RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 BAGE2Q86Y30 109 aa4.51□□□□□ -1.69
ATPAF1-209ENST00000529214 FAM19A4Q96LR4 140 aa4.51□□□□□ -1.69
ATPAF1-209ENST00000529214 AGPAT4-IT1Q9H0P7 198 aa4.51□□□□□ -1.69
ATPAF1-209ENST00000529214 Q9H3A6 140 aa4.51□□□□□ -1.69
ATPAF1-209ENST00000529214 KLK5Q9Y337 293 aaPredicted RBP4.51□□□□□ -1.69
ATPAF1-209ENST00000529214 DNAH7Q8WXX0 4024 aa4.5□□□□□ -1.69
ATPAF1-209ENST00000529214 IGHV4-28A0A0C4DH34 117 aa4.5□□□□□ -1.69
ATPAF1-209ENST00000529214 A0A0J9YWU9 116 aa4.5□□□□□ -1.69
ATPAF1-209ENST00000529214 CTXND1A0A1B0GTU2 59 aa4.5□□□□□ -1.69
ATPAF1-209ENST00000529214 A8MWL6 223 aa4.5□□□□□ -1.69
ATPAF1-209ENST00000529214 C3orf79P0CE67 100 aa4.5□□□□□ -1.69
ATPAF1-209ENST00000529214 SMIM13P0DJ93 91 aa4.5□□□□□ -1.69
ATPAF1-209ENST00000529214 MIFP14174 115 aa4.5□□□□□ -1.69
ATPAF1-209ENST00000529214 GCHFRP30047 84 aa4.5□□□□□ -1.69
ATPAF1-209ENST00000529214 ERCC8Q13216 396 aa4.5□□□□□ -1.69
ATPAF1-209ENST00000529214 SPINK13Q1W4C9 94 aa4.5□□□□□ -1.69
ATPAF1-209ENST00000529214 C9orf47Q6ZRZ4 202 aa4.5□□□□□ -1.69
ATPAF1-209ENST00000529214 PRR15Q8IV56 129 aa4.5□□□□□ -1.69
ATPAF1-209ENST00000529214 MSRB1Q9NZV6 116 aa4.5□□□□□ -1.69
ATPAF1-209ENST00000529214 PRO0461Q9UI25 63 aa4.5□□□□□ -1.69
ATPAF1-209ENST00000529214 TENM3Q9P273 2699 aa4.5□□□□□ -1.69
ATPAF1-209ENST00000529214 TRAV12-2A0A075B6T6 113 aa4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 C3orf84H3BNL1 204 aa4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 RBMY1A1P0DJD3 496 aaKnown RBP4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 RBMY1CP0DJD4 496 aa4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 CRISP2P16562 243 aa4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 CSN1S1P47710 185 aa4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 RBMY1FQ15415 496 aaKnown RBP4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 ZC2HC1BQ5TFG8 222 aa4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 Q8NAQ8 132 aa4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 MUC7Q8TAX7 377 aa4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 KCNS1Q96KK3 526 aa4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 ODF3Q96PU9 254 aa4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 CHCHD5Q9BSY4 110 aa4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 C11orf68Q9H3H3 251 aaKnown RBP4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 SCRT2Q9NQ03 307 aa4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 TMEM167BQ9NRX6 74 aa4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 RBM12B-AS1Q9P1G2 102 aa4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 IGHV3OR16-12A0A075B7B8 117 aa4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 IGKV2-40A0A087WW87 121 aaPredicted RBP4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 DEFB4AO15263 64 aa4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 IGKV2D-40P01614 121 aaPredicted RBP4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 COX7CP15954 63 aa4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 LAGE3Q14657 143 aa4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 MAPKAPK5-AS1Q8N8E1 139 aa4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 LINC00479Q96M42 142 aa4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 SDF2L1Q9HCN8 221 aa4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 ZNF492Q9P255 531 aa4.49□□□□□ -1.69
ATPAF1-209ENST00000529214 A0A087WZ39 114 aa4.48□□□□□ -1.69
ATPAF1-209ENST00000529214 PLAC8L1A1L4L8 177 aa4.48□□□□□ -1.69
ATPAF1-209ENST00000529214 KRTAP9-7A8MTY7 169 aa4.48□□□□□ -1.69
ATPAF1-209ENST00000529214 A8MWV9 139 aa4.48□□□□□ -1.69
ATPAF1-209ENST00000529214 KLLNB2CW77 178 aa4.48□□□□□ -1.69
ATPAF1-209ENST00000529214 C8orf87E5RJ46 101 aa4.48□□□□□ -1.69
ATPAF1-209ENST00000529214 INSP01308 110 aa4.48□□□□□ -1.69
ATPAF1-209ENST00000529214 PRM2P04554 102 aa4.48□□□□□ -1.69
ATPAF1-209ENST00000529214 MED14OSP0DP75 135 aa4.48□□□□□ -1.69
ATPAF1-209ENST00000529214 ZNF138P52744 262 aa4.48□□□□□ -1.69
ATPAF1-209ENST00000529214 LINC00310P59036 64 aa4.48□□□□□ -1.69
ATPAF1-209ENST00000529214 CASC10Q5T4H9 136 aa4.48□□□□□ -1.69
ATPAF1-209ENST00000529214 GTSF1Q8WW33 167 aa4.48□□□□□ -1.69
ATPAF1-209ENST00000529214 TP53TG3Q9ULZ0 132 aa4.48□□□□□ -1.69
ATPAF1-209ENST00000529214 LENEPQ9Y5L5 61 aa4.48□□□□□ -1.69
ATPAF1-209ENST00000529214 TRAV12-3A0A0B4J271 114 aa4.47□□□□□ -1.69
ATPAF1-209ENST00000529214 ZNF324O75467 553 aaPredicted RBP4.47□□□□□ -1.69
ATPAF1-209ENST00000529214 TCRAP04437 139 aa4.47□□□□□ -1.69
ATPAF1-209ENST00000529214 ZFAND2AQ8N6M9 145 aa4.47□□□□□ -1.69
ATPAF1-209ENST00000529214 KRTAP9-8Q9BYQ0 159 aa4.47□□□□□ -1.69
ATPAF1-209ENST00000529214 IMUPQ9GZP8 106 aa4.47□□□□□ -1.69
ATPAF1-209ENST00000529214 EPDR1Q9UM22 224 aa4.47□□□□□ -1.69
ATPAF1-209ENST00000529214 STAB2Q8WWQ8 2551 aa4.47□□□□□ -1.69
ATPAF1-209ENST00000529214 SMIM26A0A096LP01 95 aa4.46□□□□□ -1.7
ATPAF1-209ENST00000529214 TRAV8-4A0A0B4J246 113 aa4.46□□□□□ -1.7
ATPAF1-209ENST00000529214 TRBV7-7A0A0K0K1E9 115 aa4.46□□□□□ -1.7
ATPAF1-209ENST00000529214 SNURFLB1AK76 121 aa4.46□□□□□ -1.7
ATPAF1-209ENST00000529214 EPM2AB3EWF7 344 aa4.46□□□□□ -1.7
ATPAF1-209ENST00000529214 E9PLD3 99 aa4.46□□□□□ -1.7
ATPAF1-209ENST00000529214 NDUFC2-KCTD14E9PQ53 114 aa4.46□□□□□ -1.7
ATPAF1-209ENST00000529214 COX8AP10176 69 aa4.46□□□□□ -1.7
ATPAF1-209ENST00000529214 RNASE4P34096 147 aaKnown RBP4.46□□□□□ -1.7
ATPAF1-209ENST00000529214 UBE2G1P62253 170 aa4.46□□□□□ -1.7
ATPAF1-209ENST00000529214 SUMO4Q6EEV6 95 aa4.46□□□□□ -1.7
ATPAF1-209ENST00000529214 C2orf91Q6ZV80 131 aa4.46□□□□□ -1.7
ATPAF1-209ENST00000529214 Q6ZVQ6 151 aa4.46□□□□□ -1.7
ATPAF1-209ENST00000529214 TEN1Q86WV5 123 aa4.46□□□□□ -1.7
ATPAF1-209ENST00000529214 DSCR8Q96T75 97 aa4.46□□□□□ -1.7
ATPAF1-209ENST00000529214 SERP1Q9Y6X1 66 aa4.46□□□□□ -1.7
ATPAF1-209ENST00000529214 ARL2-SNX15V9GYD0 113 aa4.46□□□□□ -1.7
ATPAF1-209ENST00000529214 TRAV8-1A0A0A6YYK1 113 aa4.45□□□□□ -1.7
ATPAF1-209ENST00000529214 TRAV1-1A0A0B4J248 108 aa4.45□□□□□ -1.7
ATPAF1-209ENST00000529214 IGLV2-11P01706 119 aa4.45□□□□□ -1.7
ATPAF1-209ENST00000529214 SPART-AS1P0CW21 52 aa4.45□□□□□ -1.7
ATPAF1-209ENST00000529214 HTN1P15515 57 aa4.45□□□□□ -1.7
ATPAF1-209ENST00000529214 NANOS2P60321 138 aaKnown RBP4.45□□□□□ -1.7
ATPAF1-209ENST00000529214 CCL20P78556 96 aa4.45□□□□□ -1.7
ATPAF1-209ENST00000529214 PRR9Q5T870 116 aa4.45□□□□□ -1.7
ATPAF1-209ENST00000529214 SCGB1D4Q6XE38 83 aa4.45□□□□□ -1.7
ATPAF1-209ENST00000529214 NFE4Q86UQ8 179 aa4.45□□□□□ -1.7
ATPAF1-209ENST00000529214 PCP2Q8IVA1 136 aa4.45□□□□□ -1.7
ATPAF1-209ENST00000529214 AMN1Q8IY45 258 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms