RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 CLRN3Q8NCR9 226 aa14.43□□□□□ -0.1
SSPN-204ENST00000535504 USP17L23D6RBM5 183 aa14.42□□□□□ -0.1
SSPN-204ENST00000535504 WFDC2Q14508 124 aa14.42□□□□□ -0.1
SSPN-204ENST00000535504 SNAPINO95295 136 aa14.41□□□□□ -0.1
SSPN-204ENST00000535504 APOC3P02656 99 aa14.41□□□□□ -0.1
SSPN-204ENST00000535504 SS18Q15532 418 aa14.41□□□□□ -0.1
SSPN-204ENST00000535504 CFAP161Q6P656 301 aa14.41□□□□□ -0.1
SSPN-204ENST00000535504 SVBPQ8N300 66 aa14.41□□□□□ -0.1
SSPN-204ENST00000535504 ZNF664Q8N3J9 261 aa14.39□□□□□ -0.11
SSPN-204ENST00000535504 AP5S1Q9NUS5 200 aa14.39□□□□□ -0.11
SSPN-204ENST00000535504 CSDC2Q9Y534 153 aaKnown RBP14.39□□□□□ -0.11
SSPN-204ENST00000535504 LOC389332A0A1B0GUA5 103 aa14.38□□□□□ -0.11
SSPN-204ENST00000535504 GAGE12HA6NDE8 117 aa14.38□□□□□ -0.11
SSPN-204ENST00000535504 CHCHD10Q8WYQ3 142 aaPredicted RBP14.38□□□□□ -0.11
SSPN-204ENST00000535504 TIMM21Q9BVV7 248 aa14.37□□□□□ -0.11
SSPN-204ENST00000535504 CDC42SE2Q9NRR3 84 aa14.37□□□□□ -0.11
SSPN-204ENST00000535504 DYNC1H1Q14204 4646 aaKnown RBP14.37□□□□□ -0.11
SSPN-204ENST00000535504 MT-ND6P03923 174 aa14.36□□□□□ -0.11
SSPN-204ENST00000535504 GNB1LQ9BYB4 327 aa14.36□□□□□ -0.11
SSPN-204ENST00000535504 UBE2D4Q9Y2X8 147 aa14.36□□□□□ -0.11
SSPN-204ENST00000535504 CCL25O15444 150 aa14.35□□□□□ -0.11
SSPN-204ENST00000535504 KRTAP10-1P60331 282 aa14.35□□□□□ -0.11
SSPN-204ENST00000535504 NXT2Q9NPJ8 142 aaKnown RBP14.35□□□□□ -0.11
SSPN-204ENST00000535504 SPANXA1Q9NS26 97 aa14.35□□□□□ -0.11
SSPN-204ENST00000535504 LINC00959A0A1B0GUT2 108 aa14.34□□□□□ -0.11
SSPN-204ENST00000535504 hDV102S1A0JD36 115 aa14.34□□□□□ -0.11
SSPN-204ENST00000535504 PRSS47A8MTI9 375 aa14.34□□□□□ -0.11
SSPN-204ENST00000535504 G0S2P27469 103 aa14.34□□□□□ -0.11
SSPN-204ENST00000535504 IFI27P40305 119 aaPredicted RBP14.34□□□□□ -0.11
SSPN-204ENST00000535504 KRTAP26-1Q6PEX3 210 aa14.34□□□□□ -0.11
SSPN-204ENST00000535504 Q8N8P6 123 aa14.34□□□□□ -0.11
SSPN-204ENST00000535504 K7EMI3 77 aa14.33□□□□□ -0.12
SSPN-204ENST00000535504 XCL1P47992 114 aa14.33□□□□□ -0.12
SSPN-204ENST00000535504 ORMDL2Q53FV1 153 aa14.33□□□□□ -0.12
SSPN-204ENST00000535504 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.32□□□□□ -0.12
SSPN-204ENST00000535504 C1orf196B1AJZ1 125 aa14.32□□□□□ -0.12
SSPN-204ENST00000535504 RPL39P62891 51 aaKnown RBP14.31□□□□□ -0.12
SSPN-204ENST00000535504 PRSS1P07477 247 aa14.3□□□□□ -0.12
SSPN-204ENST00000535504 KIAA1644Q3SXP7 199 aa14.3□□□□□ -0.12
SSPN-204ENST00000535504 TRAV13-1A0A0B4J241 112 aa14.29□□□□□ -0.12
SSPN-204ENST00000535504 FABP9Q0Z7S8 132 aa14.29□□□□□ -0.12
SSPN-204ENST00000535504 CD164L2Q6UWJ8 174 aa14.29□□□□□ -0.12
SSPN-204ENST00000535504 Q6ZUT4 128 aa14.29□□□□□ -0.12
SSPN-204ENST00000535504 CYSLTR1Q9Y271 337 aa14.29□□□□□ -0.12
SSPN-204ENST00000535504 MALP21145 153 aa14.28□□□□□ -0.12
SSPN-204ENST00000535504 RNASE13Q5GAN3 156 aaKnown RBP14.28□□□□□ -0.12
SSPN-204ENST00000535504 PRSS3P2Q8NHM4 247 aa14.28□□□□□ -0.12
SSPN-204ENST00000535504 MRPS36P82909 103 aaKnown RBP14.27□□□□□ -0.13
SSPN-204ENST00000535504 Q6ZN92 141 aa14.27□□□□□ -0.13
SSPN-204ENST00000535504 MRPL18Q9H0U6 180 aaKnown RBP14.27□□□□□ -0.13
SSPN-204ENST00000535504 KIAA1109Q2LD37 5005 aa14.25□□□□□ -0.13
SSPN-204ENST00000535504 IGHV1-58A0A0C4DH39 117 aa14.25□□□□□ -0.13
SSPN-204ENST00000535504 IFITM10A6NMD0 228 aa14.25□□□□□ -0.13
SSPN-204ENST00000535504 FOXI1Q12951 378 aa14.25□□□□□ -0.13
SSPN-204ENST00000535504 PYGO1Q9Y3Y4 419 aa14.25□□□□□ -0.13
SSPN-204ENST00000535504 TRAPPC1Q9Y5R8 145 aa14.25□□□□□ -0.13
SSPN-204ENST00000535504 LRP1BQ9NZR2 4599 aa14.24□□□□□ -0.13
SSPN-204ENST00000535504 COX7A2LO14548 114 aa14.24□□□□□ -0.13
SSPN-204ENST00000535504 C2orf66Q6UXQ4 117 aa14.24□□□□□ -0.13
SSPN-204ENST00000535504 TMEM141Q96I45 108 aa14.24□□□□□ -0.13
SSPN-204ENST00000535504 C2orf88Q9BSF0 95 aa14.24□□□□□ -0.13
SSPN-204ENST00000535504 SMCO4Q9NRQ5 59 aa14.24□□□□□ -0.13
SSPN-204ENST00000535504 TGIF2-C20orf24A0A0A6YYL0 155 aa14.23□□□□□ -0.13
SSPN-204ENST00000535504 APOMO95445 188 aa14.23□□□□□ -0.13
SSPN-204ENST00000535504 CNBPP62633 177 aaKnown RBP14.23□□□□□ -0.13
SSPN-204ENST00000535504 LINC01620Q4KN68 170 aa14.23□□□□□ -0.13
SSPN-204ENST00000535504 HIGD2BQ4VC39 106 aa14.23□□□□□ -0.13
SSPN-204ENST00000535504 PAPPA-AS1Q5QFB9 102 aa14.23□□□□□ -0.13
SSPN-204ENST00000535504 LINC01549A6NIU2 74 aa14.22□□□□□ -0.13
SSPN-204ENST00000535504 ZNF561-AS1K7EIQ3 104 aa14.22□□□□□ -0.13
SSPN-204ENST00000535504 TEX43Q6ZNM6 134 aa14.22□□□□□ -0.13
SSPN-204ENST00000535504 FA2HQ7L5A8 372 aa14.22□□□□□ -0.13
SSPN-204ENST00000535504 C9orf163Q8N9P6 203 aa14.22□□□□□ -0.13
SSPN-204ENST00000535504 IGHV3-64A0A075B6Q5 118 aa14.21□□□□□ -0.13
SSPN-204ENST00000535504 XGP55808 180 aa14.21□□□□□ -0.13
SSPN-204ENST00000535504 Q8N1X5 172 aa14.21□□□□□ -0.13
SSPN-204ENST00000535504 C15orf56Q8N910 161 aa14.21□□□□□ -0.13
SSPN-204ENST00000535504 ALKBH7Q9BT30 221 aaPredicted RBP14.21□□□□□ -0.13
SSPN-204ENST00000535504 PKIGQ9Y2B9 76 aa14.21□□□□□ -0.13
SSPN-204ENST00000535504 DNAH5Q8TE73 4624 aa14.2□□□□□ -0.14
SSPN-204ENST00000535504 GVQW2A0A096LPI5 108 aaPredicted RBP14.2□□□□□ -0.14
SSPN-204ENST00000535504 NPSP0C0P6 89 aa14.2□□□□□ -0.14
SSPN-204ENST00000535504 OPRPNQ99935 248 aaPredicted RBP14.19□□□□□ -0.14
SSPN-204ENST00000535504 VCX2Q9H322 139 aa14.19□□□□□ -0.14
SSPN-204ENST00000535504 IGLV4-3A0A075B6K6 122 aa14.17□□□□□ -0.14
SSPN-204ENST00000535504 EPM2AB3EWF7 344 aa14.17□□□□□ -0.14
SSPN-204ENST00000535504 FAM229AH3BQW9 127 aa14.17□□□□□ -0.14
SSPN-204ENST00000535504 Q6ZSA8 131 aa14.17□□□□□ -0.14
SSPN-204ENST00000535504 FAM30AQ9NZY2 134 aa14.17□□□□□ -0.14
SSPN-204ENST00000535504 HERC2O95714 4834 aa14.16□□□□□ -0.14
SSPN-204ENST00000535504 C5orf38Q86SI9 138 aa14.16□□□□□ -0.14
SSPN-204ENST00000535504 SLC7A5P1Q8MH63 180 aa14.15□□□□□ -0.14
SSPN-204ENST00000535504 DPH3Q96FX2 82 aa14.15□□□□□ -0.14
SSPN-204ENST00000535504 RAB5BP61020 215 aa14.14□□□□□ -0.15
SSPN-204ENST00000535504 HAMPP81172 84 aa14.14□□□□□ -0.15
SSPN-204ENST00000535504 TOMM6Q96B49 74 aa14.14□□□□□ -0.15
SSPN-204ENST00000535504 SCGB3A1Q96QR1 104 aa14.14□□□□□ -0.15
SSPN-204ENST00000535504 TIMM17AQ99595 171 aa14.14□□□□□ -0.15
SSPN-204ENST00000535504 CHAC1Q9BUX1 264 aa14.14□□□□□ -0.15
SSPN-204ENST00000535504 SEC11AP67812 179 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms