RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-222	ENST00000523555	OR5A1	Q8NGJ0	315 aa		6.13	□□□□□ -1.43
PABPC1-222	ENST00000523555	CIRBP-AS1	Q8TBR5	109 aa		6.13	□□□□□ -1.43
PABPC1-222	ENST00000523555	CDC42SE2	Q9NRR3	84 aa		6.13	□□□□□ -1.43
PABPC1-222	ENST00000523555	SRRM2	Q9UQ35	2752 aa	Known RBP	6.13	□□□□□ -1.43
PABPC1-222	ENST00000523555	LRP1	Q07954	4544 aa	Known RBP	6.13	□□□□□ -1.43
PABPC1-222	ENST00000523555	LINC00959	A0A1B0GUT2	108 aa		6.12	□□□□□ -1.43
PABPC1-222	ENST00000523555	hDV102S1	A0JD36	115 aa		6.12	□□□□□ -1.43
PABPC1-222	ENST00000523555	LINC00862	A6NCI5	91 aa		6.12	□□□□□ -1.43
PABPC1-222	ENST00000523555	ZNF25	P17030	456 aa	Predicted RBP	6.12	□□□□□ -1.43
PABPC1-222	ENST00000523555	FCER1G	P30273	86 aa		6.12	□□□□□ -1.43
PABPC1-222	ENST00000523555	RPL39	P62891	51 aa	Known RBP	6.12	□□□□□ -1.43
PABPC1-222	ENST00000523555	PNRC1	Q12796	327 aa	Predicted RBP	6.12	□□□□□ -1.43
PABPC1-222	ENST00000523555	HIGD2B	Q4VC39	106 aa		6.12	□□□□□ -1.43
PABPC1-222	ENST00000523555	MRPL52	Q86TS9	123 aa	Known RBP	6.12	□□□□□ -1.43
PABPC1-222	ENST00000523555	LINC00528	Q8N1L1	170 aa		6.12	□□□□□ -1.43
PABPC1-222	ENST00000523555	FAM104A	Q969W3	186 aa		6.12	□□□□□ -1.43
PABPC1-222	ENST00000523555	CHAC1	Q9BUX1	264 aa		6.12	□□□□□ -1.43
PABPC1-222	ENST00000523555	UBE2D4	Q9Y2X8	147 aa		6.12	□□□□□ -1.43
PABPC1-222	ENST00000523555	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	6.12	□□□□□ -1.43
PABPC1-222	ENST00000523555	HERC1	Q15751	4861 aa		6.12	□□□□□ -1.43
PABPC1-222	ENST00000523555	PPP1R2P9	O14990	202 aa		6.11	□□□□□ -1.43
PABPC1-222	ENST00000523555	TCAP	O15273	167 aa		6.11	□□□□□ -1.43
PABPC1-222	ENST00000523555	CCL25	O15444	150 aa		6.11	□□□□□ -1.43
PABPC1-222	ENST00000523555	INAFM2	P0DMQ5	153 aa		6.11	□□□□□ -1.43
PABPC1-222	ENST00000523555	XCL1	P47992	114 aa		6.11	□□□□□ -1.43
PABPC1-222	ENST00000523555	CNBP	P62633	177 aa	Known RBP	6.11	□□□□□ -1.43
PABPC1-222	ENST00000523555	DGAT2L7P	Q6IED9	249 aa		6.11	□□□□□ -1.43
PABPC1-222	ENST00000523555		Q6ZUT4	128 aa		6.11	□□□□□ -1.43
PABPC1-222	ENST00000523555	ATP5L2	Q7Z4Y8	100 aa		6.11	□□□□□ -1.43
PABPC1-222	ENST00000523555	ZNF664	Q8N3J9	261 aa		6.11	□□□□□ -1.43
PABPC1-222	ENST00000523555	CLRN3	Q8NCR9	226 aa		6.11	□□□□□ -1.43
PABPC1-222	ENST00000523555	ANAPC16	Q96DE5	110 aa		6.11	□□□□□ -1.43
PABPC1-222	ENST00000523555	TMEM101	Q96IK0	257 aa		6.11	□□□□□ -1.43
PABPC1-222	ENST00000523555	BTF3L4	Q96K17	158 aa		6.11	□□□□□ -1.43
PABPC1-222	ENST00000523555	C20orf78	Q9BR46	151 aa		6.11	□□□□□ -1.43
PABPC1-222	ENST00000523555	SMIM2	Q9BVW6	85 aa		6.11	□□□□□ -1.43
PABPC1-222	ENST00000523555	FLG2	Q5D862	2391 aa	Predicted RBP	6.11	□□□□□ -1.43
PABPC1-222	ENST00000523555	TMEM218	A2RU14	115 aa		6.1	□□□□□ -1.43
PABPC1-222	ENST00000523555		F8W036	122 aa		6.1	□□□□□ -1.43
PABPC1-222	ENST00000523555	PPP1R17	O96001	155 aa		6.1	□□□□□ -1.43
PABPC1-222	ENST00000523555	MT-ND4L	P03901	98 aa		6.1	□□□□□ -1.43
PABPC1-222	ENST00000523555	KRTAP10-4	P60372	401 aa	Predicted RBP	6.1	□□□□□ -1.43
PABPC1-222	ENST00000523555	RPL32	P62910	135 aa	Known RBP	6.1	□□□□□ -1.43
PABPC1-222	ENST00000523555	SDIM1	Q6ZPB5	146 aa		6.1	□□□□□ -1.43
PABPC1-222	ENST00000523555	LINC00526	Q96FQ7	95 aa		6.1	□□□□□ -1.43
PABPC1-222	ENST00000523555	KIR2DL4	Q99706	377 aa		6.1	□□□□□ -1.43
PABPC1-222	ENST00000523555	FAM229A	H3BQW9	127 aa		6.09	□□□□□ -1.43
PABPC1-222	ENST00000523555	S100A8	P05109	93 aa		6.09	□□□□□ -1.43
PABPC1-222	ENST00000523555	CHTF8	P0CG12	524 aa		6.09	□□□□□ -1.43
PABPC1-222	ENST00000523555	UQCC3	Q6UW78	93 aa		6.09	□□□□□ -1.43
PABPC1-222	ENST00000523555	TMEM136	Q6ZRR5	245 aa		6.09	□□□□□ -1.43
PABPC1-222	ENST00000523555	COMMD7	Q86VX2	200 aa		6.09	□□□□□ -1.43
PABPC1-222	ENST00000523555	ORMDL3	Q8N138	153 aa		6.09	□□□□□ -1.43
PABPC1-222	ENST00000523555	PRELID3A	Q96N28	172 aa		6.09	□□□□□ -1.43
PABPC1-222	ENST00000523555	OPRPN	Q99935	248 aa	Predicted RBP	6.09	□□□□□ -1.43
PABPC1-222	ENST00000523555	GVQW2	A0A096LPI5	108 aa	Predicted RBP	6.08	□□□□□ -1.44
PABPC1-222	ENST00000523555	CSDC2	Q9Y534	153 aa	Known RBP	6.08	□□□□□ -1.44
PABPC1-222	ENST00000523555	TRAV13-1	A0A0B4J241	112 aa		6.07	□□□□□ -1.44
PABPC1-222	ENST00000523555	LOC389332	A0A1B0GUA5	103 aa		6.07	□□□□□ -1.44
PABPC1-222	ENST00000523555	PHOX2A	O14813	284 aa		6.07	□□□□□ -1.44
PABPC1-222	ENST00000523555	PPBP	P02775	128 aa		6.07	□□□□□ -1.44
PABPC1-222	ENST00000523555	SS18	Q15532	418 aa		6.07	□□□□□ -1.44
PABPC1-222	ENST00000523555	AP5S1	Q9NUS5	200 aa		6.07	□□□□□ -1.44
PABPC1-222	ENST00000523555	IGHV3-64	A0A075B6Q5	118 aa		6.06	□□□□□ -1.44
PABPC1-222	ENST00000523555	PRSS47	A8MTI9	375 aa		6.06	□□□□□ -1.44
PABPC1-222	ENST00000523555	COX6A2	Q02221	97 aa		6.06	□□□□□ -1.44
PABPC1-222	ENST00000523555	CIRBP	Q14011	172 aa	Known RBP	6.06	□□□□□ -1.44
PABPC1-222	ENST00000523555	KIAA1644	Q3SXP7	199 aa		6.06	□□□□□ -1.44
PABPC1-222	ENST00000523555	CFAP161	Q6P656	301 aa		6.06	□□□□□ -1.44
PABPC1-222	ENST00000523555	CD164L2	Q6UWJ8	174 aa		6.06	□□□□□ -1.44
PABPC1-222	ENST00000523555	PRSS3P2	Q8NHM4	247 aa		6.06	□□□□□ -1.44
PABPC1-222	ENST00000523555	TIMM21	Q9BVV7	248 aa		6.06	□□□□□ -1.44
PABPC1-222	ENST00000523555	SEC11C	Q9BY50	192 aa		6.06	□□□□□ -1.44
PABPC1-222	ENST00000523555	IGHV1-58	A0A0C4DH39	117 aa		6.05	□□□□□ -1.44
PABPC1-222	ENST00000523555	C10orf91	Q5T1B1	145 aa		6.05	□□□□□ -1.44
PABPC1-222	ENST00000523555	ZC2HC1B	Q5TFG8	222 aa		6.05	□□□□□ -1.44
PABPC1-222	ENST00000523555	C5orf38	Q86SI9	138 aa		6.05	□□□□□ -1.44
PABPC1-222	ENST00000523555	SPACA4	Q8TDM5	124 aa		6.05	□□□□□ -1.44
PABPC1-222	ENST00000523555	IMMP2L	Q96T52	175 aa		6.05	□□□□□ -1.44
PABPC1-222	ENST00000523555	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	6.04	□□□□□ -1.44
PABPC1-222	ENST00000523555	C1orf196	B1AJZ1	125 aa		6.04	□□□□□ -1.44
PABPC1-222	ENST00000523555	HNRNPA3	P51991	378 aa	Known RBP	6.04	□□□□□ -1.44
PABPC1-222	ENST00000523555	NDUFA5	Q16718	116 aa		6.04	□□□□□ -1.44
PABPC1-222	ENST00000523555	TMEM18	Q96B42	140 aa		6.04	□□□□□ -1.44
PABPC1-222	ENST00000523555	CTDSP1	Q9GZU7	261 aa		6.04	□□□□□ -1.44
PABPC1-222	ENST00000523555	MAP1LC3A	Q9H492	121 aa		6.04	□□□□□ -1.44
PABPC1-222	ENST00000523555	SPANXA1	Q9NS26	97 aa		6.04	□□□□□ -1.44
PABPC1-222	ENST00000523555	IGLV4-69	A0A075B6H9	119 aa		6.03	□□□□□ -1.44
PABPC1-222	ENST00000523555	IGLV4-3	A0A075B6K6	122 aa		6.03	□□□□□ -1.44
PABPC1-222	ENST00000523555		A0A087WYN8	130 aa		6.03	□□□□□ -1.44
PABPC1-222	ENST00000523555		A0A096LNI7	61 aa		6.03	□□□□□ -1.44
PABPC1-222	ENST00000523555	IGKV2-24	A0A0C4DH68	120 aa		6.03	□□□□□ -1.44
PABPC1-222	ENST00000523555	PLA2G1B	P04054	148 aa	Known RBP	6.03	□□□□□ -1.44
PABPC1-222	ENST00000523555	MRPS36	P82909	103 aa	Known RBP	6.03	□□□□□ -1.44
PABPC1-222	ENST00000523555		Q8N8P6	123 aa		6.03	□□□□□ -1.44
PABPC1-222	ENST00000523555	LAMTOR2	Q9Y2Q5	125 aa		6.03	□□□□□ -1.44
PABPC1-222	ENST00000523555	COX7A2L	O14548	114 aa		6.02	□□□□□ -1.45
PABPC1-222	ENST00000523555	RAB5A	P20339	215 aa		6.02	□□□□□ -1.45
PABPC1-222	ENST00000523555	IFI27	P40305	119 aa	Predicted RBP	6.02	□□□□□ -1.45
PABPC1-222	ENST00000523555	SMAGP	Q0VAQ4	97 aa		6.02	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms