RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 LINC00959A0A1B0GUT2 108 aa10.61□□□□□ -0.71
CPSF1-207ENST00000531727 PHOX2AO14813 284 aa10.61□□□□□ -0.71
CPSF1-207ENST00000531727 CCL25O15444 150 aa10.61□□□□□ -0.71
CPSF1-207ENST00000531727 XCL1P47992 114 aa10.61□□□□□ -0.71
CPSF1-207ENST00000531727 MRAP2Q96G30 205 aa10.61□□□□□ -0.71
CPSF1-207ENST00000531727 RAB4AP20338 218 aa10.6□□□□□ -0.71
CPSF1-207ENST00000531727 POLR2KP53803 58 aaKnown RBP10.6□□□□□ -0.71
CPSF1-207ENST00000531727 MRPL52Q86TS9 123 aaKnown RBP10.6□□□□□ -0.71
CPSF1-207ENST00000531727 OSTCQ9NRP0 149 aa10.6□□□□□ -0.71
CPSF1-207ENST00000531727 IGHV1-58A0A0C4DH39 117 aa10.59□□□□□ -0.71
CPSF1-207ENST00000531727 TRBV27A0A0K0K1C4 114 aa10.59□□□□□ -0.71
CPSF1-207ENST00000531727 ZNF727A8MUV8 499 aa10.59□□□□□ -0.71
CPSF1-207ENST00000531727 STPG4Q8N801 248 aa10.59□□□□□ -0.71
CPSF1-207ENST00000531727 A0A096LNI7 61 aa10.58□□□□□ -0.72
CPSF1-207ENST00000531727 SS18Q15532 418 aa10.58□□□□□ -0.72
CPSF1-207ENST00000531727 AMN1Q8IY45 258 aa10.58□□□□□ -0.72
CPSF1-207ENST00000531727 CDC42SE2Q9NRR3 84 aa10.58□□□□□ -0.72
CPSF1-207ENST00000531727 C7orf77A4D0Y5 90 aa10.57□□□□□ -0.72
CPSF1-207ENST00000531727 SRP19P09132 144 aaKnown RBP10.57□□□□□ -0.72
CPSF1-207ENST00000531727 PKIGQ9Y2B9 76 aa10.57□□□□□ -0.72
CPSF1-207ENST00000531727 RIGQ13278 110 aa10.56□□□□□ -0.72
CPSF1-207ENST00000531727 CD164L2Q6UWJ8 174 aa10.56□□□□□ -0.72
CPSF1-207ENST00000531727 ZNF664Q8N3J9 261 aa10.56□□□□□ -0.72
CPSF1-207ENST00000531727 CARD19Q96LW7 228 aa10.56□□□□□ -0.72
CPSF1-207ENST00000531727 LINC00474Q9P2X8 69 aa10.56□□□□□ -0.72
CPSF1-207ENST00000531727 V9GYV3 84 aa10.56□□□□□ -0.72
CPSF1-207ENST00000531727 PRR3P79522 188 aaKnown RBP10.55□□□□□ -0.72
CPSF1-207ENST00000531727 NUP35Q8NFH5 326 aa10.55□□□□□ -0.72
CPSF1-207ENST00000531727 LINC00526Q96FQ7 95 aa10.55□□□□□ -0.72
CPSF1-207ENST00000531727 SMKR1H3BMG3 65 aa10.54□□□□□ -0.72
CPSF1-207ENST00000531727 VCYO14598 125 aa10.54□□□□□ -0.72
CPSF1-207ENST00000531727 PPP1R17O96001 155 aa10.54□□□□□ -0.72
CPSF1-207ENST00000531727 NRACQ8N912 160 aa10.54□□□□□ -0.72
CPSF1-207ENST00000531727 ZNF561-AS1K7EIQ3 104 aa10.53□□□□□ -0.72
CPSF1-207ENST00000531727 FCER1GP30273 86 aa10.53□□□□□ -0.72
CPSF1-207ENST00000531727 SUMO2P61956 95 aaKnown RBP10.53□□□□□ -0.72
CPSF1-207ENST00000531727 ISOC2Q96AB3 205 aa10.53□□□□□ -0.72
CPSF1-207ENST00000531727 SYCNQ0VAF6 134 aa10.52□□□□□ -0.73
CPSF1-207ENST00000531727 CSDC2Q9Y534 153 aaKnown RBP10.52□□□□□ -0.73
CPSF1-207ENST00000531727 TNXBP22105 4242 aa10.52□□□□□ -0.73
CPSF1-207ENST00000531727 UBR4Q5T4S7 5183 aa10.52□□□□□ -0.73
CPSF1-207ENST00000531727 C1orf196B1AJZ1 125 aa10.51□□□□□ -0.73
CPSF1-207ENST00000531727 CAMPP49913 170 aa10.51□□□□□ -0.73
CPSF1-207ENST00000531727 SMAGPQ0VAQ4 97 aa10.51□□□□□ -0.73
CPSF1-207ENST00000531727 TMEM241Q24JQ0 296 aa10.51□□□□□ -0.73
CPSF1-207ENST00000531727 FAM74A3Q4VXF1 159 aa10.51□□□□□ -0.73
CPSF1-207ENST00000531727 KIR2DL4Q99706 377 aa10.51□□□□□ -0.73
CPSF1-207ENST00000531727 NAT8BQ9UHF3 227 aa10.51□□□□□ -0.73
CPSF1-207ENST00000531727 UBE2D4Q9Y2X8 147 aa10.51□□□□□ -0.73
CPSF1-207ENST00000531727 PPP1R2P9O14990 202 aa10.5□□□□□ -0.73
CPSF1-207ENST00000531727 MALP21145 153 aa10.5□□□□□ -0.73
CPSF1-207ENST00000531727 RPL23P62829 140 aaKnown RBP10.5□□□□□ -0.73
CPSF1-207ENST00000531727 IGLV4-69A0A075B6H9 119 aa10.49□□□□□ -0.73
CPSF1-207ENST00000531727 COX7A2LO14548 114 aa10.49□□□□□ -0.73
CPSF1-207ENST00000531727 MRPL51Q4U2R6 128 aaKnown RBP10.49□□□□□ -0.73
CPSF1-207ENST00000531727 RNASE13Q5GAN3 156 aaKnown RBP10.49□□□□□ -0.73
CPSF1-207ENST00000531727 FAM104BQ5XKR9 115 aa10.49□□□□□ -0.73
CPSF1-207ENST00000531727 LINC01600Q96MT4 127 aa10.49□□□□□ -0.73
CPSF1-207ENST00000531727 ADIRFQ15847 76 aa10.48□□□□□ -0.73
CPSF1-207ENST00000531727 NAT8Q9UHE5 227 aa10.48□□□□□ -0.73
CPSF1-207ENST00000531727 LOC107984640A0A0U1RRK4 108 aa10.47□□□□□ -0.73
CPSF1-207ENST00000531727 SMIM27A0A1W2PRY6 76 aa10.47□□□□□ -0.73
CPSF1-207ENST00000531727 LINC00862A6NCI5 91 aa10.47□□□□□ -0.73
CPSF1-207ENST00000531727 PTTG1IPP53801 180 aa10.47□□□□□ -0.73
CPSF1-207ENST00000531727 Q6ZUT4 128 aa10.47□□□□□ -0.73
CPSF1-207ENST00000531727 TMEM18Q96B42 140 aa10.47□□□□□ -0.73
CPSF1-207ENST00000531727 C20orf78Q9BR46 151 aa10.47□□□□□ -0.73
CPSF1-207ENST00000531727 TIMM21Q9BVV7 248 aa10.47□□□□□ -0.73
CPSF1-207ENST00000531727 TRAV13-1A0A0B4J241 112 aa10.46□□□□□ -0.73
CPSF1-207ENST00000531727 C9JQL5 133 aa10.46□□□□□ -0.73
CPSF1-207ENST00000531727 SPINK6Q6UWN8 80 aa10.46□□□□□ -0.73
CPSF1-207ENST00000531727 TRBV24-1A0A075B6N3 115 aa10.45□□□□□ -0.74
CPSF1-207ENST00000531727 A0A1B0GW15 77 aa10.45□□□□□ -0.74
CPSF1-207ENST00000531727 RPL32P62910 135 aaKnown RBP10.45□□□□□ -0.74
CPSF1-207ENST00000531727 GAGE2BQ13066 116 aa10.45□□□□□ -0.74
CPSF1-207ENST00000531727 Q6ZRP5 223 aa10.45□□□□□ -0.74
CPSF1-207ENST00000531727 C2orf48Q96LS8 159 aa10.45□□□□□ -0.74
CPSF1-207ENST00000531727 CAMK2N2Q96S95 79 aa10.45□□□□□ -0.74
CPSF1-207ENST00000531727 TCAPO15273 167 aa10.44□□□□□ -0.74
CPSF1-207ENST00000531727 CKS2P33552 79 aa10.44□□□□□ -0.74
CPSF1-207ENST00000531727 C5orf38Q86SI9 138 aa10.44□□□□□ -0.74
CPSF1-207ENST00000531727 APOMO95445 188 aa10.43□□□□□ -0.74
CPSF1-207ENST00000531727 SRSF3P84103 164 aaKnown RBP10.43□□□□□ -0.74
CPSF1-207ENST00000531727 SRSF9Q13242 221 aaKnown RBP eCLIP10.43□□□□□ -0.74
CPSF1-207ENST00000531727 REG3GQ6UW15 175 aa10.43□□□□□ -0.74
CPSF1-207ENST00000531727 A0A0J9YXV3 536 aa10.42□□□□□ -0.74
CPSF1-207ENST00000531727 TNFRSF6BO95407 300 aa10.42□□□□□ -0.74
CPSF1-207ENST00000531727 RPL39P62891 51 aaKnown RBP10.42□□□□□ -0.74
CPSF1-207ENST00000531727 PEA15Q15121 130 aa10.42□□□□□ -0.74
CPSF1-207ENST00000531727 SMIM2Q9BVW6 85 aa10.42□□□□□ -0.74
CPSF1-207ENST00000531727 A0A1W2PNN7 141 aa10.41□□□□□ -0.74
CPSF1-207ENST00000531727 F8W036 122 aa10.41□□□□□ -0.74
CPSF1-207ENST00000531727 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.41□□□□□ -0.74
CPSF1-207ENST00000531727 S100A8P05109 93 aa10.41□□□□□ -0.74
CPSF1-207ENST00000531727 SPAG11BQ08648 103 aa10.41□□□□□ -0.74
CPSF1-207ENST00000531727 SMDT1Q9H4I9 107 aa10.41□□□□□ -0.74
CPSF1-207ENST00000531727 D6R8Y8 96 aa10.4□□□□□ -0.74
CPSF1-207ENST00000531727 KRTAP10-8P60410 259 aa10.4□□□□□ -0.74
CPSF1-207ENST00000531727 HBBP68871 147 aa10.4□□□□□ -0.74
CPSF1-207ENST00000531727 MRPL54Q6P161 138 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms