RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 CEMP1Q6PRD7 247 aaPredicted RBP14.18□□□□□ -0.14
TNFRSF1A-205ENST00000534885 C11orf45Q8TAV5 145 aa14.18□□□□□ -0.14
TNFRSF1A-205ENST00000534885 ORAOV1Q8WV07 137 aa14.18□□□□□ -0.14
TNFRSF1A-205ENST00000534885 GTSF1LQ9H1H1 148 aa14.18□□□□□ -0.14
TNFRSF1A-205ENST00000534885 ZC2HC1BQ5TFG8 222 aa14.17□□□□□ -0.14
TNFRSF1A-205ENST00000534885 ATP6V0E2Q8NHE4 81 aa14.17□□□□□ -0.14
TNFRSF1A-205ENST00000534885 TMEM141Q96I45 108 aa14.16□□□□□ -0.14
TNFRSF1A-205ENST00000534885 B9D2Q9BPU9 175 aa14.16□□□□□ -0.14
TNFRSF1A-205ENST00000534885 UBE2D4Q9Y2X8 147 aa14.16□□□□□ -0.14
TNFRSF1A-205ENST00000534885 FAM104AQ969W3 186 aa14.15□□□□□ -0.14
TNFRSF1A-205ENST00000534885 K7EP13 123 aa14.14□□□□□ -0.15
TNFRSF1A-205ENST00000534885 IGLV4-3A0A075B6K6 122 aa14.14□□□□□ -0.15
TNFRSF1A-205ENST00000534885 A0A087WX48 190 aa14.14□□□□□ -0.15
TNFRSF1A-205ENST00000534885 TRBV6-8A0A0A6YYG3 113 aa14.14□□□□□ -0.15
TNFRSF1A-205ENST00000534885 SLC25A34Q6PIV7 304 aa14.14□□□□□ -0.15
TNFRSF1A-205ENST00000534885 MRPL35Q9NZE8 188 aaKnown RBP14.14□□□□□ -0.15
TNFRSF1A-205ENST00000534885 PYGO1Q9Y3Y4 419 aa14.14□□□□□ -0.15
TNFRSF1A-205ENST00000534885 TRBV25-1A0A075B6N4 114 aa14.13□□□□□ -0.15
TNFRSF1A-205ENST00000534885 TRAV12-1A0A0B4J245 112 aa14.13□□□□□ -0.15
TNFRSF1A-205ENST00000534885 PRSS29PA6NIE9 313 aa14.13□□□□□ -0.15
TNFRSF1A-205ENST00000534885 TMEM243Q9BU79 118 aa14.13□□□□□ -0.15
TNFRSF1A-205ENST00000534885 COX11Q9Y6N1 276 aa14.13□□□□□ -0.15
TNFRSF1A-205ENST00000534885 SPANXA1Q9NS26 97 aa14.12□□□□□ -0.15
TNFRSF1A-205ENST00000534885 MEGF8Q7Z7M0 2845 aa14.12□□□□□ -0.15
TNFRSF1A-205ENST00000534885 RNASE13Q5GAN3 156 aaKnown RBP14.11□□□□□ -0.15
TNFRSF1A-205ENST00000534885 TP73-AS1Q9UF72 201 aa14.11□□□□□ -0.15
TNFRSF1A-205ENST00000534885 PRKDCP78527 4128 aaKnown RBP14.11□□□□□ -0.15
TNFRSF1A-205ENST00000534885 PMVKQ15126 192 aa14.11□□□□□ -0.15
TNFRSF1A-205ENST00000534885 CST9LQ9H4G1 147 aa14.11□□□□□ -0.15
TNFRSF1A-205ENST00000534885 FGF6P10767 208 aa14.1□□□□□ -0.15
TNFRSF1A-205ENST00000534885 MRPL23Q16540 153 aaKnown RBP14.1□□□□□ -0.15
TNFRSF1A-205ENST00000534885 ICOSQ9Y6W8 199 aa14.1□□□□□ -0.15
TNFRSF1A-205ENST00000534885 STAB2Q8WWQ8 2551 aa14.1□□□□□ -0.15
TNFRSF1A-205ENST00000534885 DEFB131BA0A096LNP1 70 aa14.1□□□□□ -0.15
TNFRSF1A-205ENST00000534885 Q6ZUT4 128 aa14.1□□□□□ -0.15
TNFRSF1A-205ENST00000534885 F8VRH5 84 aa14.09□□□□□ -0.15
TNFRSF1A-205ENST00000534885 MPV17L2Q567V2 206 aa14.09□□□□□ -0.15
TNFRSF1A-205ENST00000534885 TMEM97Q5BJF2 176 aa14.09□□□□□ -0.15
TNFRSF1A-205ENST00000534885 Q6ZVH6 145 aa14.09□□□□□ -0.15
TNFRSF1A-205ENST00000534885 UBE2L6O14933 153 aa14.08□□□□□ -0.15
TNFRSF1A-205ENST00000534885 DPM2O94777 84 aa14.08□□□□□ -0.15
TNFRSF1A-205ENST00000534885 TIMM21Q9BVV7 248 aa14.08□□□□□ -0.15
TNFRSF1A-205ENST00000534885 IGKCP01834 107 aa14.08□□□□□ -0.16
TNFRSF1A-205ENST00000534885 CHCHD5Q9BSY4 110 aa14.08□□□□□ -0.16
TNFRSF1A-205ENST00000534885 VCX2Q9H322 139 aa14.08□□□□□ -0.16
TNFRSF1A-205ENST00000534885 GAGE6Q13070 117 aa14.07□□□□□ -0.16
TNFRSF1A-205ENST00000534885 PTTG1IPP53801 180 aa14.06□□□□□ -0.16
TNFRSF1A-205ENST00000534885 BVES-AS1Q5T3Y7 98 aa14.06□□□□□ -0.16
TNFRSF1A-205ENST00000534885 DGAT2L7PQ6IED9 249 aa14.06□□□□□ -0.16
TNFRSF1A-205ENST00000534885 AMELXQ99217 191 aa14.06□□□□□ -0.16
TNFRSF1A-205ENST00000534885 IGLV4-69A0A075B6H9 119 aa14.06□□□□□ -0.16
TNFRSF1A-205ENST00000534885 H3BNG1 76 aa14.06□□□□□ -0.16
TNFRSF1A-205ENST00000534885 CCL25O15444 150 aa14.06□□□□□ -0.16
TNFRSF1A-205ENST00000534885 UBE2V1Q13404 147 aa14.06□□□□□ -0.16
TNFRSF1A-205ENST00000534885 PAPPA-AS1Q5QFB9 102 aa14.06□□□□□ -0.16
TNFRSF1A-205ENST00000534885 COX8AP10176 69 aa14.05□□□□□ -0.16
TNFRSF1A-205ENST00000534885 H7C423 109 aa14.05□□□□□ -0.16
TNFRSF1A-205ENST00000534885 MRPS36P82909 103 aaKnown RBP14.05□□□□□ -0.16
TNFRSF1A-205ENST00000534885 AMMECR1LQ6DCA0 310 aa14.05□□□□□ -0.16
TNFRSF1A-205ENST00000534885 CSDC2Q9Y534 153 aaKnown RBP14.05□□□□□ -0.16
TNFRSF1A-205ENST00000534885 PLNP26678 52 aa14.04□□□□□ -0.16
TNFRSF1A-205ENST00000534885 TCTAP57738 103 aa14.04□□□□□ -0.16
TNFRSF1A-205ENST00000534885 SH2D6Q7Z4S9 175 aa14.03□□□□□ -0.16
TNFRSF1A-205ENST00000534885 OR5A1Q8NGJ0 315 aa14.03□□□□□ -0.16
TNFRSF1A-205ENST00000534885 TRAV10A0A0B4J240 114 aa14.03□□□□□ -0.16
TNFRSF1A-205ENST00000534885 C11orf86A6NJI1 115 aa14.02□□□□□ -0.16
TNFRSF1A-205ENST00000534885 CDC42SE2Q9NRR3 84 aa14.02□□□□□ -0.16
TNFRSF1A-205ENST00000534885 IGLV4-60A0A075B6I1 120 aa14.01□□□□□ -0.17
TNFRSF1A-205ENST00000534885 TAX1BP3O14907 124 aa14.01□□□□□ -0.17
TNFRSF1A-205ENST00000534885 SMAGPQ0VAQ4 97 aa14.01□□□□□ -0.17
TNFRSF1A-205ENST00000534885 TMEM101Q96IK0 257 aa14□□□□□ -0.17
TNFRSF1A-205ENST00000534885 A0A0J9YXV3 536 aa14□□□□□ -0.17
TNFRSF1A-205ENST00000534885 LYPD5Q6UWN5 251 aa14□□□□□ -0.17
TNFRSF1A-205ENST00000534885 C2orf91Q6ZV80 131 aa14□□□□□ -0.17
TNFRSF1A-205ENST00000534885 TMEM238C9JI98 176 aa13.99□□□□□ -0.17
TNFRSF1A-205ENST00000534885 TMEM262E9PQX1 116 aa13.99□□□□□ -0.17
TNFRSF1A-205ENST00000534885 NHLRC4P0CG21 123 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF1A-205ENST00000534885 LELP1Q5T871 98 aa13.99□□□□□ -0.17
TNFRSF1A-205ENST00000534885 CHAC1Q9BUX1 264 aa13.99□□□□□ -0.17
TNFRSF1A-205ENST00000534885 VAMP3Q15836 100 aa13.98□□□□□ -0.17
TNFRSF1A-205ENST00000534885 NFE4Q86UQ8 179 aa13.98□□□□□ -0.17
TNFRSF1A-205ENST00000534885 Q8N3U1 123 aa13.97□□□□□ -0.17
TNFRSF1A-205ENST00000534885 UBE2D1P51668 147 aa13.97□□□□□ -0.17
TNFRSF1A-205ENST00000534885 A6NJY4 79 aa13.96□□□□□ -0.17
TNFRSF1A-205ENST00000534885 IGKV2D-26A0A0A0MRZ7 120 aa13.95□□□□□ -0.18
TNFRSF1A-205ENST00000534885 TRAV13-1A0A0B4J241 112 aa13.95□□□□□ -0.18
TNFRSF1A-205ENST00000534885 A0A1B0GUV1 79 aa13.95□□□□□ -0.18
TNFRSF1A-205ENST00000534885 TMEM170BQ5T4T1 132 aa13.95□□□□□ -0.18
TNFRSF1A-205ENST00000534885 BOD1L2Q8IYS8 172 aa13.94□□□□□ -0.18
TNFRSF1A-205ENST00000534885 TIRAPP58753 221 aa13.94□□□□□ -0.18
TNFRSF1A-205ENST00000534885 ESRGQ1W209 222 aa13.94□□□□□ -0.18
TNFRSF1A-205ENST00000534885 RNF151Q2KHN1 245 aa13.94□□□□□ -0.18
TNFRSF1A-205ENST00000534885 VPS25Q9BRG1 176 aa13.94□□□□□ -0.18
TNFRSF1A-205ENST00000534885 ZNF22P17026 224 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF1A-205ENST00000534885 NMUP48645 174 aa13.93□□□□□ -0.18
TNFRSF1A-205ENST00000534885 IGKV3OR2-268A0A0C4DH90 116 aa13.92□□□□□ -0.18
TNFRSF1A-205ENST00000534885 TINCRA0A1B0GVN0 87 aa13.92□□□□□ -0.18
TNFRSF1A-205ENST00000534885 SEC11AP67812 179 aa13.92□□□□□ -0.18
TNFRSF1A-205ENST00000534885 IGLL5B9A064 214 aa13.91□□□□□ -0.18
TNFRSF1A-205ENST00000534885 LINC00242Q5T6M2 205 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms