RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 SPANXA1Q9NS26 97 aa8.24□□□□□ -1.09
CCS-202ENST00000525435 DNAH17Q9UFH2 4485 aa8.24□□□□□ -1.09
CCS-202ENST00000525435 LRCOL1A6NCL2 159 aa8.23□□□□□ -1.09
CCS-202ENST00000525435 CCL25O15444 150 aa8.23□□□□□ -1.09
CCS-202ENST00000525435 ZNF664Q8N3J9 261 aa8.23□□□□□ -1.09
CCS-202ENST00000525435 PRSS3P2Q8NHM4 247 aa8.23□□□□□ -1.09
CCS-202ENST00000525435 UBE2D4Q9Y2X8 147 aa8.23□□□□□ -1.09
CCS-202ENST00000525435 PYGO1Q9Y3Y4 419 aa8.23□□□□□ -1.09
CCS-202ENST00000525435 FAT2Q9NYQ8 4349 aa8.23□□□□□ -1.09
CCS-202ENST00000525435 LINC01546A6NGU7 62 aa8.22□□□□□ -1.09
CCS-202ENST00000525435 LINC01549A6NIU2 74 aa8.22□□□□□ -1.09
CCS-202ENST00000525435 IFI27P40305 119 aaPredicted RBP8.22□□□□□ -1.09
CCS-202ENST00000525435 CBLN2Q8IUK8 224 aa8.22□□□□□ -1.09
CCS-202ENST00000525435 PGPEP1Q9NXJ5 209 aa8.22□□□□□ -1.09
CCS-202ENST00000525435 NPSP0C0P6 89 aa8.21□□□□□ -1.1
CCS-202ENST00000525435 MRPS36P82909 103 aaKnown RBP8.21□□□□□ -1.1
CCS-202ENST00000525435 MAPKAPK5-AS1Q8N8E1 139 aa8.21□□□□□ -1.1
CCS-202ENST00000525435 CDPF1Q6NVV7 123 aa8.2□□□□□ -1.1
CCS-202ENST00000525435 KRTAP26-1Q6PEX3 210 aa8.2□□□□□ -1.1
CCS-202ENST00000525435 CYSLTR1Q9Y271 337 aa8.2□□□□□ -1.1
CCS-202ENST00000525435 COLCA2A8K830 154 aa8.19□□□□□ -1.1
CCS-202ENST00000525435 RPL39P62891 51 aaKnown RBP8.19□□□□□ -1.1
CCS-202ENST00000525435 C14orf177Q52M58 125 aa8.19□□□□□ -1.1
CCS-202ENST00000525435 CLPSL2Q6UWE3 100 aa8.19□□□□□ -1.1
CCS-202ENST00000525435 NTN5Q8WTR8 489 aaPredicted RBP8.19□□□□□ -1.1
CCS-202ENST00000525435 LINC00959A0A1B0GUT2 108 aa8.18□□□□□ -1.1
CCS-202ENST00000525435 C1orf196B1AJZ1 125 aa8.18□□□□□ -1.1
CCS-202ENST00000525435 RAB5BP61020 215 aa8.18□□□□□ -1.1
CCS-202ENST00000525435 SS18Q15532 418 aa8.18□□□□□ -1.1
CCS-202ENST00000525435 C2orf66Q6UXQ4 117 aa8.18□□□□□ -1.1
CCS-202ENST00000525435 FA2HQ7L5A8 372 aa8.18□□□□□ -1.1
CCS-202ENST00000525435 SPATA12Q7Z6I5 190 aa8.18□□□□□ -1.1
CCS-202ENST00000525435 Q8N814 137 aa8.18□□□□□ -1.1
CCS-202ENST00000525435 C18orf32Q8TCD1 76 aa8.18□□□□□ -1.1
CCS-202ENST00000525435 BAALCQ8WXS3 180 aa8.18□□□□□ -1.1
CCS-202ENST00000525435 IGLV10-54A0A075B6I4 117 aa8.17□□□□□ -1.1
CCS-202ENST00000525435 LINC00614P0C842 121 aa8.17□□□□□ -1.1
CCS-202ENST00000525435 S100A1P23297 94 aa8.17□□□□□ -1.1
CCS-202ENST00000525435 PAPPA-AS1Q5QFB9 102 aa8.17□□□□□ -1.1
CCS-202ENST00000525435 CHCHD10Q8WYQ3 142 aaPredicted RBP8.17□□□□□ -1.1
CCS-202ENST00000525435 TOMM6Q96B49 74 aa8.17□□□□□ -1.1
CCS-202ENST00000525435 AP5S1Q9NUS5 200 aa8.17□□□□□ -1.1
CCS-202ENST00000525435 IGKV3OR2-268A0A0C4DH90 116 aa8.16□□□□□ -1.1
CCS-202ENST00000525435 IGIPA6NJ69 53 aa8.16□□□□□ -1.1
CCS-202ENST00000525435 CFAP161Q6P656 301 aa8.16□□□□□ -1.1
CCS-202ENST00000525435 CD164L2Q6UWJ8 174 aa8.16□□□□□ -1.1
CCS-202ENST00000525435 FAM104AQ969W3 186 aa8.16□□□□□ -1.1
CCS-202ENST00000525435 HECTD4Q9Y4D8 3996 aa8.16□□□□□ -1.1
CCS-202ENST00000525435 GAGE12HA6NDE8 117 aa8.15□□□□□ -1.1
CCS-202ENST00000525435 KRTAP10-2P60368 255 aa8.15□□□□□ -1.1
CCS-202ENST00000525435 Q6ZUT4 128 aa8.15□□□□□ -1.1
CCS-202ENST00000525435 ERASQ7Z444 233 aa8.15□□□□□ -1.1
CCS-202ENST00000525435 TMEM141Q96I45 108 aa8.15□□□□□ -1.1
CCS-202ENST00000525435 TIMM17AQ99595 171 aa8.15□□□□□ -1.1
CCS-202ENST00000525435 IGLV4-3A0A075B6K6 122 aa8.14□□□□□ -1.11
CCS-202ENST00000525435 C16orf90A8MZG2 172 aa8.14□□□□□ -1.11
CCS-202ENST00000525435 USP17L23D6RBM5 183 aa8.14□□□□□ -1.11
CCS-202ENST00000525435 TRGC2P03986 189 aa8.14□□□□□ -1.11
CCS-202ENST00000525435 Q6ZN92 141 aa8.14□□□□□ -1.11
CCS-202ENST00000525435 VCX2Q9H322 139 aa8.14□□□□□ -1.11
CCS-202ENST00000525435 PKD1P98161 4303 aa8.13□□□□□ -1.11
CCS-202ENST00000525435 TRAV13-1A0A0B4J241 112 aa8.13□□□□□ -1.11
CCS-202ENST00000525435 XCL1P47992 114 aa8.13□□□□□ -1.11
CCS-202ENST00000525435 FOXI1Q12951 378 aa8.13□□□□□ -1.11
CCS-202ENST00000525435 WFDC2Q14508 124 aa8.13□□□□□ -1.11
CCS-202ENST00000525435 TEX43Q6ZNM6 134 aa8.13□□□□□ -1.11
CCS-202ENST00000525435 CHCHD1Q96BP2 118 aaKnown RBP8.13□□□□□ -1.11
CCS-202ENST00000525435 SCGB3A1Q96QR1 104 aa8.13□□□□□ -1.11
CCS-202ENST00000525435 AMELXQ99217 191 aa8.13□□□□□ -1.11
CCS-202ENST00000525435 OPRPNQ99935 248 aaPredicted RBP8.13□□□□□ -1.11
CCS-202ENST00000525435 IFITM10A6NMD0 228 aa8.12□□□□□ -1.11
CCS-202ENST00000525435 LECT2O14960 151 aa8.12□□□□□ -1.11
CCS-202ENST00000525435 RNASE13Q5GAN3 156 aaKnown RBP8.12□□□□□ -1.11
CCS-202ENST00000525435 C2orf88Q9BSF0 95 aa8.12□□□□□ -1.11
CCS-202ENST00000525435 IGLV5-52A0A0A0MRZ9 124 aa8.11□□□□□ -1.11
CCS-202ENST00000525435 SCO1O75880 301 aa8.11□□□□□ -1.11
CCS-202ENST00000525435 URB1-AS1Q96HZ7 61 aa8.11□□□□□ -1.11
CCS-202ENST00000525435 PKHD1P08F94 4074 aa8.11□□□□□ -1.11
CCS-202ENST00000525435 COX7A2LO14548 114 aa8.1□□□□□ -1.11
CCS-202ENST00000525435 PRSS1P07477 247 aa8.1□□□□□ -1.11
CCS-202ENST00000525435 GCSHP23434 173 aa8.1□□□□□ -1.11
CCS-202ENST00000525435 SEC11AP67812 179 aa8.1□□□□□ -1.11
CCS-202ENST00000525435 DNAH11Q96DT5 4516 aa8.09□□□□□ -1.11
CCS-202ENST00000525435 IGHV3OR16-9A0A0B4J2B5 98 aa8.09□□□□□ -1.11
CCS-202ENST00000525435 IGHV1-58A0A0C4DH39 117 aa8.09□□□□□ -1.11
CCS-202ENST00000525435 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.09□□□□□ -1.11
CCS-202ENST00000525435 ATP6V1G1O75348 118 aa8.09□□□□□ -1.11
CCS-202ENST00000525435 HBDP02042 147 aa8.09□□□□□ -1.11
CCS-202ENST00000525435 UBE2D1P51668 147 aa8.09□□□□□ -1.11
CCS-202ENST00000525435 FAM19A3Q7Z5A8 133 aa8.09□□□□□ -1.11
CCS-202ENST00000525435 BAGE3Q86Y29 109 aa8.09□□□□□ -1.11
CCS-202ENST00000525435 A0A096LNJ9 63 aa8.08□□□□□ -1.12
CCS-202ENST00000525435 GVQW2A0A096LPI5 108 aaPredicted RBP8.08□□□□□ -1.12
CCS-202ENST00000525435 hDV102S1A0JD36 115 aa8.08□□□□□ -1.12
CCS-202ENST00000525435 ATP5LO75964 103 aa8.08□□□□□ -1.12
CCS-202ENST00000525435 APOMO95445 188 aa8.08□□□□□ -1.12
CCS-202ENST00000525435 CNBPP62633 177 aaKnown RBP8.08□□□□□ -1.12
CCS-202ENST00000525435 LINC00242Q5T6M2 205 aa8.08□□□□□ -1.12
CCS-202ENST00000525435 LINC00173Q6ZV60 143 aa8.08□□□□□ -1.12
CCS-202ENST00000525435 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms