.74□□□□□ -2.29
VBP1-203ENST00000535916 M0R3E3 92 aa0.73□□□□□ -2.29
VBP1-203ENST00000535916 PIN1P1O15428 100 aa0.73□□□□□ -2.29
VBP1-203ENST00000535916 NMBP08949 121 aa0.73□□□□□ -2.29
VBP1-203ENST00000535916 FAUP35544 74 aaKnown RBP0.73□□□□□ -2.29
VBP1-203ENST00000535916 ABCC2Q92887 1545 aa0.73□□□□□ -2.29
VBP1-203ENST00000535916 IQSEC2Q5JU85 1478 aa0.73□□□□□ -2.29
VBP1-203ENST00000535916 KDM3BQ7LBC6 1761 aa0.73□□□□□ -2.29
VBP1-203ENST00000535916 UBR1Q8IWV7 1749 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms