RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 I3L3M4 83 aa6.64□□□□□ -1.35
VPS26B-203ENST00000525918 XCL1P47992 114 aa6.64□□□□□ -1.35
VPS26B-203ENST00000525918 SRSF9Q13242 221 aaKnown RBP eCLIP6.64□□□□□ -1.35
VPS26B-203ENST00000525918 TMEM101Q96IK0 257 aa6.64□□□□□ -1.35
VPS26B-203ENST00000525918 CARD19Q96LW7 228 aa6.64□□□□□ -1.35
VPS26B-203ENST00000525918 RNASE7Q9H1E1 156 aaKnown RBP6.64□□□□□ -1.35
VPS26B-203ENST00000525918 ZNF561-AS1K7EIQ3 104 aa6.63□□□□□ -1.35
VPS26B-203ENST00000525918 CCL25O15444 150 aa6.63□□□□□ -1.35
VPS26B-203ENST00000525918 BCL2P10415 239 aa6.63□□□□□ -1.35
VPS26B-203ENST00000525918 PMCHP20382 165 aa6.63□□□□□ -1.35
VPS26B-203ENST00000525918 LINC00526Q96FQ7 95 aa6.63□□□□□ -1.35
VPS26B-203ENST00000525918 TRBV6-5A0A0K0K1A5 114 aa6.62□□□□□ -1.35
VPS26B-203ENST00000525918 FAM231BA6NCW3 169 aa6.62□□□□□ -1.35
VPS26B-203ENST00000525918 TAGLN2P37802 199 aaKnown RBP6.62□□□□□ -1.35
VPS26B-203ENST00000525918 FOXA3P55318 350 aaPredicted RBP6.62□□□□□ -1.35
VPS26B-203ENST00000525918 SYCNQ0VAF6 134 aa6.62□□□□□ -1.35
VPS26B-203ENST00000525918 SS18Q15532 418 aa6.62□□□□□ -1.35
VPS26B-203ENST00000525918 OCC1Q8TAD7 63 aa6.62□□□□□ -1.35
VPS26B-203ENST00000525918 K7EN84 100 aa6.61□□□□□ -1.35
VPS26B-203ENST00000525918 ESDP10768 282 aa6.61□□□□□ -1.35
VPS26B-203ENST00000525918 CD164L2Q6UWJ8 174 aa6.61□□□□□ -1.35
VPS26B-203ENST00000525918 MRAP2Q96G30 205 aa6.61□□□□□ -1.35
VPS26B-203ENST00000525918 PTTG1IPP53801 180 aa6.6□□□□□ -1.35
VPS26B-203ENST00000525918 ISOC2Q96AB3 205 aa6.6□□□□□ -1.35
VPS26B-203ENST00000525918 ST20Q9HBF5 79 aa6.6□□□□□ -1.35
VPS26B-203ENST00000525918 CDC42SE2Q9NRR3 84 aa6.6□□□□□ -1.35
VPS26B-203ENST00000525918 LOC107984640A0A0U1RRK4 108 aa6.59□□□□□ -1.35
VPS26B-203ENST00000525918 A8MWL6 223 aa6.59□□□□□ -1.35
VPS26B-203ENST00000525918 GATCO43716 136 aaKnown RBP6.59□□□□□ -1.35
VPS26B-203ENST00000525918 TSHBP01222 138 aa6.59□□□□□ -1.35
VPS26B-203ENST00000525918 CAMPP49913 170 aa6.59□□□□□ -1.35
VPS26B-203ENST00000525918 GAGE2BQ13066 116 aa6.59□□□□□ -1.35
VPS26B-203ENST00000525918 MRPL52Q86TS9 123 aaKnown RBP6.59□□□□□ -1.35
VPS26B-203ENST00000525918 ZNF664Q8N3J9 261 aa6.59□□□□□ -1.35
VPS26B-203ENST00000525918 GAS8-AS1O95177 125 aa6.58□□□□□ -1.36
VPS26B-203ENST00000525918 POLR2KP53803 58 aaKnown RBP6.58□□□□□ -1.36
VPS26B-203ENST00000525918 FAM231DQ6ZW35 169 aa6.58□□□□□ -1.36
VPS26B-203ENST00000525918 TMEM242Q9NWH2 141 aa6.58□□□□□ -1.36
VPS26B-203ENST00000525918 IGLV4-69A0A075B6H9 119 aa6.57□□□□□ -1.36
VPS26B-203ENST00000525918 TRBV27A0A0K0K1C4 114 aa6.57□□□□□ -1.36
VPS26B-203ENST00000525918 C7orf77A4D0Y5 90 aa6.57□□□□□ -1.36
VPS26B-203ENST00000525918 C1orf196B1AJZ1 125 aa6.57□□□□□ -1.36
VPS26B-203ENST00000525918 MALP21145 153 aa6.57□□□□□ -1.36
VPS26B-203ENST00000525918 NUP35Q8NFH5 326 aa6.57□□□□□ -1.36
VPS26B-203ENST00000525918 BORCS7Q96B45 105 aa6.57□□□□□ -1.36
VPS26B-203ENST00000525918 A0A1W2PNN7 141 aa6.56□□□□□ -1.36
VPS26B-203ENST00000525918 TMEM250H0YL14 139 aa6.56□□□□□ -1.36
VPS26B-203ENST00000525918 COX7A2LO14548 114 aa6.56□□□□□ -1.36
VPS26B-203ENST00000525918 APOMO95445 188 aa6.56□□□□□ -1.36
VPS26B-203ENST00000525918 CT83Q5H943 113 aa6.56□□□□□ -1.36
VPS26B-203ENST00000525918 SLC51BQ86UW2 128 aa6.56□□□□□ -1.36
VPS26B-203ENST00000525918 CAMK2N2Q96S95 79 aa6.56□□□□□ -1.36
VPS26B-203ENST00000525918 TMEM191AQ9H0A3 160 aa6.56□□□□□ -1.36
VPS26B-203ENST00000525918 PSORS1C2Q9UIG4 136 aa6.56□□□□□ -1.36
VPS26B-203ENST00000525918 CSDC2Q9Y534 153 aaKnown RBP6.56□□□□□ -1.36
VPS26B-203ENST00000525918 A0A1B0GUT8 65 aa6.55□□□□□ -1.36
VPS26B-203ENST00000525918 MT-ND6P03923 174 aa6.55□□□□□ -1.36
VPS26B-203ENST00000525918 RAB4AP20338 218 aa6.55□□□□□ -1.36
VPS26B-203ENST00000525918 SMAGPQ0VAQ4 97 aa6.55□□□□□ -1.36
VPS26B-203ENST00000525918 C2orf48Q96LS8 159 aa6.55□□□□□ -1.36
VPS26B-203ENST00000525918 VCYO14598 125 aa6.54□□□□□ -1.36
VPS26B-203ENST00000525918 FCER1GP30273 86 aa6.54□□□□□ -1.36
VPS26B-203ENST00000525918 C9orf116Q5BN46 136 aaPredicted RBP6.54□□□□□ -1.36
VPS26B-203ENST00000525918 LCE3BQ5TA77 95 aa6.54□□□□□ -1.36
VPS26B-203ENST00000525918 HIGD1CA8MV81 97 aa6.53□□□□□ -1.36
VPS26B-203ENST00000525918 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.53□□□□□ -1.36
VPS26B-203ENST00000525918 PPP1R17O96001 155 aa6.53□□□□□ -1.36
VPS26B-203ENST00000525918 RPL18AQ02543 176 aaKnown RBP6.53□□□□□ -1.36
VPS26B-203ENST00000525918 C1orf137Q5JT78 98 aa6.53□□□□□ -1.36
VPS26B-203ENST00000525918 AMN1Q8IY45 258 aa6.53□□□□□ -1.36
VPS26B-203ENST00000525918 TSKUQ8WUA8 353 aa6.53□□□□□ -1.36
VPS26B-203ENST00000525918 UBE2D4Q9Y2X8 147 aa6.53□□□□□ -1.36
VPS26B-203ENST00000525918 TRAV13-1A0A0B4J241 112 aa6.52□□□□□ -1.37
VPS26B-203ENST00000525918 RNF151Q2KHN1 245 aa6.52□□□□□ -1.37
VPS26B-203ENST00000525918 RNASE13Q5GAN3 156 aaKnown RBP6.52□□□□□ -1.37
VPS26B-203ENST00000525918 PHF5AQ7RTV0 110 aaKnown RBP6.52□□□□□ -1.37
VPS26B-203ENST00000525918 C5orf38Q86SI9 138 aa6.52□□□□□ -1.37
VPS26B-203ENST00000525918 TCTE3Q8IZS6 198 aa6.52□□□□□ -1.37
VPS26B-203ENST00000525918 KIR2DL4Q99706 377 aa6.52□□□□□ -1.37
VPS26B-203ENST00000525918 CEBPGP53567 150 aa6.51□□□□□ -1.37
VPS26B-203ENST00000525918 SUMO2P61956 95 aaKnown RBP6.51□□□□□ -1.37
VPS26B-203ENST00000525918 BLOC1S1P78537 153 aa6.51□□□□□ -1.37
VPS26B-203ENST00000525918 DIRC1Q969H9 104 aa6.51□□□□□ -1.37
VPS26B-203ENST00000525918 TMEM18Q96B42 140 aa6.51□□□□□ -1.37
VPS26B-203ENST00000525918 OPRPNQ99935 248 aaPredicted RBP6.51□□□□□ -1.37
VPS26B-203ENST00000525918 TIMM21Q9BVV7 248 aa6.51□□□□□ -1.37
VPS26B-203ENST00000525918 LPAP08519 4548 aa6.51□□□□□ -1.37
VPS26B-203ENST00000525918 F8WDY8 70 aa6.5□□□□□ -1.37
VPS26B-203ENST00000525918 SMKR1H3BMG3 65 aa6.5□□□□□ -1.37
VPS26B-203ENST00000525918 IGLV7-43P04211 117 aa6.5□□□□□ -1.37
VPS26B-203ENST00000525918 SPAG11BQ08648 103 aa6.5□□□□□ -1.37
VPS26B-203ENST00000525918 RIGQ13278 110 aa6.5□□□□□ -1.37
VPS26B-203ENST00000525918 LINC01551Q86U37 167 aa6.5□□□□□ -1.37
VPS26B-203ENST00000525918 NRACQ8N912 160 aa6.5□□□□□ -1.37
VPS26B-203ENST00000525918 OR10D4PQ8NGN7 298 aa6.5□□□□□ -1.37
VPS26B-203ENST00000525918 IMMP2LQ96T52 175 aa6.5□□□□□ -1.37
VPS26B-203ENST00000525918 SMIM7Q9BQ49 75 aa6.5□□□□□ -1.37
VPS26B-203ENST00000525918 KRTAP4-12Q9BQ66 201 aa6.5□□□□□ -1.37
VPS26B-203ENST00000525918 OSTCQ9NRP0 149 aa6.5□□□□□ -1.37
VPS26B-203ENST00000525918 PPP1R2P9O14990 202 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms