RNA–Protein interactions for RNA: ENST00000527875.1

FOXRED1-208, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 3

Gene FOXRED1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-208ENST00000527875 FAT2Q9NYQ8 4349 aa11.46□□□□□ -0.57
FOXRED1-208ENST00000527875 IGKV3OR2-268A0A0C4DH90 116 aa11.46□□□□□ -0.57
FOXRED1-208ENST00000527875 TIMM21Q9BVV7 248 aa11.46□□□□□ -0.57
FOXRED1-208ENST00000527875 C1orf43Q9BWL3 253 aa11.46□□□□□ -0.57
FOXRED1-208ENST00000527875 CSDC2Q9Y534 153 aaKnown RBP11.46□□□□□ -0.57
FOXRED1-208ENST00000527875 TRGC2P03986 189 aa11.45□□□□□ -0.58
FOXRED1-208ENST00000527875 ZNF664Q8N3J9 261 aa11.45□□□□□ -0.58
FOXRED1-208ENST00000527875 CDC42SE2Q9NRR3 84 aa11.45□□□□□ -0.58
FOXRED1-208ENST00000527875 COX11Q9Y6N1 276 aa11.45□□□□□ -0.58
FOXRED1-208ENST00000527875 IGLV10-54A0A075B6I4 117 aa11.44□□□□□ -0.58
FOXRED1-208ENST00000527875 FA2HQ7L5A8 372 aa11.44□□□□□ -0.58
FOXRED1-208ENST00000527875 TRAV8-4A0A0B4J246 113 aa11.43□□□□□ -0.58
FOXRED1-208ENST00000527875 LINC01546A6NGU7 62 aa11.43□□□□□ -0.58
FOXRED1-208ENST00000527875 RNASE13Q5GAN3 156 aaKnown RBP11.43□□□□□ -0.58
FOXRED1-208ENST00000527875 C2orf66Q6UXQ4 117 aa11.43□□□□□ -0.58
FOXRED1-208ENST00000527875 Q6ZUT4 128 aa11.43□□□□□ -0.58
FOXRED1-208ENST00000527875 MAPKAPK5-AS1Q8N8E1 139 aa11.43□□□□□ -0.58
FOXRED1-208ENST00000527875 SPANXA1Q9NS26 97 aa11.43□□□□□ -0.58
FOXRED1-208ENST00000527875 CYSLTR1Q9Y271 337 aa11.43□□□□□ -0.58
FOXRED1-208ENST00000527875 PKD1P98161 4303 aa11.42□□□□□ -0.58
FOXRED1-208ENST00000527875 A0A1B0GVY2 172 aa11.42□□□□□ -0.58
FOXRED1-208ENST00000527875 BIRC6Q9NR09 4857 aa11.41□□□□□ -0.58
FOXRED1-208ENST00000527875 A0A087WTM6 91 aa11.41□□□□□ -0.58
FOXRED1-208ENST00000527875 G0S2P27469 103 aa11.41□□□□□ -0.58
FOXRED1-208ENST00000527875 KRTAP26-1Q6PEX3 210 aa11.41□□□□□ -0.58
FOXRED1-208ENST00000527875 FAM104AQ969W3 186 aa11.41□□□□□ -0.58
FOXRED1-208ENST00000527875 URB1-AS1Q96HZ7 61 aa11.41□□□□□ -0.58
FOXRED1-208ENST00000527875 OPRPNQ99935 248 aaPredicted RBP11.41□□□□□ -0.58
FOXRED1-208ENST00000527875 LRCOL1A6NCL2 159 aa11.4□□□□□ -0.58
FOXRED1-208ENST00000527875 MRPS36P82909 103 aaKnown RBP11.4□□□□□ -0.58
FOXRED1-208ENST00000527875 BAALCQ8WXS3 180 aa11.4□□□□□ -0.58
FOXRED1-208ENST00000527875 AP5S1Q9NUS5 200 aa11.4□□□□□ -0.58
FOXRED1-208ENST00000527875 PYGO1Q9Y3Y4 419 aa11.4□□□□□ -0.58
FOXRED1-208ENST00000527875 LINC00959A0A1B0GUT2 108 aa11.39□□□□□ -0.59
FOXRED1-208ENST00000527875 EREGO14944 169 aa11.39□□□□□ -0.59
FOXRED1-208ENST00000527875 LINC00614P0C842 121 aa11.39□□□□□ -0.59
FOXRED1-208ENST00000527875 TOMM6Q96B49 74 aa11.39□□□□□ -0.59
FOXRED1-208ENST00000527875 IGLV4-3A0A075B6K6 122 aa11.38□□□□□ -0.59
FOXRED1-208ENST00000527875 LECT2O14960 151 aa11.38□□□□□ -0.59
FOXRED1-208ENST00000527875 RAB5BP61020 215 aa11.38□□□□□ -0.59
FOXRED1-208ENST00000527875 WFDC2Q14508 124 aa11.38□□□□□ -0.59
FOXRED1-208ENST00000527875 CHCHD10Q8WYQ3 142 aaPredicted RBP11.38□□□□□ -0.59
FOXRED1-208ENST00000527875 HECTD4Q9Y4D8 3996 aa11.38□□□□□ -0.59
FOXRED1-208ENST00000527875 EPPK1P58107 5090 aaKnown RBP11.37□□□□□ -0.59
FOXRED1-208ENST00000527875 SS18Q15532 418 aa11.37□□□□□ -0.59
FOXRED1-208ENST00000527875 DNAH11Q96DT5 4516 aa11.37□□□□□ -0.59
FOXRED1-208ENST00000527875 TRAV13-1A0A0B4J241 112 aa11.36□□□□□ -0.59
FOXRED1-208ENST00000527875 GAGE12HA6NDE8 117 aa11.36□□□□□ -0.59
FOXRED1-208ENST00000527875 IGIPA6NJ69 53 aa11.36□□□□□ -0.59
FOXRED1-208ENST00000527875 CCL25O15444 150 aa11.36□□□□□ -0.59
FOXRED1-208ENST00000527875 TMEM141Q96I45 108 aa11.36□□□□□ -0.59
FOXRED1-208ENST00000527875 XCL1P47992 114 aa11.35□□□□□ -0.59
FOXRED1-208ENST00000527875 SPATA12Q7Z6I5 190 aa11.35□□□□□ -0.59
FOXRED1-208ENST00000527875 SCGB3A1Q96QR1 104 aa11.35□□□□□ -0.59
FOXRED1-208ENST00000527875 A0A096LNJ9 63 aa11.34□□□□□ -0.59
FOXRED1-208ENST00000527875 LINC01549A6NIU2 74 aa11.34□□□□□ -0.59
FOXRED1-208ENST00000527875 IFITM10A6NMD0 228 aa11.34□□□□□ -0.59
FOXRED1-208ENST00000527875 C1orf196B1AJZ1 125 aa11.34□□□□□ -0.59
FOXRED1-208ENST00000527875 PMCHL1Q16048 86 aa11.34□□□□□ -0.59
FOXRED1-208ENST00000527875 BAGE3Q86Y29 109 aa11.34□□□□□ -0.59
FOXRED1-208ENST00000527875 Q8N814 137 aa11.34□□□□□ -0.59
FOXRED1-208ENST00000527875 TIMM17AQ99595 171 aa11.34□□□□□ -0.59
FOXRED1-208ENST00000527875 NPSP0C0P6 89 aa11.33□□□□□ -0.6
FOXRED1-208ENST00000527875 KRTAP10-2P60368 255 aa11.33□□□□□ -0.6
FOXRED1-208ENST00000527875 ZC2HC1BQ5TFG8 222 aa11.33□□□□□ -0.6
FOXRED1-208ENST00000527875 Q6ZN92 141 aa11.33□□□□□ -0.6
FOXRED1-208ENST00000527875 TEX43Q6ZNM6 134 aa11.33□□□□□ -0.6
FOXRED1-208ENST00000527875 ERASQ7Z444 233 aa11.33□□□□□ -0.6
FOXRED1-208ENST00000527875 CHCHD1Q96BP2 118 aaKnown RBP11.33□□□□□ -0.6
FOXRED1-208ENST00000527875 USP17L23D6RBM5 183 aa11.32□□□□□ -0.6
FOXRED1-208ENST00000527875 HBDP02042 147 aa11.32□□□□□ -0.6
FOXRED1-208ENST00000527875 FUSP35637 526 aaKnown RBP eCLIP11.32□□□□□ -0.6
FOXRED1-208ENST00000527875 FOXI1Q12951 378 aa11.32□□□□□ -0.6
FOXRED1-208ENST00000527875 LINC00173Q6ZV60 143 aa11.32□□□□□ -0.6
FOXRED1-208ENST00000527875 AMELXQ99217 191 aa11.32□□□□□ -0.6
FOXRED1-208ENST00000527875 VCX2Q9H322 139 aa11.32□□□□□ -0.6
FOXRED1-208ENST00000527875 PAPPA-AS1Q5QFB9 102 aa11.31□□□□□ -0.6
FOXRED1-208ENST00000527875 CD164L2Q6UWJ8 174 aa11.31□□□□□ -0.6
FOXRED1-208ENST00000527875 C2orf88Q9BSF0 95 aa11.31□□□□□ -0.6
FOXRED1-208ENST00000527875 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.29□□□□□ -0.6
FOXRED1-208ENST00000527875 SERF1AO75920 110 aa11.29□□□□□ -0.6
FOXRED1-208ENST00000527875 C14orf177Q52M58 125 aa11.29□□□□□ -0.6
FOXRED1-208ENST00000527875 HIST1H2BKO60814 126 aa11.28□□□□□ -0.6
FOXRED1-208ENST00000527875 HSBP1O75506 76 aa11.28□□□□□ -0.6
FOXRED1-208ENST00000527875 HIST1H2BJP06899 126 aa11.28□□□□□ -0.6
FOXRED1-208ENST00000527875 HIST1H2BOP23527 126 aa11.28□□□□□ -0.6
FOXRED1-208ENST00000527875 HIST1H2BBP33778 126 aa11.28□□□□□ -0.6
FOXRED1-208ENST00000527875 UBE2D1P51668 147 aa11.28□□□□□ -0.6
FOXRED1-208ENST00000527875 HIST1H2BDP58876 126 aa11.28□□□□□ -0.6
FOXRED1-208ENST00000527875 LINC00310P59036 64 aa11.28□□□□□ -0.6
FOXRED1-208ENST00000527875 HIST1H2BCP62807 126 aa11.28□□□□□ -0.6
FOXRED1-208ENST00000527875 HIST2H2BEQ16778 126 aa11.28□□□□□ -0.6
FOXRED1-208ENST00000527875 PDZD11Q5EBL8 140 aa11.28□□□□□ -0.6
FOXRED1-208ENST00000527875 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.28□□□□□ -0.6
FOXRED1-208ENST00000527875 HIST1H2BHQ93079 126 aa11.28□□□□□ -0.6
FOXRED1-208ENST00000527875 HIST1H2BNQ99877 126 aa11.28□□□□□ -0.6
FOXRED1-208ENST00000527875 HIST1H2BMQ99879 126 aa11.28□□□□□ -0.6
FOXRED1-208ENST00000527875 PGPEP1Q9NXJ5 209 aa11.28□□□□□ -0.6
FOXRED1-208ENST00000527875 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.27□□□□□ -0.61
FOXRED1-208ENST00000527875 PRSS1P07477 247 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms