RNA–Protein interactions for RNA: ENST00000534300.5

AMBRA1-212, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-212ENST00000534300 PIK3CD-AS1Q5SR53 167 aa9.1□□□□□ -0.95
AMBRA1-212ENST00000534300 FAM222AQ5U5X8 452 aa9.1□□□□□ -0.95
AMBRA1-212ENST00000534300 TNRC6BQ9UPQ9 1833 aaKnown RBP9.1□□□□□ -0.95
AMBRA1-212ENST00000534300 RNF185Q96GF1 192 aa9.09□□□□□ -0.95
AMBRA1-212ENST00000534300 H0Y9J4 135 aa9.09□□□□□ -0.95
AMBRA1-212ENST00000534300 FAM19A3Q7Z5A8 133 aa9.09□□□□□ -0.95
AMBRA1-212ENST00000534300 TMEM263Q8WUH6 116 aaKnown RBP9.09□□□□□ -0.95
AMBRA1-212ENST00000534300 CRIP1P50238 77 aa9.08□□□□□ -0.96
AMBRA1-212ENST00000534300 UNQ9165/PRO28630Q6UXU0 137 aa9.08□□□□□ -0.96
AMBRA1-212ENST00000534300 ZFAND2AQ8N6M9 145 aa9.08□□□□□ -0.96
AMBRA1-212ENST00000534300 SMIM9A6NGZ8 99 aa9.08□□□□□ -0.96
AMBRA1-212ENST00000534300 ZNF106Q9H2Y7 1883 aaKnown RBP9.08□□□□□ -0.96
AMBRA1-212ENST00000534300 IGHV4OR15-8A0A075B7B6 117 aa9.08□□□□□ -0.96
AMBRA1-212ENST00000534300 A0A087WW49 117 aa9.08□□□□□ -0.96
AMBRA1-212ENST00000534300 MRPS36P82909 103 aaKnown RBP9.08□□□□□ -0.96
AMBRA1-212ENST00000534300 Q8N7P7 452 aa9.08□□□□□ -0.96
AMBRA1-212ENST00000534300 SMAD5-AS1Q9Y6J3 95 aa9.08□□□□□ -0.96
AMBRA1-212ENST00000534300 LINC00694P0DN24 101 aa9.08□□□□□ -0.96
AMBRA1-212ENST00000534300 PRO0255Q9UI72 69 aa9.08□□□□□ -0.96
AMBRA1-212ENST00000534300 ZNF462Q96JM2 2506 aa9.08□□□□□ -0.96
AMBRA1-212ENST00000534300 EIF4EBP1Q13541 118 aaPredicted RBP9.07□□□□□ -0.96
AMBRA1-212ENST00000534300 KLK12Q9UKR0 248 aa9.07□□□□□ -0.96
AMBRA1-212ENST00000534300 SLPIP03973 132 aa9.07□□□□□ -0.96
AMBRA1-212ENST00000534300 Q6YL49 198 aa9.07□□□□□ -0.96
AMBRA1-212ENST00000534300 PYGO1Q9Y3Y4 419 aa9.07□□□□□ -0.96
AMBRA1-212ENST00000534300 TRBV27A0A0K0K1C4 114 aa9.07□□□□□ -0.96
AMBRA1-212ENST00000534300 UBE2AP49459 152 aa9.06□□□□□ -0.96
AMBRA1-212ENST00000534300 CRIP3Q6Q6R5 217 aa9.06□□□□□ -0.96
AMBRA1-212ENST00000534300 LYRM9A8MSI8 78 aa9.06□□□□□ -0.96
AMBRA1-212ENST00000534300 SCXQ7RTU7 201 aa9.06□□□□□ -0.96
AMBRA1-212ENST00000534300 LINC00467Q9BRT7 94 aa9.06□□□□□ -0.96
AMBRA1-212ENST00000534300 TRBV6-5A0A0K0K1A5 114 aa9.06□□□□□ -0.96
AMBRA1-212ENST00000534300 IGKV4-1P06312 121 aa9.06□□□□□ -0.96
AMBRA1-212ENST00000534300 CCL18P55774 89 aa9.06□□□□□ -0.96
AMBRA1-212ENST00000534300 LINC00310P59036 64 aa9.05□□□□□ -0.96
AMBRA1-212ENST00000534300 A6NDX4 124 aa9.05□□□□□ -0.96
AMBRA1-212ENST00000534300 H7C423 109 aa9.05□□□□□ -0.96
AMBRA1-212ENST00000534300 Q6JHZ5 121 aa9.05□□□□□ -0.96
AMBRA1-212ENST00000534300 MSMPQ1L6U9 139 aa9.05□□□□□ -0.96
AMBRA1-212ENST00000534300 Q8N976 141 aa9.05□□□□□ -0.96
AMBRA1-212ENST00000534300 EPG5Q9HCE0 2579 aa9.05□□□□□ -0.96
AMBRA1-212ENST00000534300 M0QY20 66 aa9.04□□□□□ -0.96
AMBRA1-212ENST00000534300 HRCT1Q6UXD1 115 aa9.04□□□□□ -0.96
AMBRA1-212ENST00000534300 LINC00526Q96FQ7 95 aa9.04□□□□□ -0.96
AMBRA1-212ENST00000534300 SNURFQ9Y675 71 aa9.04□□□□□ -0.96
AMBRA1-212ENST00000534300 CCDC140Q96MF4 163 aa9.04□□□□□ -0.96
AMBRA1-212ENST00000534300 HTTP42858 3142 aa9.04□□□□□ -0.96
AMBRA1-212ENST00000534300 MED12LQ86YW9 2145 aa9.04□□□□□ -0.96
AMBRA1-212ENST00000534300 HILS1P60008 231 aa9.04□□□□□ -0.96
AMBRA1-212ENST00000534300 C4orf3Q8WVX3 66 aa9.04□□□□□ -0.96
AMBRA1-212ENST00000534300 PRRC2AP48634 2157 aaKnown RBP9.04□□□□□ -0.96
AMBRA1-212ENST00000534300 ESM1Q9NQ30 184 aa9.03□□□□□ -0.96
AMBRA1-212ENST00000534300 NRACQ8N912 160 aa9.03□□□□□ -0.96
AMBRA1-212ENST00000534300 KLK5Q9Y337 293 aaPredicted RBP9.03□□□□□ -0.96
AMBRA1-212ENST00000534300 ABCA2Q9BZC7 2435 aa9.03□□□□□ -0.96
AMBRA1-212ENST00000534300 IGLV2-11P01706 119 aa9.03□□□□□ -0.96
AMBRA1-212ENST00000534300 C6orf99Q4VX62 202 aa9.03□□□□□ -0.96
AMBRA1-212ENST00000534300 LRP4O75096 1905 aa9.02□□□□□ -0.96
AMBRA1-212ENST00000534300 CCKP06307 115 aa9.02□□□□□ -0.97
AMBRA1-212ENST00000534300 A6NED7 52 aa9.02□□□□□ -0.97
AMBRA1-212ENST00000534300 C22orf34Q6ZV56 151 aa9.02□□□□□ -0.97
AMBRA1-212ENST00000534300 SERP1Q9Y6X1 66 aa9.02□□□□□ -0.97
AMBRA1-212ENST00000534300 ZFYVE26Q68DK2 2539 aa9.01□□□□□ -0.97
AMBRA1-212ENST00000534300 PSMG3-AS1Q96PY0 264 aa9.01□□□□□ -0.97
AMBRA1-212ENST00000534300 K7EQG2 157 aa9□□□□□ -0.97
AMBRA1-212ENST00000534300 DOPEY1Q5JWR5 2465 aa9□□□□□ -0.97
AMBRA1-212ENST00000534300 KRTAP10-9P60411 292 aa9□□□□□ -0.97
AMBRA1-212ENST00000534300 K7ERS5 55 aa9□□□□□ -0.97
AMBRA1-212ENST00000534300 Q6ZS46 218 aa9□□□□□ -0.97
AMBRA1-212ENST00000534300 PRR15LQ9BU68 103 aa8.99□□□□□ -0.97
AMBRA1-212ENST00000534300 TRAV7A0A075B6U4 112 aa8.99□□□□□ -0.97
AMBRA1-212ENST00000534300 UBE2D1P51668 147 aa8.99□□□□□ -0.97
AMBRA1-212ENST00000534300 REG3AQ06141 175 aa8.99□□□□□ -0.97
AMBRA1-212ENST00000534300 Q6ZTI0 123 aa8.99□□□□□ -0.97
AMBRA1-212ENST00000534300 POLR2KP53803 58 aaKnown RBP8.99□□□□□ -0.97
AMBRA1-212ENST00000534300 MAP6D1Q9H9H5 199 aa8.99□□□□□ -0.97
AMBRA1-212ENST00000534300 C1orf229Q6ZS94 237 aaPredicted RBP8.99□□□□□ -0.97
AMBRA1-212ENST00000534300 LINC00269Q8N2A0 174 aa8.99□□□□□ -0.97
AMBRA1-212ENST00000534300 IGF1P05019 195 aa8.98□□□□□ -0.97
AMBRA1-212ENST00000534300 MIFP14174 115 aa8.98□□□□□ -0.97
AMBRA1-212ENST00000534300 CDSNQ15517 529 aa8.98□□□□□ -0.97
AMBRA1-212ENST00000534300 CHCHD10Q8WYQ3 142 aaPredicted RBP8.98□□□□□ -0.97
AMBRA1-212ENST00000534300 CNFNQ9BYD5 112 aa8.98□□□□□ -0.97
AMBRA1-212ENST00000534300 LRRK2Q5S007 2527 aa8.98□□□□□ -0.97
AMBRA1-212ENST00000534300 NUP210LQ5VU65 1888 aa8.97□□□□□ -0.97
AMBRA1-212ENST00000534300 Q6ZQY7 126 aa8.97□□□□□ -0.97
AMBRA1-212ENST00000534300 JMJD1CQ15652 2540 aa8.97□□□□□ -0.97
AMBRA1-212ENST00000534300 ODF3BA8MYP8 253 aa8.97□□□□□ -0.97
AMBRA1-212ENST00000534300 CASC2Q6XLA1 102 aa8.97□□□□□ -0.97
AMBRA1-212ENST00000534300 B9D2Q9BPU9 175 aa8.97□□□□□ -0.97
AMBRA1-212ENST00000534300 ZFAND3Q9H8U3 227 aa8.97□□□□□ -0.97
AMBRA1-212ENST00000534300 FAM19A5Q7Z5A7 132 aaPredicted RBP8.97□□□□□ -0.97
AMBRA1-212ENST00000534300 HIGD2AQ9BW72 106 aa8.97□□□□□ -0.97
AMBRA1-212ENST00000534300 UBE2D3P61077 147 aa8.96□□□□□ -0.97
AMBRA1-212ENST00000534300 UBE2D2P62837 147 aa8.96□□□□□ -0.97
AMBRA1-212ENST00000534300 URB1-AS1Q96HZ7 61 aa8.96□□□□□ -0.97
AMBRA1-212ENST00000534300 Q6ZSV7 163 aa8.96□□□□□ -0.97
AMBRA1-212ENST00000534300 TSHBP01222 138 aa8.96□□□□□ -0.98
AMBRA1-212ENST00000534300 C1orf158Q8N1D5 194 aa8.96□□□□□ -0.98
AMBRA1-212ENST00000534300 SMIM11BQ8TCY0 68 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms