RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 SCXQ7RTU7 201 aa11.98□□□□□ -0.49
TSPAN4-215ENST00000525334 ATP5L2Q7Z4Y8 100 aa11.98□□□□□ -0.49
TSPAN4-215ENST00000525334 KIR2DL4Q99706 377 aa11.98□□□□□ -0.49
TSPAN4-215ENST00000525334 C20orf78Q9BR46 151 aa11.98□□□□□ -0.49
TSPAN4-215ENST00000525334 FAM229AH3BQW9 127 aa11.97□□□□□ -0.49
TSPAN4-215ENST00000525334 TNFRSF6BO95407 300 aa11.97□□□□□ -0.49
TSPAN4-215ENST00000525334 INAFM2P0DMQ5 153 aa11.97□□□□□ -0.49
TSPAN4-215ENST00000525334 ANAPC16Q96DE5 110 aa11.97□□□□□ -0.49
TSPAN4-215ENST00000525334 C9orf163Q8N9P6 203 aa11.96□□□□□ -0.49
TSPAN4-215ENST00000525334 CHAC1Q9BUX1 264 aa11.96□□□□□ -0.49
TSPAN4-215ENST00000525334 CDC42SE2Q9NRR3 84 aa11.96□□□□□ -0.49
TSPAN4-215ENST00000525334 SRRM2Q9UQ35 2752 aaKnown RBP11.96□□□□□ -0.49
TSPAN4-215ENST00000525334 NPYP01303 97 aa11.95□□□□□ -0.5
TSPAN4-215ENST00000525334 CNBPP62633 177 aaKnown RBP11.95□□□□□ -0.5
TSPAN4-215ENST00000525334 RPL32P62910 135 aaKnown RBP11.95□□□□□ -0.5
TSPAN4-215ENST00000525334 C15orf56Q8N910 161 aa11.95□□□□□ -0.5
TSPAN4-215ENST00000525334 LINC00959A0A1B0GUT2 108 aa11.94□□□□□ -0.5
TSPAN4-215ENST00000525334 PPBPP02775 128 aa11.94□□□□□ -0.5
TSPAN4-215ENST00000525334 ADCYAP1P18509 176 aa11.94□□□□□ -0.5
TSPAN4-215ENST00000525334 FOXI1Q12951 378 aa11.94□□□□□ -0.5
TSPAN4-215ENST00000525334 UQCC3Q6UW78 93 aa11.94□□□□□ -0.5
TSPAN4-215ENST00000525334 ZNF664Q8N3J9 261 aa11.94□□□□□ -0.5
TSPAN4-215ENST00000525334 SMIM2Q9BVW6 85 aa11.94□□□□□ -0.5
TSPAN4-215ENST00000525334 UBE2D4Q9Y2X8 147 aa11.94□□□□□ -0.5
TSPAN4-215ENST00000525334 XCL1P47992 114 aa11.93□□□□□ -0.5
TSPAN4-215ENST00000525334 CFAP161Q6P656 301 aa11.93□□□□□ -0.5
TSPAN4-215ENST00000525334 CIRBP-AS1Q8TBR5 109 aa11.93□□□□□ -0.5
TSPAN4-215ENST00000525334 AP5S1Q9NUS5 200 aa11.93□□□□□ -0.5
TSPAN4-215ENST00000525334 TMEM218A2RU14 115 aa11.92□□□□□ -0.5
TSPAN4-215ENST00000525334 PHOX2AO14813 284 aa11.92□□□□□ -0.5
TSPAN4-215ENST00000525334 CCL25O15444 150 aa11.92□□□□□ -0.5
TSPAN4-215ENST00000525334 SLPIP03973 132 aa11.92□□□□□ -0.5
TSPAN4-215ENST00000525334 ORMDL3Q8N138 153 aa11.92□□□□□ -0.5
TSPAN4-215ENST00000525334 LINC00528Q8N1L1 170 aa11.92□□□□□ -0.5
TSPAN4-215ENST00000525334 CSDC2Q9Y534 153 aaKnown RBP11.92□□□□□ -0.5
TSPAN4-215ENST00000525334 TCAPO15273 167 aa11.91□□□□□ -0.5
TSPAN4-215ENST00000525334 SMAGPQ0VAQ4 97 aa11.91□□□□□ -0.5
TSPAN4-215ENST00000525334 HIGD2BQ4VC39 106 aa11.91□□□□□ -0.5
TSPAN4-215ENST00000525334 TMEM136Q6ZRR5 245 aa11.91□□□□□ -0.5
TSPAN4-215ENST00000525334 SS18Q15532 418 aa11.9□□□□□ -0.5
TSPAN4-215ENST00000525334 RNASE13Q5GAN3 156 aaKnown RBP11.9□□□□□ -0.5
TSPAN4-215ENST00000525334 SDIM1Q6ZPB5 146 aa11.9□□□□□ -0.5
TSPAN4-215ENST00000525334 TMEM18Q96B42 140 aa11.9□□□□□ -0.5
TSPAN4-215ENST00000525334 PRELID3AQ96N28 172 aa11.9□□□□□ -0.5
TSPAN4-215ENST00000525334 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.89□□□□□ -0.51
TSPAN4-215ENST00000525334 Q6ZUT4 128 aa11.89□□□□□ -0.51
TSPAN4-215ENST00000525334 TIMM21Q9BVV7 248 aa11.89□□□□□ -0.51
TSPAN4-215ENST00000525334 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.89□□□□□ -0.51
TSPAN4-215ENST00000525334 GVQW2A0A096LPI5 108 aaPredicted RBP11.88□□□□□ -0.51
TSPAN4-215ENST00000525334 RPL39P62891 51 aaKnown RBP11.88□□□□□ -0.51
TSPAN4-215ENST00000525334 IGHV3-64A0A075B6Q5 118 aa11.87□□□□□ -0.51
TSPAN4-215ENST00000525334 PANO1I0J062 215 aa11.87□□□□□ -0.51
TSPAN4-215ENST00000525334 PLA2G1BP04054 148 aaKnown RBP11.87□□□□□ -0.51
TSPAN4-215ENST00000525334 CD164L2Q6UWJ8 174 aa11.87□□□□□ -0.51
TSPAN4-215ENST00000525334 COMMD7Q86VX2 200 aa11.87□□□□□ -0.51
TSPAN4-215ENST00000525334 IMMP2LQ96T52 175 aa11.86□□□□□ -0.51
TSPAN4-215ENST00000525334 SEC11CQ9BY50 192 aa11.86□□□□□ -0.51
TSPAN4-215ENST00000525334 FLG2Q5D862 2391 aaPredicted RBP11.86□□□□□ -0.51
TSPAN4-215ENST00000525334 C1orf196B1AJZ1 125 aa11.85□□□□□ -0.51
TSPAN4-215ENST00000525334 CTDSP1Q9GZU7 261 aa11.85□□□□□ -0.51
TSPAN4-215ENST00000525334 LAMTOR2Q9Y2Q5 125 aa11.85□□□□□ -0.51
TSPAN4-215ENST00000525334 MYCBP2O75592 4640 aa11.85□□□□□ -0.51
TSPAN4-215ENST00000525334 TRAV13-1A0A0B4J241 112 aa11.84□□□□□ -0.51
TSPAN4-215ENST00000525334 IGHV1-58A0A0C4DH39 117 aa11.84□□□□□ -0.51
TSPAN4-215ENST00000525334 RAB5AP20339 215 aa11.84□□□□□ -0.51
TSPAN4-215ENST00000525334 FAM104AQ969W3 186 aa11.84□□□□□ -0.51
TSPAN4-215ENST00000525334 SPANXA1Q9NS26 97 aa11.84□□□□□ -0.51
TSPAN4-215ENST00000525334 LOC389332A0A1B0GUA5 103 aa11.83□□□□□ -0.52
TSPAN4-215ENST00000525334 PRSS47A8MTI9 375 aa11.83□□□□□ -0.52
TSPAN4-215ENST00000525334 CIRBPQ14011 172 aaKnown RBP11.83□□□□□ -0.52
TSPAN4-215ENST00000525334 MAP1LC3AQ9H492 121 aa11.83□□□□□ -0.52
TSPAN4-215ENST00000525334 CHTF8P0CG12 524 aa11.82□□□□□ -0.52
TSPAN4-215ENST00000525334 OPRPNQ99935 248 aaPredicted RBP11.82□□□□□ -0.52
TSPAN4-215ENST00000525334 COX7A2LO14548 114 aa11.81□□□□□ -0.52
TSPAN4-215ENST00000525334 MRPS36P82909 103 aaKnown RBP11.81□□□□□ -0.52
TSPAN4-215ENST00000525334 LINC00526Q96FQ7 95 aa11.81□□□□□ -0.52
TSPAN4-215ENST00000525334 DMBT1Q9UGM3 2413 aaPredicted RBP11.81□□□□□ -0.52
TSPAN4-215ENST00000525334 MALP21145 153 aa11.8□□□□□ -0.52
TSPAN4-215ENST00000525334 COX6A2Q02221 97 aa11.8□□□□□ -0.52
TSPAN4-215ENST00000525334 TRAV9-1A0A075B6T8 112 aa11.79□□□□□ -0.52
TSPAN4-215ENST00000525334 KRTAP10-4P60372 401 aaPredicted RBP11.79□□□□□ -0.52
TSPAN4-215ENST00000525334 Q8N8P6 123 aa11.79□□□□□ -0.52
TSPAN4-215ENST00000525334 SPACA4Q8TDM5 124 aa11.79□□□□□ -0.52
TSPAN4-215ENST00000525334 ZNF561-AS1K7EIQ3 104 aa11.78□□□□□ -0.52
TSPAN4-215ENST00000525334 IFI27P40305 119 aaPredicted RBP11.78□□□□□ -0.52
TSPAN4-215ENST00000525334 C10orf91Q5T1B1 145 aa11.78□□□□□ -0.52
TSPAN4-215ENST00000525334 C5orf38Q86SI9 138 aa11.78□□□□□ -0.52
TSPAN4-215ENST00000525334 PRSS3P2Q8NHM4 247 aa11.78□□□□□ -0.52
TSPAN4-215ENST00000525334 IFITM10A6NMD0 228 aa11.77□□□□□ -0.53
TSPAN4-215ENST00000525334 S100PP25815 95 aa11.77□□□□□ -0.53
TSPAN4-215ENST00000525334 CARD19Q96LW7 228 aa11.77□□□□□ -0.53
TSPAN4-215ENST00000525334 CARHSP1Q9Y2V2 147 aaKnown RBP11.77□□□□□ -0.53
TSPAN4-215ENST00000525334 HERC1Q15751 4861 aa11.77□□□□□ -0.53
TSPAN4-215ENST00000525334 A0A087WYN8 130 aa11.76□□□□□ -0.53
TSPAN4-215ENST00000525334 KIAA1644Q3SXP7 199 aa11.76□□□□□ -0.53
TSPAN4-215ENST00000525334 DPH3Q96FX2 82 aa11.76□□□□□ -0.53
TSPAN4-215ENST00000525334 PYGO1Q9Y3Y4 419 aa11.76□□□□□ -0.53
TSPAN4-215ENST00000525334 IGLV4-69A0A075B6H9 119 aa11.75□□□□□ -0.53
TSPAN4-215ENST00000525334 IGLV4-3A0A075B6K6 122 aa11.75□□□□□ -0.53
TSPAN4-215ENST00000525334 RPL37AP61513 92 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms