RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 POLR2KP53803 58 aaKnown RBP3.56□□□□□ -1.84
SNHG1-201ENST00000535076 RPL36AP83881 106 aaKnown RBP3.56□□□□□ -1.84
SNHG1-201ENST00000535076 MIR7-3HGQ8N6C7 128 aa3.56□□□□□ -1.84
SNHG1-201ENST00000535076 RETNLBQ9BQ08 111 aa3.56□□□□□ -1.84
SNHG1-201ENST00000535076 NDUFA4L2Q9NRX3 87 aa3.56□□□□□ -1.84
SNHG1-201ENST00000535076 MSRB1Q9NZV6 116 aa3.56□□□□□ -1.84
SNHG1-201ENST00000535076 USF3Q68DE3 2245 aa3.56□□□□□ -1.84
SNHG1-201ENST00000535076 MED13Q9UHV7 2174 aa3.56□□□□□ -1.84
SNHG1-201ENST00000535076 ARHGAP32A7KAX9 2087 aa3.56□□□□□ -1.84
SNHG1-201ENST00000535076 UNC13CQ8NB66 2214 aa3.55□□□□□ -1.84
SNHG1-201ENST00000535076 IGLV1-51P01701 117 aa3.55□□□□□ -1.84
SNHG1-201ENST00000535076 CLPSP04118 112 aa3.55□□□□□ -1.84
SNHG1-201ENST00000535076 BSPH1Q075Z2 132 aa3.55□□□□□ -1.84
SNHG1-201ENST00000535076 WFDC9Q8NEX5 89 aa3.55□□□□□ -1.84
SNHG1-201ENST00000535076 S4R3C0 116 aa3.55□□□□□ -1.84
SNHG1-201ENST00000535076 CACNA1DQ01668 2161 aa3.55□□□□□ -1.84
SNHG1-201ENST00000535076 IGHV3-72A0A0B4J1Y9 119 aa3.54□□□□□ -1.84
SNHG1-201ENST00000535076 TRAV21A0A0B4J279 112 aa3.54□□□□□ -1.84
SNHG1-201ENST00000535076 IGKV3D-20A0A0C4DH25 116 aa3.54□□□□□ -1.84
SNHG1-201ENST00000535076 PINLYPA6NC86 204 aa3.54□□□□□ -1.84
SNHG1-201ENST00000535076 A8MU10 97 aa3.54□□□□□ -1.84
SNHG1-201ENST00000535076 GNLYP22749 145 aa3.54□□□□□ -1.84
SNHG1-201ENST00000535076 LCE1AQ5T7P2 110 aa3.54□□□□□ -1.84
SNHG1-201ENST00000535076 Q6ZQT0 140 aa3.54□□□□□ -1.84
SNHG1-201ENST00000535076 Q8N814 137 aa3.54□□□□□ -1.84
SNHG1-201ENST00000535076 PLAC8Q9NZF1 115 aa3.54□□□□□ -1.84
SNHG1-201ENST00000535076 GOLGB1Q14789 3259 aaKnown RBP3.53□□□□□ -1.84
SNHG1-201ENST00000535076 DSCAML1Q8TD84 2053 aa3.53□□□□□ -1.84
SNHG1-201ENST00000535076 LY6G6EA0A0G2JKS1 128 aa3.53□□□□□ -1.84
SNHG1-201ENST00000535076 IGHV7-4-1A0A0J9YVY3 117 aa3.53□□□□□ -1.84
SNHG1-201ENST00000535076 H3BRN7 92 aa3.53□□□□□ -1.84
SNHG1-201ENST00000535076 IGHV3-43DP0DP04 118 aa3.53□□□□□ -1.84
SNHG1-201ENST00000535076 NANOS2P60321 138 aaKnown RBP3.53□□□□□ -1.84
SNHG1-201ENST00000535076 CNBPP62633 177 aaKnown RBP3.53□□□□□ -1.84
SNHG1-201ENST00000535076 RPL36ALQ969Q0 106 aaKnown RBP3.53□□□□□ -1.84
SNHG1-201ENST00000535076 PRR15LQ9BU68 103 aa3.53□□□□□ -1.84
SNHG1-201ENST00000535076 LENEPQ9Y5L5 61 aa3.53□□□□□ -1.84
SNHG1-201ENST00000535076 LINC01558Q9Y6Z2 57 aa3.53□□□□□ -1.84
SNHG1-201ENST00000535076 KNTC1P50748 2209 aa3.53□□□□□ -1.84
SNHG1-201ENST00000535076 UTRNP46939 3433 aa3.53□□□□□ -1.85
SNHG1-201ENST00000535076 IGLV5-45A0A087WSX0 123 aa3.52□□□□□ -1.85
SNHG1-201ENST00000535076 TRBV10-1A0A0K0K1A3 114 aa3.52□□□□□ -1.85
SNHG1-201ENST00000535076 H3BPC8 53 aa3.52□□□□□ -1.85
SNHG1-201ENST00000535076 NCR3O14931 201 aa3.52□□□□□ -1.85
SNHG1-201ENST00000535076 LY6G6DO95868 133 aa3.52□□□□□ -1.85
SNHG1-201ENST00000535076 CRPP02741 224 aa3.52□□□□□ -1.85
SNHG1-201ENST00000535076 CCL5P13501 91 aa3.52□□□□□ -1.85
SNHG1-201ENST00000535076 C9orf129Q5T035 196 aaKnown RBP3.52□□□□□ -1.85
SNHG1-201ENST00000535076 B9D2Q9BPU9 175 aa3.52□□□□□ -1.85
SNHG1-201ENST00000535076 KLK9Q9UKQ9 250 aa3.52□□□□□ -1.85
SNHG1-201ENST00000535076 PI4KAP42356 2102 aa3.52□□□□□ -1.85
SNHG1-201ENST00000535076 NOTCH4Q99466 2003 aa3.51□□□□□ -1.85
SNHG1-201ENST00000535076 IGHV1OR15-1A0A075B7D0 117 aa3.51□□□□□ -1.85
SNHG1-201ENST00000535076 IGKV2-29A2NJV5 120 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-201ENST00000535076 RTL8CO15255 209 aa3.51□□□□□ -1.85
SNHG1-201ENST00000535076 IGKV3-11P04433 115 aa3.51□□□□□ -1.85
SNHG1-201ENST00000535076 TMEM167AQ8TBQ9 72 aa3.51□□□□□ -1.85
SNHG1-201ENST00000535076 FAM104AQ969W3 186 aa3.51□□□□□ -1.85
SNHG1-201ENST00000535076 HIGD2AQ9BW72 106 aa3.51□□□□□ -1.85
SNHG1-201ENST00000535076 FGF23Q9GZV9 251 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-201ENST00000535076 A0A087WYN8 130 aa3.5□□□□□ -1.85
SNHG1-201ENST00000535076 IGHV3-73A0A0B4J1V6 119 aa3.5□□□□□ -1.85
SNHG1-201ENST00000535076 IGHV3-35A0A0C4DH35 117 aa3.5□□□□□ -1.85
SNHG1-201ENST00000535076 IGLV5-39A0A0G2JS06 123 aa3.5□□□□□ -1.85
SNHG1-201ENST00000535076 H0YGG7 62 aa3.5□□□□□ -1.85
SNHG1-201ENST00000535076 ROMO1P60602 79 aa3.5□□□□□ -1.85
SNHG1-201ENST00000535076 HAMPP81172 84 aa3.5□□□□□ -1.85
SNHG1-201ENST00000535076 SUMO4Q6EEV6 95 aa3.5□□□□□ -1.85
SNHG1-201ENST00000535076 FLVCR1-AS1Q8TAF5 88 aa3.5□□□□□ -1.85
SNHG1-201ENST00000535076 LINC00208Q96KT6 92 aa3.5□□□□□ -1.85
SNHG1-201ENST00000535076 SND1-IT1Q9HBX3 110 aa3.5□□□□□ -1.85
SNHG1-201ENST00000535076 ZGRF1Q86YA3 2104 aa3.49□□□□□ -1.85
SNHG1-201ENST00000535076 IGLV4-3A0A075B6K6 122 aa3.49□□□□□ -1.85
SNHG1-201ENST00000535076 IGHV3OR16-12A0A075B7B8 117 aa3.49□□□□□ -1.85
SNHG1-201ENST00000535076 STATHP02808 62 aa3.49□□□□□ -1.85
SNHG1-201ENST00000535076 NDPQ00604 133 aa3.49□□□□□ -1.85
SNHG1-201ENST00000535076 C20orf203Q8NBC4 194 aa3.49□□□□□ -1.85
SNHG1-201ENST00000535076 MUC4Q99102 2169 aa3.49□□□□□ -1.85
SNHG1-201ENST00000535076 IGHV3-49A0A0A0MS15 119 aa3.48□□□□□ -1.85
SNHG1-201ENST00000535076 LRCOL1A6NCL2 159 aa3.48□□□□□ -1.85
SNHG1-201ENST00000535076 KRTAP16-1A8MUX0 517 aa3.48□□□□□ -1.85
SNHG1-201ENST00000535076 B4DSR2 109 aa3.48□□□□□ -1.85
SNHG1-201ENST00000535076 LECT2O14960 151 aa3.48□□□□□ -1.85
SNHG1-201ENST00000535076 ATP6V0E1O15342 81 aa3.48□□□□□ -1.85
SNHG1-201ENST00000535076 SMIM11BQ8TCY0 68 aa3.48□□□□□ -1.85
SNHG1-201ENST00000535076 IGHV3-48P01763 117 aa3.47□□□□□ -1.85
SNHG1-201ENST00000535076 CCL3P10147 92 aa3.47□□□□□ -1.85
SNHG1-201ENST00000535076 WT1-ASQ06250 92 aa3.47□□□□□ -1.85
SNHG1-201ENST00000535076 NNATQ16517 81 aa3.47□□□□□ -1.85
SNHG1-201ENST00000535076 C1orf134Q5TEV5 83 aa3.47□□□□□ -1.85
SNHG1-201ENST00000535076 NTM-AS1Q6ZSK4 140 aa3.47□□□□□ -1.85
SNHG1-201ENST00000535076 ZFAND2AQ8N6M9 145 aa3.47□□□□□ -1.85
SNHG1-201ENST00000535076 MUC7Q8TAX7 377 aa3.47□□□□□ -1.85
SNHG1-201ENST00000535076 IGHV3OR16-8A0A075B7F1 116 aa3.46□□□□□ -1.86
SNHG1-201ENST00000535076 IGKV3D-15A0A087WSY6 115 aa3.46□□□□□ -1.86
SNHG1-201ENST00000535076 IGKV3D-11A0A0A0MRZ8 115 aa3.46□□□□□ -1.86
SNHG1-201ENST00000535076 IGKV4-1P06312 121 aa3.46□□□□□ -1.86
SNHG1-201ENST00000535076 CGB3P0DN86 165 aa3.46□□□□□ -1.86
SNHG1-201ENST00000535076 CGB7P0DN87 165 aa3.46□□□□□ -1.86
SNHG1-201ENST00000535076 LYZP61626 148 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms