RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 PRR15Q8IV56 129 aa4.01□□□□□ -1.77
CKAP5-212ENST00000533413 C16orf95Q9H693 158 aa4.01□□□□□ -1.77
CKAP5-212ENST00000533413 PHLDA3Q9Y5J5 127 aa4.01□□□□□ -1.77
CKAP5-212ENST00000533413 CSMD1Q96PZ7 3565 aa4□□□□□ -1.77
CKAP5-212ENST00000533413 POLQO75417 2590 aa4□□□□□ -1.77
CKAP5-212ENST00000533413 IGHV4-4A0A075B6R2 117 aa4□□□□□ -1.77
CKAP5-212ENST00000533413 IGHV7-81A0A0B4J1V7 117 aa4□□□□□ -1.77
CKAP5-212ENST00000533413 TRAV41A0A0B4J266 112 aa4□□□□□ -1.77
CKAP5-212ENST00000533413 IGHV7-4-1A0A0J9YVY3 117 aa4□□□□□ -1.77
CKAP5-212ENST00000533413 ODF3BA8MYP8 253 aa4□□□□□ -1.77
CKAP5-212ENST00000533413 PPP1R17O96001 155 aa4□□□□□ -1.77
CKAP5-212ENST00000533413 TMEM258P61165 79 aa4□□□□□ -1.77
CKAP5-212ENST00000533413 DAD1P61803 113 aa4□□□□□ -1.77
CKAP5-212ENST00000533413 HIST1H4AP62805 103 aaKnown RBP4□□□□□ -1.77
CKAP5-212ENST00000533413 MINOS1Q5TGZ0 78 aa4□□□□□ -1.77
CKAP5-212ENST00000533413 SFTA2Q6UW10 78 aa4□□□□□ -1.77
CKAP5-212ENST00000533413 LINC00337Q8N6G1 96 aa4□□□□□ -1.77
CKAP5-212ENST00000533413 TOMM6Q96B49 74 aa4□□□□□ -1.77
CKAP5-212ENST00000533413 DPH3P1Q9H4G8 78 aa4□□□□□ -1.77
CKAP5-212ENST00000533413 MINOS1-NBL1R4GNA1 71 aa4□□□□□ -1.77
CKAP5-212ENST00000533413 TRAV8-3A0A0A6YYJ7 113 aa4□□□□□ -1.77
CKAP5-212ENST00000533413 C2orf66Q6UXQ4 117 aa4□□□□□ -1.77
CKAP5-212ENST00000533413 ZFP2Q6ZN57 461 aa4□□□□□ -1.77
CKAP5-212ENST00000533413 C9orf47Q6ZRZ4 202 aa4□□□□□ -1.77
CKAP5-212ENST00000533413 C15orf53Q8NAA6 179 aa4□□□□□ -1.77
CKAP5-212ENST00000533413 TM2D3Q9BRN9 247 aa4□□□□□ -1.77
CKAP5-212ENST00000533413 MED13LQ71F56 2210 aa4□□□□□ -1.77
CKAP5-212ENST00000533413 TRAV21A0A0B4J279 112 aa3.99□□□□□ -1.77
CKAP5-212ENST00000533413 P0DMU3 169 aa3.99□□□□□ -1.77
CKAP5-212ENST00000533413 FAM231AP0DMU4 169 aa3.99□□□□□ -1.77
CKAP5-212ENST00000533413 FAM231CP0DMU5 169 aa3.99□□□□□ -1.77
CKAP5-212ENST00000533413 C14orf178Q8N769 122 aaPredicted RBP3.99□□□□□ -1.77
CKAP5-212ENST00000533413 CHCHD5Q9BSY4 110 aa3.99□□□□□ -1.77
CKAP5-212ENST00000533413 VPS13CQ709C8 3753 aa3.99□□□□□ -1.77
CKAP5-212ENST00000533413 AGRNO00468 2067 aa3.99□□□□□ -1.77
CKAP5-212ENST00000533413 A8MUN3 132 aa3.99□□□□□ -1.77
CKAP5-212ENST00000533413 FSHBP01225 129 aa3.99□□□□□ -1.77
CKAP5-212ENST00000533413 Q8N6K4 173 aa3.99□□□□□ -1.77
CKAP5-212ENST00000533413 LENEPQ9Y5L5 61 aa3.99□□□□□ -1.77
CKAP5-212ENST00000533413 FLNAP21333 2647 aaKnown RBP3.99□□□□□ -1.77
CKAP5-212ENST00000533413 HIVEP1P15822 2718 aa3.98□□□□□ -1.77
CKAP5-212ENST00000533413 TRBV7-1A0A0A6YYK4 115 aa3.98□□□□□ -1.77
CKAP5-212ENST00000533413 INAFM1C9JVW0 142 aa3.98□□□□□ -1.77
CKAP5-212ENST00000533413 H0Y9J4 135 aa3.98□□□□□ -1.77
CKAP5-212ENST00000533413 KTN1-AS1Q86SY8 53 aa3.98□□□□□ -1.77
CKAP5-212ENST00000533413 Q8N9W7 124 aa3.98□□□□□ -1.77
CKAP5-212ENST00000533413 MAPK1IP1LQ8NDC0 245 aa3.98□□□□□ -1.77
CKAP5-212ENST00000533413 SMR3AQ99954 134 aa3.98□□□□□ -1.77
CKAP5-212ENST00000533413 ZNF706Q9Y5V0 76 aaPredicted RBP3.98□□□□□ -1.77
CKAP5-212ENST00000533413 K7EQD1 137 aa3.98□□□□□ -1.77
CKAP5-212ENST00000533413 ATP6V0E1O15342 81 aa3.98□□□□□ -1.77
CKAP5-212ENST00000533413 SNRPD3P62318 126 aaKnown RBP3.98□□□□□ -1.77
CKAP5-212ENST00000533413 Q6ZSV7 163 aa3.98□□□□□ -1.77
CKAP5-212ENST00000533413 NDUFA11Q86Y39 141 aa3.98□□□□□ -1.77
CKAP5-212ENST00000533413 RPL39LQ96EH5 51 aaKnown RBP3.98□□□□□ -1.77
CKAP5-212ENST00000533413 ZNF469Q96JG9 3925 aaPredicted RBP3.98□□□□□ -1.77
CKAP5-212ENST00000533413 ANK3Q12955 4377 aaKnown RBP3.98□□□□□ -1.77
CKAP5-212ENST00000533413 CLPSL1A2RUU4 121 aa3.98□□□□□ -1.77
CKAP5-212ENST00000533413 SLC25A20O43772 301 aa3.98□□□□□ -1.77
CKAP5-212ENST00000533413 ZFP36P26651 326 aaKnown RBP3.98□□□□□ -1.77
CKAP5-212ENST00000533413 TMEM170BQ5T4T1 132 aa3.98□□□□□ -1.77
CKAP5-212ENST00000533413 KLHL30-AS1Q8NEE0 82 aa3.98□□□□□ -1.77
CKAP5-212ENST00000533413 TIMM17AQ99595 171 aa3.98□□□□□ -1.77
CKAP5-212ENST00000533413 G3V318 75 aa3.97□□□□□ -1.77
CKAP5-212ENST00000533413 TRACP01848 142 aa3.97□□□□□ -1.77
CKAP5-212ENST00000533413 COX7CP15954 63 aa3.97□□□□□ -1.77
CKAP5-212ENST00000533413 RNASE4P34096 147 aaKnown RBP3.97□□□□□ -1.77
CKAP5-212ENST00000533413 SS18Q15532 418 aa3.97□□□□□ -1.77
CKAP5-212ENST00000533413 CREBBPQ92793 2442 aa3.97□□□□□ -1.77
CKAP5-212ENST00000533413 SPG11Q96JI7 2443 aa3.97□□□□□ -1.77
CKAP5-212ENST00000533413 TRAV2A0A0B4J234 112 aa3.97□□□□□ -1.77
CKAP5-212ENST00000533413 LGALS3P17931 250 aaKnown RBP3.97□□□□□ -1.77
CKAP5-212ENST00000533413 PSMB8P28062 276 aa3.97□□□□□ -1.77
CKAP5-212ENST00000533413 CXCL5P42830 114 aa3.97□□□□□ -1.77
CKAP5-212ENST00000533413 C6orf99Q4VX62 202 aa3.97□□□□□ -1.77
CKAP5-212ENST00000533413 C5orf38Q86SI9 138 aa3.97□□□□□ -1.77
CKAP5-212ENST00000533413 C6orf223Q8N319 242 aa3.97□□□□□ -1.77
CKAP5-212ENST00000533413 NOTCH2Q04721 2471 aa3.97□□□□□ -1.77
CKAP5-212ENST00000533413 CCDC168Q8NDH2 2452 aa3.97□□□□□ -1.77
CKAP5-212ENST00000533413 AKAP6Q13023 2319 aa3.97□□□□□ -1.77
CKAP5-212ENST00000533413 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.97□□□□□ -1.777e-8■■■■■ 62.7
CKAP5-212ENST00000533413 IGHV1-69DA0A0B4J2H0 117 aa3.96□□□□□ -1.77
CKAP5-212ENST00000533413 LST1O00453 97 aa3.96□□□□□ -1.77
CKAP5-212ENST00000533413 SEC61BP60468 96 aaKnown RBP3.96□□□□□ -1.77
CKAP5-212ENST00000533413 PRR9Q5T870 116 aa3.96□□□□□ -1.77
CKAP5-212ENST00000533413 TMEM141Q96I45 108 aa3.96□□□□□ -1.77
CKAP5-212ENST00000533413 UPK3BQ9BT76 320 aa3.96□□□□□ -1.77
CKAP5-212ENST00000533413 ABCA2Q9BZC7 2435 aa3.96□□□□□ -1.77
CKAP5-212ENST00000533413 A0A0J9YY99 117 aa3.96□□□□□ -1.78
CKAP5-212ENST00000533413 C11orf86A6NJI1 115 aa3.96□□□□□ -1.78
CKAP5-212ENST00000533413 PRO1854Q9UHT4 67 aa3.96□□□□□ -1.78
CKAP5-212ENST00000533413 GNRH2O43555 120 aa3.96□□□□□ -1.78
CKAP5-212ENST00000533413 ZNF73O43830 326 aaPredicted RBP3.96□□□□□ -1.78
CKAP5-212ENST00000533413 LINC00313P59037 77 aa3.96□□□□□ -1.78
CKAP5-212ENST00000533413 Q1RN00 199 aa3.96□□□□□ -1.78
CKAP5-212ENST00000533413 ZFAND2AQ8N6M9 145 aa3.96□□□□□ -1.78
CKAP5-212ENST00000533413 MOB4Q9Y3A3 225 aa3.96□□□□□ -1.78
CKAP5-212ENST00000533413 CELSR1Q9NYQ6 3014 aa3.95□□□□□ -1.78
CKAP5-212ENST00000533413 F8P00451 2351 aa3.95□□□□□ -1.78
CKAP5-212ENST00000533413 IGKV3-7A0A075B6H7 116 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms