RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 DNAH8Q96JB1 4490 aa12.95□□□□□ -0.34
EXOSC4-202ENST00000525936 OR5A1Q8NGJ0 315 aa12.94□□□□□ -0.34
EXOSC4-202ENST00000525936 TMEM101Q96IK0 257 aa12.94□□□□□ -0.34
EXOSC4-202ENST00000525936 USP17L23D6RBM5 183 aa12.93□□□□□ -0.34
EXOSC4-202ENST00000525936 HLA-DQA1P01909 254 aa12.93□□□□□ -0.34
EXOSC4-202ENST00000525936 TIMM21Q9BVV7 248 aa12.93□□□□□ -0.34
EXOSC4-202ENST00000525936 RPS10P5Q9NQ39 176 aa12.93□□□□□ -0.34
EXOSC4-202ENST00000525936 UBE2D4Q9Y2X8 147 aa12.93□□□□□ -0.34
EXOSC4-202ENST00000525936 S100PP25815 95 aa12.92□□□□□ -0.34
EXOSC4-202ENST00000525936 C14orf177Q52M58 125 aa12.92□□□□□ -0.34
EXOSC4-202ENST00000525936 ZNF664Q8N3J9 261 aa12.92□□□□□ -0.34
EXOSC4-202ENST00000525936 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.91□□□□□ -0.34
EXOSC4-202ENST00000525936 APOC3P02656 99 aa12.91□□□□□ -0.34
EXOSC4-202ENST00000525936 GNB1LQ9BYB4 327 aa12.91□□□□□ -0.34
EXOSC4-202ENST00000525936 KRTAP17-1Q9BYP8 105 aa12.9□□□□□ -0.34
EXOSC4-202ENST00000525936 IGKV3OR2-268A0A0C4DH90 116 aa12.89□□□□□ -0.35
EXOSC4-202ENST00000525936 LINC00959A0A1B0GUT2 108 aa12.89□□□□□ -0.35
EXOSC4-202ENST00000525936 PRSS1P07477 247 aa12.89□□□□□ -0.35
EXOSC4-202ENST00000525936 XGP55808 180 aa12.89□□□□□ -0.35
EXOSC4-202ENST00000525936 SMAGPQ0VAQ4 97 aa12.89□□□□□ -0.35
EXOSC4-202ENST00000525936 SVBPQ8N300 66 aa12.89□□□□□ -0.35
EXOSC4-202ENST00000525936 CHCHD10Q8WYQ3 142 aaPredicted RBP12.89□□□□□ -0.35
EXOSC4-202ENST00000525936 FAM104AQ969W3 186 aa12.89□□□□□ -0.35
EXOSC4-202ENST00000525936 TMEM18Q96B42 140 aa12.89□□□□□ -0.35
EXOSC4-202ENST00000525936 MAP1LC3AQ9H492 121 aa12.89□□□□□ -0.35
EXOSC4-202ENST00000525936 GAGE12HA6NDE8 117 aa12.88□□□□□ -0.35
EXOSC4-202ENST00000525936 RPL39P62891 51 aaKnown RBP12.88□□□□□ -0.35
EXOSC4-202ENST00000525936 DGAT2L7PQ6IED9 249 aa12.88□□□□□ -0.35
EXOSC4-202ENST00000525936 Q8N8P6 123 aa12.88□□□□□ -0.35
EXOSC4-202ENST00000525936 SNAPINO95295 136 aa12.87□□□□□ -0.35
EXOSC4-202ENST00000525936 NDUFA5Q16718 116 aa12.87□□□□□ -0.35
EXOSC4-202ENST00000525936 COX19Q49B96 90 aa12.87□□□□□ -0.35
EXOSC4-202ENST00000525936 LOC389332A0A1B0GUA5 103 aa12.86□□□□□ -0.35
EXOSC4-202ENST00000525936 RAB5AP20339 215 aa12.86□□□□□ -0.35
EXOSC4-202ENST00000525936 FOXI1Q12951 378 aa12.86□□□□□ -0.35
EXOSC4-202ENST00000525936 KIAA1644Q3SXP7 199 aa12.85□□□□□ -0.35
EXOSC4-202ENST00000525936 SPANXA1Q9NS26 97 aa12.85□□□□□ -0.35
EXOSC4-202ENST00000525936 K7EMI3 77 aa12.84□□□□□ -0.35
EXOSC4-202ENST00000525936 CCL25O15444 150 aa12.84□□□□□ -0.35
EXOSC4-202ENST00000525936 MRPS36P82909 103 aaKnown RBP12.84□□□□□ -0.35
EXOSC4-202ENST00000525936 Q6ZSA8 131 aa12.84□□□□□ -0.35
EXOSC4-202ENST00000525936 FAM30AQ9NZY2 134 aa12.84□□□□□ -0.35
EXOSC4-202ENST00000525936 MT-ND6P03923 174 aa12.83□□□□□ -0.36
EXOSC4-202ENST00000525936 SS18Q15532 418 aa12.83□□□□□ -0.36
EXOSC4-202ENST00000525936 Q6ZUT4 128 aa12.83□□□□□ -0.36
EXOSC4-202ENST00000525936 C15orf56Q8N910 161 aa12.83□□□□□ -0.36
EXOSC4-202ENST00000525936 PYGO1Q9Y3Y4 419 aa12.83□□□□□ -0.36
EXOSC4-202ENST00000525936 C1orf196B1AJZ1 125 aa12.82□□□□□ -0.36
EXOSC4-202ENST00000525936 IFI27P40305 119 aaPredicted RBP12.82□□□□□ -0.36
EXOSC4-202ENST00000525936 XCL1P47992 114 aa12.82□□□□□ -0.36
EXOSC4-202ENST00000525936 LINC01620Q4KN68 170 aa12.82□□□□□ -0.36
EXOSC4-202ENST00000525936 RNASE13Q5GAN3 156 aaKnown RBP12.82□□□□□ -0.36
EXOSC4-202ENST00000525936 CD164L2Q6UWJ8 174 aa12.82□□□□□ -0.36
EXOSC4-202ENST00000525936 ALKBH7Q9BT30 221 aaPredicted RBP12.82□□□□□ -0.36
EXOSC4-202ENST00000525936 NXT2Q9NPJ8 142 aaKnown RBP12.82□□□□□ -0.36
EXOSC4-202ENST00000525936 TGIF2-C20orf24A0A0A6YYL0 155 aa12.81□□□□□ -0.36
EXOSC4-202ENST00000525936 SLPIP03973 132 aa12.81□□□□□ -0.36
EXOSC4-202ENST00000525936 CNBPP62633 177 aaKnown RBP12.81□□□□□ -0.36
EXOSC4-202ENST00000525936 CFAP161Q6P656 301 aa12.81□□□□□ -0.36
EXOSC4-202ENST00000525936 OPRPNQ99935 248 aaPredicted RBP12.81□□□□□ -0.36
EXOSC4-202ENST00000525936 hDV102S1A0JD36 115 aa12.8□□□□□ -0.36
EXOSC4-202ENST00000525936 ORMDL2Q53FV1 153 aa12.8□□□□□ -0.36
EXOSC4-202ENST00000525936 SLC7A5P1Q8MH63 180 aa12.8□□□□□ -0.36
EXOSC4-202ENST00000525936 C9orf163Q8N9P6 203 aa12.8□□□□□ -0.36
EXOSC4-202ENST00000525936 YPEL4Q96NS1 127 aa12.8□□□□□ -0.36
EXOSC4-202ENST00000525936 MRPL18Q9H0U6 180 aaKnown RBP12.8□□□□□ -0.36
EXOSC4-202ENST00000525936 FAT1Q14517 4588 aa12.79□□□□□ -0.36
EXOSC4-202ENST00000525936 Q8N1X5 172 aa12.79□□□□□ -0.36
EXOSC4-202ENST00000525936 PCLOQ9Y6V0 5065 aa12.78□□□□□ -0.36
EXOSC4-202ENST00000525936 GVQW2A0A096LPI5 108 aaPredicted RBP12.78□□□□□ -0.36
EXOSC4-202ENST00000525936 LINC01546A6NGU7 62 aa12.78□□□□□ -0.36
EXOSC4-202ENST00000525936 FABP9Q0Z7S8 132 aa12.78□□□□□ -0.36
EXOSC4-202ENST00000525936 KRTAP4-5Q9BYR2 181 aa12.78□□□□□ -0.36
EXOSC4-202ENST00000525936 TRAV13-1A0A0B4J241 112 aa12.77□□□□□ -0.37
EXOSC4-202ENST00000525936 C2orf66Q6UXQ4 117 aa12.77□□□□□ -0.37
EXOSC4-202ENST00000525936 CYSLTR1Q9Y271 337 aa12.77□□□□□ -0.37
EXOSC4-202ENST00000525936 IGLV4-3A0A075B6K6 122 aa12.76□□□□□ -0.37
EXOSC4-202ENST00000525936 IGIPA6NJ69 53 aa12.75□□□□□ -0.37
EXOSC4-202ENST00000525936 NPSP0C0P6 89 aa12.75□□□□□ -0.37
EXOSC4-202ENST00000525936 SDIM1Q6ZPB5 146 aa12.75□□□□□ -0.37
EXOSC4-202ENST00000525936 ABCA13Q86UQ4 5058 aa12.75□□□□□ -0.37
EXOSC4-202ENST00000525936 IGHV1-58A0A0C4DH39 117 aa12.74□□□□□ -0.37
EXOSC4-202ENST00000525936 PRSS3P2Q8NHM4 247 aa12.74□□□□□ -0.37
EXOSC4-202ENST00000525936 AP5S1Q9NUS5 200 aa12.74□□□□□ -0.37
EXOSC4-202ENST00000525936 TRAPPC1Q9Y5R8 145 aa12.74□□□□□ -0.37
EXOSC4-202ENST00000525936 G0S2P27469 103 aa12.73□□□□□ -0.37
EXOSC4-202ENST00000525936 HAMPP81172 84 aa12.73□□□□□ -0.37
EXOSC4-202ENST00000525936 HIGD2BQ4VC39 106 aa12.73□□□□□ -0.37
EXOSC4-202ENST00000525936 TMEM141Q96I45 108 aa12.73□□□□□ -0.37
EXOSC4-202ENST00000525936 IGHV3OR16-9A0A0B4J2B5 98 aa12.72□□□□□ -0.37
EXOSC4-202ENST00000525936 COX7A2LO14548 114 aa12.72□□□□□ -0.37
EXOSC4-202ENST00000525936 TOMM6Q96B49 74 aa12.72□□□□□ -0.37
EXOSC4-202ENST00000525936 AMELXQ99217 191 aa12.72□□□□□ -0.37
EXOSC4-202ENST00000525936 VPS13BQ7Z7G8 4022 aa12.72□□□□□ -0.37
EXOSC4-202ENST00000525936 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.71□□□□□ -0.37
EXOSC4-202ENST00000525936 IFITM10A6NMD0 228 aa12.71□□□□□ -0.37
EXOSC4-202ENST00000525936 CHAC1Q9BUX1 264 aa12.71□□□□□ -0.37
EXOSC4-202ENST00000525936 LINC00173Q6ZV60 143 aa12.7□□□□□ -0.38
EXOSC4-202ENST00000525936 SMCO4Q9NRQ5 59 aa12.7□□□□□ -0.38
EXOSC4-202ENST00000525936 SRRM2Q9UQ35 2752 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms