RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 A0A0B4J2C4 111 aa12.98□□□□□ -0.33
PHRF1-205ENST00000533464 IGKV3D-7A0A0C4DH55 119 aa12.98□□□□□ -0.33
PHRF1-205ENST00000533464 SPANXCQ9NY87 97 aa12.97□□□□□ -0.33
PHRF1-205ENST00000533464 C11orf45Q8TAV5 145 aa12.97□□□□□ -0.33
PHRF1-205ENST00000533464 PKD1L2Q7Z442 2459 aa12.97□□□□□ -0.33
PHRF1-205ENST00000533464 LINC00310P59036 64 aa12.97□□□□□ -0.33
PHRF1-205ENST00000533464 Q8N976 141 aa12.97□□□□□ -0.33
PHRF1-205ENST00000533464 WFDC10AQ9H1F0 79 aa12.97□□□□□ -0.33
PHRF1-205ENST00000533464 CRYGDP07320 174 aa12.96□□□□□ -0.33
PHRF1-205ENST00000533464 HIGD2BQ4VC39 106 aa12.96□□□□□ -0.33
PHRF1-205ENST00000533464 CNFNQ9BYD5 112 aa12.96□□□□□ -0.33
PHRF1-205ENST00000533464 TRBV6-4A0A1B0GX49 114 aa12.96□□□□□ -0.33
PHRF1-205ENST00000533464 G3V4G9 280 aa12.96□□□□□ -0.33
PHRF1-205ENST00000533464 DIRC1Q969H9 104 aa12.96□□□□□ -0.33
PHRF1-205ENST00000533464 TRBV6-8A0A0A6YYG3 113 aa12.96□□□□□ -0.34
PHRF1-205ENST00000533464 CITED1Q99966 193 aa12.96□□□□□ -0.34
PHRF1-205ENST00000533464 POLR2KP53803 58 aaKnown RBP12.96□□□□□ -0.34
PHRF1-205ENST00000533464 CHCHD10Q8WYQ3 142 aaPredicted RBP12.96□□□□□ -0.34
PHRF1-205ENST00000533464 IGHV4-28A0A0C4DH34 117 aa12.95□□□□□ -0.34
PHRF1-205ENST00000533464 TSHBP01222 138 aa12.95□□□□□ -0.34
PHRF1-205ENST00000533464 JMJD7-PLA2G4BH0Y9G9 81 aa12.95□□□□□ -0.34
PHRF1-205ENST00000533464 EML5Q05BV3 1969 aa12.95□□□□□ -0.34
PHRF1-205ENST00000533464 MTORP42345 2549 aa12.95□□□□□ -0.34
PHRF1-205ENST00000533464 C9orf85Q96MD7 179 aa12.95□□□□□ -0.34
PHRF1-205ENST00000533464 B5MCH6 92 aa12.94□□□□□ -0.34
PHRF1-205ENST00000533464 LY6G6DO95868 133 aa12.94□□□□□ -0.34
PHRF1-205ENST00000533464 KRTAP10-9P60411 292 aa12.94□□□□□ -0.34
PHRF1-205ENST00000533464 EDN2P20800 178 aa12.94□□□□□ -0.34
PHRF1-205ENST00000533464 PYGO1Q9Y3Y4 419 aa12.94□□□□□ -0.34
PHRF1-205ENST00000533464 CPAMD8Q8IZJ3 1885 aa12.94□□□□□ -0.34
PHRF1-205ENST00000533464 COL5A1P20908 1838 aaPredicted RBP12.94□□□□□ -0.34
PHRF1-205ENST00000533464 H7C423 109 aa12.94□□□□□ -0.34
PHRF1-205ENST00000533464 SPANXB1Q9NS25 103 aaPredicted RBP12.93□□□□□ -0.34
PHRF1-205ENST00000533464 A8MZ25 164 aa12.92□□□□□ -0.34
PHRF1-205ENST00000533464 C2orf91Q6ZV80 131 aa12.92□□□□□ -0.34
PHRF1-205ENST00000533464 LINC00308Q8TCZ7 52 aa12.92□□□□□ -0.34
PHRF1-205ENST00000533464 PKIGQ9Y2B9 76 aa12.92□□□□□ -0.34
PHRF1-205ENST00000533464 PIK3CD-AS1Q5SR53 167 aa12.91□□□□□ -0.34
PHRF1-205ENST00000533464 UFSP1Q6NVU6 142 aa12.91□□□□□ -0.34
PHRF1-205ENST00000533464 RBM3P98179 157 aaKnown RBP12.91□□□□□ -0.34
PHRF1-205ENST00000533464 ZNF462Q96JM2 2506 aa12.9□□□□□ -0.34
PHRF1-205ENST00000533464 FAM236AA0A1B0GUQ0 79 aa12.9□□□□□ -0.34
PHRF1-205ENST00000533464 FAM236BA0A1B0GV22 79 aa12.9□□□□□ -0.34
PHRF1-205ENST00000533464 HILS1P60008 231 aa12.9□□□□□ -0.34
PHRF1-205ENST00000533464 URB1-AS1Q96HZ7 61 aa12.9□□□□□ -0.34
PHRF1-205ENST00000533464 BBC3Q96PG8 261 aaPredicted RBP12.9□□□□□ -0.34
PHRF1-205ENST00000533464 FAM110AQ9BQ89 295 aa12.9□□□□□ -0.34
PHRF1-205ENST00000533464 TMEM256-PLSCR3K7ERE1 68 aa12.9□□□□□ -0.34
PHRF1-205ENST00000533464 MIFP14174 115 aa12.9□□□□□ -0.34
PHRF1-205ENST00000533464 NREPQ16612 68 aa12.9□□□□□ -0.34
PHRF1-205ENST00000533464 DEFB131BA0A096LNP1 70 aa12.89□□□□□ -0.35
PHRF1-205ENST00000533464 H3BQ85 93 aa12.89□□□□□ -0.35
PHRF1-205ENST00000533464 C14orf132Q9NPU4 83 aa12.88□□□□□ -0.35
PHRF1-205ENST00000533464 IBA57-AS1B1ANH7 110 aa12.88□□□□□ -0.35
PHRF1-205ENST00000533464 PRRC2CQ9Y520 2896 aaKnown RBP12.88□□□□□ -0.35
PHRF1-205ENST00000533464 CRIP2P52943 208 aaPredicted RBP12.87□□□□□ -0.35
PHRF1-205ENST00000533464 RBX1P62877 108 aa12.87□□□□□ -0.35
PHRF1-205ENST00000533464 LOC100131303A0A0U1RQF7 123 aa12.87□□□□□ -0.35
PHRF1-205ENST00000533464 A0A1B0GX51 115 aa12.87□□□□□ -0.35
PHRF1-205ENST00000533464 EXPH5Q8NEV8 1989 aa12.87□□□□□ -0.35
PHRF1-205ENST00000533464 POLQO75417 2590 aa12.87□□□□□ -0.35
PHRF1-205ENST00000533464 FASNP49327 2511 aaKnown RBP12.87□□□□□ -0.35
PHRF1-205ENST00000533464 COX7BP24311 80 aa12.86□□□□□ -0.35
PHRF1-205ENST00000533464 TEX49A0A1B0GTD5 131 aa12.86□□□□□ -0.35
PHRF1-205ENST00000533464 TRIAP1O43715 76 aa12.86□□□□□ -0.35
PHRF1-205ENST00000533464 UBE2D4Q9Y2X8 147 aa12.86□□□□□ -0.35
PHRF1-205ENST00000533464 UBE2AP49459 152 aa12.85□□□□□ -0.35
PHRF1-205ENST00000533464 ODF3L2Q3SX64 289 aa12.85□□□□□ -0.35
PHRF1-205ENST00000533464 KLK5Q9Y337 293 aaPredicted RBP12.85□□□□□ -0.35
PHRF1-205ENST00000533464 IGKV2-24A0A0C4DH68 120 aa12.84□□□□□ -0.35
PHRF1-205ENST00000533464 ATOX1O00244 68 aa12.84□□□□□ -0.35
PHRF1-205ENST00000533464 MRGPRG-AS1Q2M3A8 158 aa12.83□□□□□ -0.36
PHRF1-205ENST00000533464 XAGE1AQ9HD64 81 aa12.83□□□□□ -0.36
PHRF1-205ENST00000533464 NDUFS5O43920 106 aa12.83□□□□□ -0.36
PHRF1-205ENST00000533464 SHISA2Q6UWI4 295 aa12.83□□□□□ -0.36
PHRF1-205ENST00000533464 IGIPA6NJ69 53 aa12.82□□□□□ -0.36
PHRF1-205ENST00000533464 RAI1Q7Z5J4 1906 aaPredicted RBP12.81□□□□□ -0.36
PHRF1-205ENST00000533464 TRBV30A0A0K0K1B3 111 aa12.81□□□□□ -0.36
PHRF1-205ENST00000533464 SS18L2Q9UHA2 77 aa12.81□□□□□ -0.36
PHRF1-205ENST00000533464 SMR3AQ99954 134 aa12.81□□□□□ -0.36
PHRF1-205ENST00000533464 LINC00643Q86TS7 51 aa12.8□□□□□ -0.36
PHRF1-205ENST00000533464 COX8CQ7Z4L0 72 aa12.8□□□□□ -0.36
PHRF1-205ENST00000533464 MRPS36P82909 103 aaKnown RBP12.8□□□□□ -0.36
PHRF1-205ENST00000533464 SLPIP03973 132 aa12.79□□□□□ -0.36
PHRF1-205ENST00000533464 PLA2G2AP14555 144 aa12.79□□□□□ -0.36
PHRF1-205ENST00000533464 UBE2D1P51668 147 aa12.79□□□□□ -0.36
PHRF1-205ENST00000533464 PDE6GP18545 87 aa12.78□□□□□ -0.36
PHRF1-205ENST00000533464 SPATA25Q9BR10 227 aa12.78□□□□□ -0.36
PHRF1-205ENST00000533464 TIMM17BO60830 172 aa12.78□□□□□ -0.36
PHRF1-205ENST00000533464 BRI3O95415 125 aa12.77□□□□□ -0.36
PHRF1-205ENST00000533464 UBE2D3P61077 147 aa12.77□□□□□ -0.36
PHRF1-205ENST00000533464 UBE2D2P62837 147 aa12.77□□□□□ -0.36
PHRF1-205ENST00000533464 LINC00526Q96FQ7 95 aa12.77□□□□□ -0.36
PHRF1-205ENST00000533464 CD164L2Q6UWJ8 174 aa12.77□□□□□ -0.36
PHRF1-205ENST00000533464 LINC00959A0A1B0GUT2 108 aa12.77□□□□□ -0.37
PHRF1-205ENST00000533464 KIR2DL5BQ8NHK3 375 aa12.77□□□□□ -0.37
PHRF1-205ENST00000533464 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.76□□□□□ -0.37
PHRF1-205ENST00000533464 MT-ATP8P03928 68 aa12.76□□□□□ -0.37
PHRF1-205ENST00000533464 HIGD2AQ9BW72 106 aa12.76□□□□□ -0.37
PHRF1-205ENST00000533464 C6orf99Q4VX62 202 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms