RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 CTRLP40313 264 aa13.24□□□□□ -0.29
SSH3-211ENST00000534112 CT83Q5H943 113 aa13.24□□□□□ -0.29
SSH3-211ENST00000534112 ISOC2Q96AB3 205 aa13.24□□□□□ -0.29
SSH3-211ENST00000534112 OSTCQ9NRP0 149 aa13.24□□□□□ -0.29
SSH3-211ENST00000534112 H7C423 109 aa13.23□□□□□ -0.29
SSH3-211ENST00000534112 NCR2O95944 276 aa13.23□□□□□ -0.29
SSH3-211ENST00000534112 FGF6P10767 208 aa13.23□□□□□ -0.29
SSH3-211ENST00000534112 CNFNQ9BYD5 112 aa13.23□□□□□ -0.29
SSH3-211ENST00000534112 A8MWL6 223 aa13.22□□□□□ -0.29
SSH3-211ENST00000534112 ADIRFQ15847 76 aa13.22□□□□□ -0.29
SSH3-211ENST00000534112 Q6ZRP5 223 aa13.22□□□□□ -0.29
SSH3-211ENST00000534112 RPL39LQ96EH5 51 aaKnown RBP13.22□□□□□ -0.29
SSH3-211ENST00000534112 LINC00526Q96FQ7 95 aa13.22□□□□□ -0.29
SSH3-211ENST00000534112 APCSP02743 223 aa13.21□□□□□ -0.29
SSH3-211ENST00000534112 XCL1P47992 114 aa13.21□□□□□ -0.29
SSH3-211ENST00000534112 PKIGQ9Y2B9 76 aa13.21□□□□□ -0.29
SSH3-211ENST00000534112 OR5A1Q8NGJ0 315 aa13.2□□□□□ -0.3
SSH3-211ENST00000534112 V9GYV3 84 aa13.2□□□□□ -0.3
SSH3-211ENST00000534112 IGHV1-58A0A0C4DH39 117 aa13.19□□□□□ -0.3
SSH3-211ENST00000534112 TSKUQ8WUA8 353 aa13.19□□□□□ -0.3
SSH3-211ENST00000534112 CARD19Q96LW7 228 aa13.19□□□□□ -0.3
SSH3-211ENST00000534112 LINC00959A0A1B0GUT2 108 aa13.18□□□□□ -0.3
SSH3-211ENST00000534112 CCL25O15444 150 aa13.18□□□□□ -0.3
SSH3-211ENST00000534112 ZNF25P17030 456 aaPredicted RBP13.18□□□□□ -0.3
SSH3-211ENST00000534112 FOXA3P55318 350 aaPredicted RBP13.18□□□□□ -0.3
SSH3-211ENST00000534112 SDHAF1A6NFY7 115 aa13.17□□□□□ -0.3
SSH3-211ENST00000534112 GAS8-AS1O95177 125 aa13.17□□□□□ -0.3
SSH3-211ENST00000534112 UQCC3Q6UW78 93 aa13.17□□□□□ -0.3
SSH3-211ENST00000534112 FAM231BA6NCW3 169 aa13.16□□□□□ -0.3
SSH3-211ENST00000534112 TMEM101Q96IK0 257 aa13.16□□□□□ -0.3
SSH3-211ENST00000534112 BTF3L4Q96K17 158 aa13.16□□□□□ -0.3
SSH3-211ENST00000534112 SYCNQ0VAF6 134 aa13.15□□□□□ -0.3
SSH3-211ENST00000534112 SMIM15Q7Z3B0 74 aa13.15□□□□□ -0.3
SSH3-211ENST00000534112 LPAP08519 4548 aa13.15□□□□□ -0.3
SSH3-211ENST00000534112 HIGD1CA8MV81 97 aa13.14□□□□□ -0.31
SSH3-211ENST00000534112 I3L3M4 83 aa13.14□□□□□ -0.31
SSH3-211ENST00000534112 PMCHP20382 165 aa13.14□□□□□ -0.31
SSH3-211ENST00000534112 COMMD7Q86VX2 200 aa13.14□□□□□ -0.31
SSH3-211ENST00000534112 LINC00862A6NCI5 91 aa13.13□□□□□ -0.31
SSH3-211ENST00000534112 ZNF561-AS1K7EIQ3 104 aa13.13□□□□□ -0.31
SSH3-211ENST00000534112 PTTG1IPP53801 180 aa13.13□□□□□ -0.31
SSH3-211ENST00000534112 PNRC1Q12796 327 aaPredicted RBP13.13□□□□□ -0.31
SSH3-211ENST00000534112 ESDP10768 282 aa13.12□□□□□ -0.31
SSH3-211ENST00000534112 SS18Q15532 418 aa13.12□□□□□ -0.31
SSH3-211ENST00000534112 CD164L2Q6UWJ8 174 aa13.12□□□□□ -0.31
SSH3-211ENST00000534112 TRBV6-5A0A0K0K1A5 114 aa13.11□□□□□ -0.31
SSH3-211ENST00000534112 TMEM218A2RU14 115 aa13.11□□□□□ -0.31
SSH3-211ENST00000534112 ADCYAP1P18509 176 aa13.11□□□□□ -0.31
SSH3-211ENST00000534112 GAGE2BQ13066 116 aa13.11□□□□□ -0.31
SSH3-211ENST00000534112 BORCS7Q96B45 105 aa13.11□□□□□ -0.31
SSH3-211ENST00000534112 A0A1B0GUT8 65 aa13.1□□□□□ -0.31
SSH3-211ENST00000534112 A0A1W2PNN7 141 aa13.1□□□□□ -0.31
SSH3-211ENST00000534112 SMIM27A0A1W2PRY6 76 aa13.1□□□□□ -0.31
SSH3-211ENST00000534112 CAMPP49913 170 aa13.1□□□□□ -0.31
SSH3-211ENST00000534112 NUP35Q8NFH5 326 aa13.1□□□□□ -0.31
SSH3-211ENST00000534112 CDC42SE2Q9NRR3 84 aa13.1□□□□□ -0.31
SSH3-211ENST00000534112 NAT8BQ9UHF3 227 aa13.1□□□□□ -0.31
SSH3-211ENST00000534112 LOC107984640A0A0U1RRK4 108 aa13.09□□□□□ -0.31
SSH3-211ENST00000534112 TSHBP01222 138 aa13.09□□□□□ -0.31
SSH3-211ENST00000534112 MRAP2Q96G30 205 aa13.09□□□□□ -0.31
SSH3-211ENST00000534112 TMEM242Q9NWH2 141 aa13.08□□□□□ -0.32
SSH3-211ENST00000534112 IGLV4-69A0A075B6H9 119 aa13.07□□□□□ -0.32
SSH3-211ENST00000534112 F8W036 122 aa13.07□□□□□ -0.32
SSH3-211ENST00000534112 PPP1R2P9O14990 202 aa13.07□□□□□ -0.32
SSH3-211ENST00000534112 MRPL52Q86TS9 123 aaKnown RBP13.07□□□□□ -0.32
SSH3-211ENST00000534112 ZNF664Q8N3J9 261 aa13.07□□□□□ -0.32
SSH3-211ENST00000534112 ST20Q9HBF5 79 aa13.07□□□□□ -0.32
SSH3-211ENST00000534112 PSORS1C2Q9UIG4 136 aa13.07□□□□□ -0.32
SSH3-211ENST00000534112 RIGQ13278 110 aa13.06□□□□□ -0.32
SSH3-211ENST00000534112 SEC11CQ9BY50 192 aa13.06□□□□□ -0.32
SSH3-211ENST00000534112 MT-ND4LP03901 98 aa13.04□□□□□ -0.32
SSH3-211ENST00000534112 MT-ND6P03923 174 aa13.04□□□□□ -0.32
SSH3-211ENST00000534112 MALP21145 153 aa13.04□□□□□ -0.32
SSH3-211ENST00000534112 C9orf116Q5BN46 136 aaPredicted RBP13.04□□□□□ -0.32
SSH3-211ENST00000534112 ANAPC16Q96DE5 110 aa13.04□□□□□ -0.32
SSH3-211ENST00000534112 TMEM191AQ9H0A3 160 aa13.04□□□□□ -0.32
SSH3-211ENST00000534112 APOMO95445 188 aa13.03□□□□□ -0.32
SSH3-211ENST00000534112 POLR2KP53803 58 aaKnown RBP13.03□□□□□ -0.32
SSH3-211ENST00000534112 C7orf77A4D0Y5 90 aa13.02□□□□□ -0.33
SSH3-211ENST00000534112 C1orf196B1AJZ1 125 aa13.02□□□□□ -0.33
SSH3-211ENST00000534112 COX7A2LO14548 114 aa13.02□□□□□ -0.33
SSH3-211ENST00000534112 CAMK2N2Q96S95 79 aa13.02□□□□□ -0.33
SSH3-211ENST00000534112 TRBV27A0A0K0K1C4 114 aa13.01□□□□□ -0.33
SSH3-211ENST00000534112 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.01□□□□□ -0.33
SSH3-211ENST00000534112 C1orf137Q5JT78 98 aa13.01□□□□□ -0.33
SSH3-211ENST00000534112 C10orf91Q5T1B1 145 aa13.01□□□□□ -0.33
SSH3-211ENST00000534112 A0A1B0GW15 77 aa13□□□□□ -0.33
SSH3-211ENST00000534112 A0A1B0GXF2 115 aa12.99□□□□□ -0.33
SSH3-211ENST00000534112 PHF5AQ7RTV0 110 aaKnown RBP12.99□□□□□ -0.33
SSH3-211ENST00000534112 AMN1Q8IY45 258 aa12.99□□□□□ -0.33
SSH3-211ENST00000534112 C2orf48Q96LS8 159 aa12.99□□□□□ -0.33
SSH3-211ENST00000534112 CARHSP1Q9Y2V2 147 aaKnown RBP12.99□□□□□ -0.33
SSH3-211ENST00000534112 RAB4AP20338 218 aa12.98□□□□□ -0.33
SSH3-211ENST00000534112 RPL18AQ02543 176 aaKnown RBP12.98□□□□□ -0.33
SSH3-211ENST00000534112 MRPL54Q6P161 138 aaKnown RBP12.98□□□□□ -0.33
SSH3-211ENST00000534112 HBBP68871 147 aa12.97□□□□□ -0.33
SSH3-211ENST00000534112 PRR26Q8N8Z3 221 aa12.97□□□□□ -0.33
SSH3-211ENST00000534112 OPRPNQ99935 248 aaPredicted RBP12.97□□□□□ -0.33
SSH3-211ENST00000534112 CSDC2Q9Y534 153 aaKnown RBP12.97□□□□□ -0.33
SSH3-211ENST00000534112 TRAV13-1A0A0B4J241 112 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms