RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 TRAV8-3A0A0A6YYJ7 113 aa12.34□□□□□ -0.43
BRCA2-204ENST00000530893 Q6ZTI0 123 aa12.34□□□□□ -0.43
BRCA2-204ENST00000530893 NDUFA12Q9UI09 145 aa12.34□□□□□ -0.43
BRCA2-204ENST00000530893 ETDBQ3ZM63 59 aa12.33□□□□□ -0.43
BRCA2-204ENST00000530893 SPANXDQ9BXN6 97 aa12.33□□□□□ -0.43
BRCA2-204ENST00000530893 SPANXCQ9NY87 97 aa12.33□□□□□ -0.43
BRCA2-204ENST00000530893 HELZ2Q9BYK8 2649 aaKnown RBP12.33□□□□□ -0.44
BRCA2-204ENST00000530893 CCDC168Q8NDH2 2452 aa12.33□□□□□ -0.44
BRCA2-204ENST00000530893 PDZD2O15018 2839 aa12.33□□□□□ -0.44
BRCA2-204ENST00000530893 GIG44P09565 113 aaPredicted RBP12.33□□□□□ -0.44
BRCA2-204ENST00000530893 PSMB2P49721 201 aa12.33□□□□□ -0.44
BRCA2-204ENST00000530893 ZFAND6Q6FIF0 208 aa12.33□□□□□ -0.44
BRCA2-204ENST00000530893 FAM19A3Q7Z5A8 133 aa12.33□□□□□ -0.44
BRCA2-204ENST00000530893 LITAFQ99732 161 aa12.33□□□□□ -0.44
BRCA2-204ENST00000530893 WNK1Q9H4A3 2382 aa12.32□□□□□ -0.44
BRCA2-204ENST00000530893 ATP6V0E2Q8NHE4 81 aa12.32□□□□□ -0.44
BRCA2-204ENST00000530893 C19orf73Q9NVV2 129 aa12.32□□□□□ -0.44
BRCA2-204ENST00000530893 HERVK_113P63121 156 aa12.32□□□□□ -0.44
BRCA2-204ENST00000530893 FASNP49327 2511 aaKnown RBP12.31□□□□□ -0.44
BRCA2-204ENST00000530893 TIMM17BO60830 172 aa12.31□□□□□ -0.44
BRCA2-204ENST00000530893 IGHV3-33P01772 117 aa12.31□□□□□ -0.44
BRCA2-204ENST00000530893 NOP10Q9NPE3 64 aaKnown RBP12.31□□□□□ -0.44
BRCA2-204ENST00000530893 ERG28Q9UKR5 140 aa12.31□□□□□ -0.44
BRCA2-204ENST00000530893 NF1P21359 2839 aa12.31□□□□□ -0.44
BRCA2-204ENST00000530893 ADARB2-AS1A8MUL3 147 aa12.3□□□□□ -0.44
BRCA2-204ENST00000530893 SPINK8P0C7L1 97 aa12.3□□□□□ -0.44
BRCA2-204ENST00000530893 SH2D6Q7Z4S9 175 aa12.3□□□□□ -0.44
BRCA2-204ENST00000530893 RNF183Q96D59 192 aa12.3□□□□□ -0.44
BRCA2-204ENST00000530893 OVOL2Q9BRP0 275 aa12.3□□□□□ -0.44
BRCA2-204ENST00000530893 GTSF1LQ9H1H1 148 aa12.3□□□□□ -0.44
BRCA2-204ENST00000530893 CDKN2A-AS1Q9UH64 79 aa12.3□□□□□ -0.44
BRCA2-204ENST00000530893 PLAC8L1A1L4L8 177 aa12.29□□□□□ -0.44
BRCA2-204ENST00000530893 TCL1BO95988 128 aa12.29□□□□□ -0.44
BRCA2-204ENST00000530893 MIAQ16674 131 aa12.29□□□□□ -0.44
BRCA2-204ENST00000530893 C21orf62-AS1Q17RA5 79 aa12.29□□□□□ -0.44
BRCA2-204ENST00000530893 SFTA2Q6UW10 78 aa12.29□□□□□ -0.44
BRCA2-204ENST00000530893 CSNK1G2-AS1Q8NCQ2 148 aa12.29□□□□□ -0.44
BRCA2-204ENST00000530893 ANK3Q12955 4377 aaKnown RBP12.29□□□□□ -0.44
BRCA2-204ENST00000530893 SCGB1C2P0DMR2 95 aa12.28□□□□□ -0.44
BRCA2-204ENST00000530893 SBSPONQ8IVN8 264 aa12.28□□□□□ -0.44
BRCA2-204ENST00000530893 TRBV6-4A0A1B0GX49 114 aa12.28□□□□□ -0.44
BRCA2-204ENST00000530893 EIF4EBP3O60516 100 aaPredicted RBP12.28□□□□□ -0.44
BRCA2-204ENST00000530893 NTM-AS1Q6ZSK4 140 aa12.28□□□□□ -0.44
BRCA2-204ENST00000530893 MTURNQ8N3F0 131 aa12.28□□□□□ -0.44
BRCA2-204ENST00000530893 CUBNO60494 3623 aa12.27□□□□□ -0.44
BRCA2-204ENST00000530893 NDUFA1O15239 70 aa12.27□□□□□ -0.44
BRCA2-204ENST00000530893 SMCPP49901 116 aaPredicted RBP12.27□□□□□ -0.44
BRCA2-204ENST00000530893 H7C423 109 aa12.27□□□□□ -0.45
BRCA2-204ENST00000530893 LINC00694P0DN24 101 aa12.27□□□□□ -0.45
BRCA2-204ENST00000530893 IFITM1P13164 125 aa12.27□□□□□ -0.45
BRCA2-204ENST00000530893 LINC00242Q5T6M2 205 aa12.27□□□□□ -0.45
BRCA2-204ENST00000530893 TMEM101Q96IK0 257 aa12.27□□□□□ -0.45
BRCA2-204ENST00000530893 TRGV2A0A075B6R0 118 aa12.26□□□□□ -0.45
BRCA2-204ENST00000530893 IGLV5-39A0A0G2JS06 123 aa12.26□□□□□ -0.45
BRCA2-204ENST00000530893 GAGE12JA6NER3 117 aa12.26□□□□□ -0.45
BRCA2-204ENST00000530893 PRSS2P07478 247 aa12.26□□□□□ -0.45
BRCA2-204ENST00000530893 GAGE4Q13068 117 aa12.26□□□□□ -0.45
BRCA2-204ENST00000530893 GAGE5Q13069 117 aa12.26□□□□□ -0.45
BRCA2-204ENST00000530893 RPL35AP18077 110 aaKnown RBP12.25□□□□□ -0.45
BRCA2-204ENST00000530893 ADAMTSL4-AS1Q5T5F5 129 aa12.25□□□□□ -0.45
BRCA2-204ENST00000530893 WFDC10AQ9H1F0 79 aa12.25□□□□□ -0.45
BRCA2-204ENST00000530893 CDC42SE2Q9NRR3 84 aa12.25□□□□□ -0.45
BRCA2-204ENST00000530893 TRBV30A0A0K0K1B3 111 aa12.24□□□□□ -0.45
BRCA2-204ENST00000530893 A8MZ25 164 aa12.24□□□□□ -0.45
BRCA2-204ENST00000530893 M0QXV9 152 aa12.24□□□□□ -0.45
BRCA2-204ENST00000530893 FOXI1Q12951 378 aa12.24□□□□□ -0.45
BRCA2-204ENST00000530893 CIRBPQ14011 172 aaKnown RBP12.24□□□□□ -0.45
BRCA2-204ENST00000530893 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.24□□□□□ -0.45
BRCA2-204ENST00000530893 GAGE7O76087 117 aa12.23□□□□□ -0.45
BRCA2-204ENST00000530893 GAGE12FP0CL80 117 aa12.23□□□□□ -0.45
BRCA2-204ENST00000530893 GAGE12GP0CL81 117 aa12.23□□□□□ -0.45
BRCA2-204ENST00000530893 GAGE12IP0CL82 117 aa12.23□□□□□ -0.45
BRCA2-204ENST00000530893 COX6A2Q02221 97 aa12.23□□□□□ -0.45
BRCA2-204ENST00000530893 TMEM243Q9BU79 118 aa12.23□□□□□ -0.45
BRCA2-204ENST00000530893 UBE2L6O14933 153 aa12.23□□□□□ -0.45
BRCA2-204ENST00000530893 SPATA25Q9BR10 227 aa12.23□□□□□ -0.45
BRCA2-204ENST00000530893 Q1RN00 199 aa12.22□□□□□ -0.45
BRCA2-204ENST00000530893 TEN1Q86WV5 123 aa12.22□□□□□ -0.45
BRCA2-204ENST00000530893 GAGE12HA6NDE8 117 aa12.21□□□□□ -0.45
BRCA2-204ENST00000530893 ACANP16112 2415 aa12.21□□□□□ -0.46
BRCA2-204ENST00000530893 TRGV4A0A0C4DH28 118 aa12.21□□□□□ -0.46
BRCA2-204ENST00000530893 SMIM1B2RUZ4 78 aa12.2□□□□□ -0.46
BRCA2-204ENST00000530893 COPS9Q8WXC6 57 aa12.2□□□□□ -0.46
BRCA2-204ENST00000530893 SETXQ7Z333 2677 aaKnown RBP12.2□□□□□ -0.46
BRCA2-204ENST00000530893 H7C2G1 150 aa12.2□□□□□ -0.46
BRCA2-204ENST00000530893 ATXN8Q156A1 80 aa12.2□□□□□ -0.46
BRCA2-204ENST00000530893 PPDPFLQ8WWR9 84 aa12.2□□□□□ -0.46
BRCA2-204ENST00000530893 SIGMAR1Q99720 223 aa12.2□□□□□ -0.46
BRCA2-204ENST00000530893 TRAV13-1A0A0B4J241 112 aa12.19□□□□□ -0.46
BRCA2-204ENST00000530893 PF4P02776 101 aa12.19□□□□□ -0.46
BRCA2-204ENST00000530893 ITPR2Q14571 2701 aa12.18□□□□□ -0.46
BRCA2-204ENST00000530893 INSL3P51460 131 aa12.18□□□□□ -0.46
BRCA2-204ENST00000530893 LINC00482Q8N8I6 264 aa12.18□□□□□ -0.46
BRCA2-204ENST00000530893 Q9H8V8 135 aa12.18□□□□□ -0.46
BRCA2-204ENST00000530893 FHL2Q14192 279 aa12.18□□□□□ -0.46
BRCA2-204ENST00000530893 MTORP42345 2549 aa12.17□□□□□ -0.46
BRCA2-204ENST00000530893 F5H768 121 aa12.17□□□□□ -0.46
BRCA2-204ENST00000530893 SLC25A20O43772 301 aa12.17□□□□□ -0.46
BRCA2-204ENST00000530893 COX6CP09669 75 aa12.17□□□□□ -0.46
BRCA2-204ENST00000530893 HERV-K104P63124 156 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms