RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 TSKUQ8WUA8 353 aa11.26□□□□□ -0.61
PCF11-206ENST00000533018 LINC00959A0A1B0GUT2 108 aa11.25□□□□□ -0.61
PCF11-206ENST00000533018 ZNF727A8MUV8 499 aa11.25□□□□□ -0.61
PCF11-206ENST00000533018 SS18Q15532 418 aa11.25□□□□□ -0.61
PCF11-206ENST00000533018 LINC01551Q86U37 167 aa11.25□□□□□ -0.61
PCF11-206ENST00000533018 TMEM191AQ9H0A3 160 aa11.24□□□□□ -0.61
PCF11-206ENST00000533018 IGHV1-58A0A0C4DH39 117 aa11.23□□□□□ -0.61
PCF11-206ENST00000533018 ESDP10768 282 aa11.23□□□□□ -0.61
PCF11-206ENST00000533018 RAB4AP20338 218 aa11.23□□□□□ -0.61
PCF11-206ENST00000533018 AMN1Q8IY45 258 aa11.23□□□□□ -0.61
PCF11-206ENST00000533018 LINC00526Q96FQ7 95 aa11.23□□□□□ -0.61
PCF11-206ENST00000533018 A0A096LNI7 61 aa11.22□□□□□ -0.61
PCF11-206ENST00000533018 FAM210AQ96ND0 272 aa11.22□□□□□ -0.61
PCF11-206ENST00000533018 CDC42SE2Q9NRR3 84 aa11.22□□□□□ -0.61
PCF11-206ENST00000533018 C7orf77A4D0Y5 90 aa11.21□□□□□ -0.61
PCF11-206ENST00000533018 SMKR1H3BMG3 65 aa11.21□□□□□ -0.61
PCF11-206ENST00000533018 ZNF561-AS1K7EIQ3 104 aa11.21□□□□□ -0.61
PCF11-206ENST00000533018 MT1HL1P0DM35 61 aa11.21□□□□□ -0.61
PCF11-206ENST00000533018 FCER1GP30273 86 aa11.21□□□□□ -0.61
PCF11-206ENST00000533018 POLR2KP53803 58 aaKnown RBP11.21□□□□□ -0.61
PCF11-206ENST00000533018 ZNF664Q8N3J9 261 aa11.21□□□□□ -0.61
PCF11-206ENST00000533018 OSTCQ9NRP0 149 aa11.21□□□□□ -0.61
PCF11-206ENST00000533018 LINC00474Q9P2X8 69 aa11.21□□□□□ -0.61
PCF11-206ENST00000533018 PKIGQ9Y2B9 76 aa11.21□□□□□ -0.61
PCF11-206ENST00000533018 TRBV27A0A0K0K1C4 114 aa11.2□□□□□ -0.62
PCF11-206ENST00000533018 RIGQ13278 110 aa11.2□□□□□ -0.62
PCF11-206ENST00000533018 MRPL52Q86TS9 123 aaKnown RBP11.2□□□□□ -0.62
PCF11-206ENST00000533018 CARD19Q96LW7 228 aa11.2□□□□□ -0.62
PCF11-206ENST00000533018 VCYO14598 125 aa11.19□□□□□ -0.62
PCF11-206ENST00000533018 SRP19P09132 144 aaKnown RBP11.19□□□□□ -0.62
PCF11-206ENST00000533018 CD164L2Q6UWJ8 174 aa11.19□□□□□ -0.62
PCF11-206ENST00000533018 MALP21145 153 aa11.18□□□□□ -0.62
PCF11-206ENST00000533018 PRR3P79522 188 aaKnown RBP11.18□□□□□ -0.62
PCF11-206ENST00000533018 NUP35Q8NFH5 326 aa11.18□□□□□ -0.62
PCF11-206ENST00000533018 PPP1R17O96001 155 aa11.17□□□□□ -0.62
PCF11-206ENST00000533018 SYCNQ0VAF6 134 aa11.17□□□□□ -0.62
PCF11-206ENST00000533018 KIR2DL4Q99706 377 aa11.17□□□□□ -0.62
PCF11-206ENST00000533018 V9GYV3 84 aa11.17□□□□□ -0.62
PCF11-206ENST00000533018 C1orf196B1AJZ1 125 aa11.16□□□□□ -0.62
PCF11-206ENST00000533018 SMAGPQ0VAQ4 97 aa11.16□□□□□ -0.62
PCF11-206ENST00000533018 TMEM241Q24JQ0 296 aa11.16□□□□□ -0.62
PCF11-206ENST00000533018 ISOC2Q96AB3 205 aa11.16□□□□□ -0.62
PCF11-206ENST00000533018 NAT8BQ9UHF3 227 aa11.16□□□□□ -0.62
PCF11-206ENST00000533018 CAMPP49913 170 aa11.15□□□□□ -0.62
PCF11-206ENST00000533018 SUMO2P61956 95 aaKnown RBP11.15□□□□□ -0.62
PCF11-206ENST00000533018 RNASE13Q5GAN3 156 aaKnown RBP11.15□□□□□ -0.62
PCF11-206ENST00000533018 TNXBP22105 4242 aa11.14□□□□□ -0.63
PCF11-206ENST00000533018 IGLV4-69A0A075B6H9 119 aa11.14□□□□□ -0.63
PCF11-206ENST00000533018 TRAV13-1A0A0B4J241 112 aa11.14□□□□□ -0.63
PCF11-206ENST00000533018 COX7A2LO14548 114 aa11.14□□□□□ -0.63
PCF11-206ENST00000533018 ADIRFQ15847 76 aa11.14□□□□□ -0.63
PCF11-206ENST00000533018 PPP1R2P9O14990 202 aa11.13□□□□□ -0.63
PCF11-206ENST00000533018 RPL23P62829 140 aaKnown RBP11.13□□□□□ -0.63
PCF11-206ENST00000533018 GAGE2BQ13066 116 aa11.13□□□□□ -0.63
PCF11-206ENST00000533018 FAM74A3Q4VXF1 159 aa11.13□□□□□ -0.63
PCF11-206ENST00000533018 NRACQ8N912 160 aa11.13□□□□□ -0.63
PCF11-206ENST00000533018 UBE2D4Q9Y2X8 147 aa11.13□□□□□ -0.63
PCF11-206ENST00000533018 TMEM18Q96B42 140 aa11.12□□□□□ -0.63
PCF11-206ENST00000533018 CAMK2N2Q96S95 79 aa11.12□□□□□ -0.63
PCF11-206ENST00000533018 CSDC2Q9Y534 153 aaKnown RBP11.12□□□□□ -0.63
PCF11-206ENST00000533018 LOC107984640A0A0U1RRK4 108 aa11.11□□□□□ -0.63
PCF11-206ENST00000533018 PTTG1IPP53801 180 aa11.11□□□□□ -0.63
PCF11-206ENST00000533018 MRPL51Q4U2R6 128 aaKnown RBP11.11□□□□□ -0.63
PCF11-206ENST00000533018 LINC01600Q96MT4 127 aa11.11□□□□□ -0.63
PCF11-206ENST00000533018 CKS2P33552 79 aa11.1□□□□□ -0.63
PCF11-206ENST00000533018 FAM104BQ5XKR9 115 aa11.1□□□□□ -0.63
PCF11-206ENST00000533018 Q6ZRP5 223 aa11.1□□□□□ -0.63
PCF11-206ENST00000533018 C5orf38Q86SI9 138 aa11.1□□□□□ -0.63
PCF11-206ENST00000533018 NAT8Q9UHE5 227 aa11.1□□□□□ -0.63
PCF11-206ENST00000533018 APOMO95445 188 aa11.09□□□□□ -0.63
PCF11-206ENST00000533018 SPINK6Q6UWN8 80 aa11.09□□□□□ -0.63
PCF11-206ENST00000533018 Q6ZUT4 128 aa11.09□□□□□ -0.63
PCF11-206ENST00000533018 SMIM27A0A1W2PRY6 76 aa11.08□□□□□ -0.64
PCF11-206ENST00000533018 LINC00862A6NCI5 91 aa11.08□□□□□ -0.64
PCF11-206ENST00000533018 REG3GQ6UW15 175 aa11.08□□□□□ -0.64
PCF11-206ENST00000533018 A0A1B0GW15 77 aa11.07□□□□□ -0.64
PCF11-206ENST00000533018 C9JQL5 133 aa11.07□□□□□ -0.64
PCF11-206ENST00000533018 LRP2P98164 4655 aa11.07□□□□□ -0.64
PCF11-206ENST00000533018 RPL18AQ02543 176 aaKnown RBP11.07□□□□□ -0.64
PCF11-206ENST00000533018 PEA15Q15121 130 aa11.07□□□□□ -0.64
PCF11-206ENST00000533018 C20orf78Q9BR46 151 aa11.07□□□□□ -0.64
PCF11-206ENST00000533018 RPL39P62891 51 aaKnown RBP11.06□□□□□ -0.64
PCF11-206ENST00000533018 SPAG11BQ08648 103 aa11.06□□□□□ -0.64
PCF11-206ENST00000533018 TIMM21Q9BVV7 248 aa11.06□□□□□ -0.64
PCF11-206ENST00000533018 A0A0J9YXV3 536 aa11.05□□□□□ -0.64
PCF11-206ENST00000533018 TCAPO15273 167 aa11.05□□□□□ -0.64
PCF11-206ENST00000533018 TNFRSF6BO95407 300 aa11.05□□□□□ -0.64
PCF11-206ENST00000533018 SRSF3P84103 164 aaKnown RBP11.05□□□□□ -0.64
PCF11-206ENST00000533018 MRPL54Q6P161 138 aaKnown RBP11.05□□□□□ -0.64
PCF11-206ENST00000533018 C2orf48Q96LS8 159 aa11.05□□□□□ -0.64
PCF11-206ENST00000533018 OPRPNQ99935 248 aaPredicted RBP11.05□□□□□ -0.64
PCF11-206ENST00000533018 TRBV24-1A0A075B6N3 115 aa11.04□□□□□ -0.64
PCF11-206ENST00000533018 A0A1W2PNN7 141 aa11.04□□□□□ -0.64
PCF11-206ENST00000533018 D6R8Y8 96 aa11.04□□□□□ -0.64
PCF11-206ENST00000533018 F8W036 122 aa11.04□□□□□ -0.64
PCF11-206ENST00000533018 S100A8P05109 93 aa11.04□□□□□ -0.64
PCF11-206ENST00000533018 ODF1Q14990 250 aa11.04□□□□□ -0.64
PCF11-206ENST00000533018 RNF213Q63HN8 5207 aa11.03□□□□□ -0.64
PCF11-206ENST00000533018 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.03□□□□□ -0.64
PCF11-206ENST00000533018 HBBP68871 147 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms