RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 TRBV6-5A0A0K0K1A5 114 aa7.18□□□□□ -1.26
SF3B2-208ENST00000529994 MRPL54Q6P161 138 aaKnown RBP7.18□□□□□ -1.26
SF3B2-208ENST00000529994 TMEM101Q96IK0 257 aa7.18□□□□□ -1.26
SF3B2-208ENST00000529994 AP5S1Q9NUS5 200 aa7.18□□□□□ -1.26
SF3B2-208ENST00000529994 A0A087WYN8 130 aa7.17□□□□□ -1.26
SF3B2-208ENST00000529994 FCER1GP30273 86 aa7.17□□□□□ -1.26
SF3B2-208ENST00000529994 HIGD2BQ4VC39 106 aa7.17□□□□□ -1.26
SF3B2-208ENST00000529994 OR5A1Q8NGJ0 315 aa7.17□□□□□ -1.26
SF3B2-208ENST00000529994 CHCHD10Q8WYQ3 142 aaPredicted RBP7.17□□□□□ -1.26
SF3B2-208ENST00000529994 SMIM27A0A1W2PRY6 76 aa7.16□□□□□ -1.26
SF3B2-208ENST00000529994 C7orf77A4D0Y5 90 aa7.16□□□□□ -1.26
SF3B2-208ENST00000529994 PHOX2AO14813 284 aa7.16□□□□□ -1.26
SF3B2-208ENST00000529994 CIRBPQ14011 172 aaKnown RBP7.16□□□□□ -1.26
SF3B2-208ENST00000529994 MRPL51Q4U2R6 128 aaKnown RBP7.16□□□□□ -1.26
SF3B2-208ENST00000529994 CLRN3Q8NCR9 226 aa7.16□□□□□ -1.26
SF3B2-208ENST00000529994 LINC01600Q96MT4 127 aa7.16□□□□□ -1.26
SF3B2-208ENST00000529994 H7C423 109 aa7.15□□□□□ -1.26
SF3B2-208ENST00000529994 ZNF25P17030 456 aaPredicted RBP7.15□□□□□ -1.26
SF3B2-208ENST00000529994 XCL1P47992 114 aa7.15□□□□□ -1.26
SF3B2-208ENST00000529994 POLR2KP53803 58 aaKnown RBP7.15□□□□□ -1.26
SF3B2-208ENST00000529994 RAB14P61106 215 aa7.15□□□□□ -1.26
SF3B2-208ENST00000529994 FAM104BQ5XKR9 115 aa7.15□□□□□ -1.26
SF3B2-208ENST00000529994 NRACQ8N912 160 aa7.15□□□□□ -1.26
SF3B2-208ENST00000529994 SMDT1Q9H4I9 107 aa7.15□□□□□ -1.26
SF3B2-208ENST00000529994 TRBV27A0A0K0K1C4 114 aa7.14□□□□□ -1.27
SF3B2-208ENST00000529994 VCYO14598 125 aa7.14□□□□□ -1.27
SF3B2-208ENST00000529994 ESDP10768 282 aa7.14□□□□□ -1.27
SF3B2-208ENST00000529994 CKS2P33552 79 aa7.14□□□□□ -1.27
SF3B2-208ENST00000529994 SUMO2P61956 95 aaKnown RBP7.14□□□□□ -1.27
SF3B2-208ENST00000529994 RNASE13Q5GAN3 156 aaKnown RBP7.14□□□□□ -1.27
SF3B2-208ENST00000529994 C15orf56Q8N910 161 aa7.14□□□□□ -1.27
SF3B2-208ENST00000529994 IGHV3-64A0A075B6Q5 118 aa7.13□□□□□ -1.27
SF3B2-208ENST00000529994 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.13□□□□□ -1.27
SF3B2-208ENST00000529994 CCL25O15444 150 aa7.13□□□□□ -1.27
SF3B2-208ENST00000529994 PPP1R17O96001 155 aa7.13□□□□□ -1.27
SF3B2-208ENST00000529994 HBBP68871 147 aa7.13□□□□□ -1.27
SF3B2-208ENST00000529994 CFAP161Q6P656 301 aa7.13□□□□□ -1.27
SF3B2-208ENST00000529994 SPACA4Q8TDM5 124 aa7.13□□□□□ -1.27
SF3B2-208ENST00000529994 KIR2DL4Q99706 377 aa7.13□□□□□ -1.27
SF3B2-208ENST00000529994 LINC00959A0A1B0GUT2 108 aa7.12□□□□□ -1.27
SF3B2-208ENST00000529994 A0A1B0GW15 77 aa7.12□□□□□ -1.27
SF3B2-208ENST00000529994 D6R8Y8 96 aa7.12□□□□□ -1.27
SF3B2-208ENST00000529994 PPP1R2P9O14990 202 aa7.12□□□□□ -1.27
SF3B2-208ENST00000529994 SLPIP03973 132 aa7.12□□□□□ -1.27
SF3B2-208ENST00000529994 S100A8P05109 93 aa7.12□□□□□ -1.27
SF3B2-208ENST00000529994 CNBPP62633 177 aaKnown RBP7.12□□□□□ -1.27
SF3B2-208ENST00000529994 FOXI1Q12951 378 aa7.12□□□□□ -1.27
SF3B2-208ENST00000529994 SS18Q15532 418 aa7.12□□□□□ -1.27
SF3B2-208ENST00000529994 C7orf33Q8WU49 177 aa7.12□□□□□ -1.27
SF3B2-208ENST00000529994 LPAP08519 4548 aa7.12□□□□□ -1.27
SF3B2-208ENST00000529994 A0A0J9YXV3 536 aa7.11□□□□□ -1.27
SF3B2-208ENST00000529994 F8W036 122 aa7.11□□□□□ -1.27
SF3B2-208ENST00000529994 TNFRSF6BO95407 300 aa7.11□□□□□ -1.27
SF3B2-208ENST00000529994 ZNF664Q8N3J9 261 aa7.11□□□□□ -1.27
SF3B2-208ENST00000529994 LINC00526Q96FQ7 95 aa7.11□□□□□ -1.27
SF3B2-208ENST00000529994 CDC42SE2Q9NRR3 84 aa7.11□□□□□ -1.27
SF3B2-208ENST00000529994 PLAC8Q9NZF1 115 aa7.11□□□□□ -1.27
SF3B2-208ENST00000529994 TRAV13-1A0A0B4J241 112 aa7.1□□□□□ -1.27
SF3B2-208ENST00000529994 A0A1B0GXF2 115 aa7.1□□□□□ -1.27
SF3B2-208ENST00000529994 NPYP01303 97 aa7.1□□□□□ -1.27
SF3B2-208ENST00000529994 KRTAP10-8P60410 259 aa7.1□□□□□ -1.27
SF3B2-208ENST00000529994 PRR3P79522 188 aaKnown RBP7.1□□□□□ -1.27
SF3B2-208ENST00000529994 Q6ZUT4 128 aa7.1□□□□□ -1.27
SF3B2-208ENST00000529994 MRPL52Q86TS9 123 aaKnown RBP7.1□□□□□ -1.27
SF3B2-208ENST00000529994 UBE2D4Q9Y2X8 147 aa7.1□□□□□ -1.27
SF3B2-208ENST00000529994 IGKV2-24A0A0C4DH68 120 aa7.09□□□□□ -1.27
SF3B2-208ENST00000529994 LINC00862A6NCI5 91 aa7.09□□□□□ -1.27
SF3B2-208ENST00000529994 TCAPO15273 167 aa7.09□□□□□ -1.27
SF3B2-208ENST00000529994 RPL39P62891 51 aaKnown RBP7.09□□□□□ -1.27
SF3B2-208ENST00000529994 SMAGPQ0VAQ4 97 aa7.09□□□□□ -1.27
SF3B2-208ENST00000529994 TMEM18Q96B42 140 aa7.09□□□□□ -1.27
SF3B2-208ENST00000529994 C20orf78Q9BR46 151 aa7.09□□□□□ -1.27
SF3B2-208ENST00000529994 SMIM2Q9BVW6 85 aa7.09□□□□□ -1.27
SF3B2-208ENST00000529994 GVQW2A0A096LPI5 108 aaPredicted RBP7.08□□□□□ -1.28
SF3B2-208ENST00000529994 IGHV1-58A0A0C4DH39 117 aa7.08□□□□□ -1.28
SF3B2-208ENST00000529994 MT-ND4LP03901 98 aa7.08□□□□□ -1.28
SF3B2-208ENST00000529994 MALP21145 153 aa7.08□□□□□ -1.28
SF3B2-208ENST00000529994 COX6A2Q02221 97 aa7.08□□□□□ -1.28
SF3B2-208ENST00000529994 MAJINQ3KP22 176 aa7.08□□□□□ -1.28
SF3B2-208ENST00000529994 LOC389332A0A1B0GUA5 103 aa7.07□□□□□ -1.28
SF3B2-208ENST00000529994 PNRC1Q12796 327 aaPredicted RBP7.07□□□□□ -1.28
SF3B2-208ENST00000529994 CLLU1Q5K131 121 aa7.07□□□□□ -1.28
SF3B2-208ENST00000529994 CD164L2Q6UWJ8 174 aa7.07□□□□□ -1.28
SF3B2-208ENST00000529994 TMEM136Q6ZRR5 245 aa7.07□□□□□ -1.28
SF3B2-208ENST00000529994 ATP5L2Q7Z4Y8 100 aa7.07□□□□□ -1.28
SF3B2-208ENST00000529994 ORMDL3Q8N138 153 aa7.07□□□□□ -1.28
SF3B2-208ENST00000529994 PRSS3P2Q8NHM4 247 aa7.07□□□□□ -1.28
SF3B2-208ENST00000529994 PRELID3AQ96N28 172 aa7.07□□□□□ -1.28
SF3B2-208ENST00000529994 TRBV24-1A0A075B6N3 115 aa7.06□□□□□ -1.28
SF3B2-208ENST00000529994 ZNF561-AS1K7EIQ3 104 aa7.06□□□□□ -1.28
SF3B2-208ENST00000529994 COX7A2LO14548 114 aa7.06□□□□□ -1.28
SF3B2-208ENST00000529994 REG3GQ6UW15 175 aa7.06□□□□□ -1.28
SF3B2-208ENST00000529994 C5orf38Q86SI9 138 aa7.06□□□□□ -1.28
SF3B2-208ENST00000529994 STPG4Q8N801 248 aa7.06□□□□□ -1.28
SF3B2-208ENST00000529994 ANAPC16Q96DE5 110 aa7.06□□□□□ -1.28
SF3B2-208ENST00000529994 CARD19Q96LW7 228 aa7.06□□□□□ -1.28
SF3B2-208ENST00000529994 OPRPNQ99935 248 aaPredicted RBP7.06□□□□□ -1.28
SF3B2-208ENST00000529994 C1orf196B1AJZ1 125 aa7.05□□□□□ -1.28
SF3B2-208ENST00000529994 PPBPP02775 128 aa7.05□□□□□ -1.28
SF3B2-208ENST00000529994 RAB5AP20339 215 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms