RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 KRTAP1-3Q8IUG1 177 aa12.84□□□□□ -0.35
IKBKB-228ENST00000523517 A0A1B0GV72 72 aa12.83□□□□□ -0.36
IKBKB-228ENST00000523517 LINC01600Q96MT4 127 aa12.83□□□□□ -0.36
IKBKB-228ENST00000523517 IFITM1P13164 125 aa12.83□□□□□ -0.36
IKBKB-228ENST00000523517 A0A1W2PRX2 142 aa12.82□□□□□ -0.36
IKBKB-228ENST00000523517 TMEM262E9PQX1 116 aa12.82□□□□□ -0.36
IKBKB-228ENST00000523517 ZNF843Q8N446 348 aa12.82□□□□□ -0.36
IKBKB-228ENST00000523517 C11orf44Q8N8P7 122 aa12.82□□□□□ -0.36
IKBKB-228ENST00000523517 FAM208BQ5VWN6 2430 aa12.82□□□□□ -0.36
IKBKB-228ENST00000523517 TRBV10-2A0A0K0K1G8 114 aa12.81□□□□□ -0.36
IKBKB-228ENST00000523517 LINC00242Q5T6M2 205 aa12.81□□□□□ -0.36
IKBKB-228ENST00000523517 LINC00694P0DN24 101 aa12.81□□□□□ -0.36
IKBKB-228ENST00000523517 HERVK_113P63121 156 aa12.81□□□□□ -0.36
IKBKB-228ENST00000523517 NTN5Q8WTR8 489 aaPredicted RBP12.81□□□□□ -0.36
IKBKB-228ENST00000523517 IGLV5-39A0A0G2JS06 123 aa12.8□□□□□ -0.36
IKBKB-228ENST00000523517 DNAJC9-AS1A6NH13 148 aa12.8□□□□□ -0.36
IKBKB-228ENST00000523517 CCL24O00175 119 aa12.8□□□□□ -0.36
IKBKB-228ENST00000523517 CIDEAO60543 219 aa12.8□□□□□ -0.36
IKBKB-228ENST00000523517 RPL36AP83881 106 aaKnown RBP12.8□□□□□ -0.36
IKBKB-228ENST00000523517 DAND5Q8N907 189 aa12.8□□□□□ -0.36
IKBKB-228ENST00000523517 RPL36ALQ969Q0 106 aaKnown RBP12.8□□□□□ -0.36
IKBKB-228ENST00000523517 ZNF462Q96JM2 2506 aa12.8□□□□□ -0.36
IKBKB-228ENST00000523517 TRBV10-1A0A0K0K1A3 114 aa12.8□□□□□ -0.36
IKBKB-228ENST00000523517 K7EQD1 137 aa12.8□□□□□ -0.36
IKBKB-228ENST00000523517 COX6CP09669 75 aa12.8□□□□□ -0.36
IKBKB-228ENST00000523517 CKS1BP61024 79 aa12.8□□□□□ -0.36
IKBKB-228ENST00000523517 Q6ZTI0 123 aa12.8□□□□□ -0.36
IKBKB-228ENST00000523517 NAV2Q8IVL1 2488 aa12.79□□□□□ -0.36
IKBKB-228ENST00000523517 CIRBPQ14011 172 aaKnown RBP12.79□□□□□ -0.36
IKBKB-228ENST00000523517 NTM-AS1Q6ZSK4 140 aa12.79□□□□□ -0.36
IKBKB-228ENST00000523517 FAM19A3Q7Z5A8 133 aa12.79□□□□□ -0.36
IKBKB-228ENST00000523517 CSDC2Q9Y534 153 aaKnown RBP12.79□□□□□ -0.36
IKBKB-228ENST00000523517 PTPN13Q12923 2485 aa12.79□□□□□ -0.36
IKBKB-228ENST00000523517 DAZ2Q13117 558 aaKnown RBP12.78□□□□□ -0.36
IKBKB-228ENST00000523517 DAZ4Q86SG3 579 aaKnown RBP12.78□□□□□ -0.36
IKBKB-228ENST00000523517 DAZ3Q9NR90 486 aaKnown RBP12.78□□□□□ -0.36
IKBKB-228ENST00000523517 RPL13AP40429 203 aaKnown RBP12.78□□□□□ -0.36
IKBKB-228ENST00000523517 Q9H8V8 135 aa12.78□□□□□ -0.36
IKBKB-228ENST00000523517 TRAV4A0A0B4J268 109 aa12.77□□□□□ -0.36
IKBKB-228ENST00000523517 NDUFA7O95182 113 aa12.77□□□□□ -0.36
IKBKB-228ENST00000523517 LRRK2Q5S007 2527 aa12.77□□□□□ -0.37
IKBKB-228ENST00000523517 TRAV13-1A0A0B4J241 112 aa12.76□□□□□ -0.37
IKBKB-228ENST00000523517 H7C423 109 aa12.76□□□□□ -0.37
IKBKB-228ENST00000523517 GAGE12JA6NER3 117 aa12.76□□□□□ -0.37
IKBKB-228ENST00000523517 SMIM1B2RUZ4 78 aa12.76□□□□□ -0.37
IKBKB-228ENST00000523517 GAGE4Q13068 117 aa12.76□□□□□ -0.37
IKBKB-228ENST00000523517 GAGE5Q13069 117 aa12.76□□□□□ -0.37
IKBKB-228ENST00000523517 C2orf82Q6UX34 121 aa12.76□□□□□ -0.37
IKBKB-228ENST00000523517 TEX29Q8N6K0 151 aa12.76□□□□□ -0.37
IKBKB-228ENST00000523517 LINC00308Q8TCZ7 52 aa12.76□□□□□ -0.37
IKBKB-228ENST00000523517 CLEC2BQ92478 149 aa12.76□□□□□ -0.37
IKBKB-228ENST00000523517 TEX49A0A1B0GTD5 131 aa12.75□□□□□ -0.37
IKBKB-228ENST00000523517 ZNF625Q96I27 306 aaPredicted RBP12.74□□□□□ -0.37
IKBKB-228ENST00000523517 CITED2Q99967 270 aaPredicted RBP12.74□□□□□ -0.37
IKBKB-228ENST00000523517 NOP10Q9NPE3 64 aaKnown RBP12.74□□□□□ -0.37
IKBKB-228ENST00000523517 ESM1Q9NQ30 184 aa12.74□□□□□ -0.37
IKBKB-228ENST00000523517 CDC42SE2Q9NRR3 84 aa12.74□□□□□ -0.37
IKBKB-228ENST00000523517 UBR5O95071 2799 aaPredicted RBP12.74□□□□□ -0.37
IKBKB-228ENST00000523517 TEX15Q9BXT5 2789 aa12.74□□□□□ -0.37
IKBKB-228ENST00000523517 LST1O00453 97 aa12.74□□□□□ -0.37
IKBKB-228ENST00000523517 CENPEQ02224 2701 aa12.74□□□□□ -0.37
IKBKB-228ENST00000523517 UBE2WQ96B02 151 aa12.73□□□□□ -0.37
IKBKB-228ENST00000523517 H3BT86 120 aa12.73□□□□□ -0.37
IKBKB-228ENST00000523517 GIG44P09565 113 aaPredicted RBP12.73□□□□□ -0.37
IKBKB-228ENST00000523517 WFDC11Q8NEX6 87 aa12.73□□□□□ -0.37
IKBKB-228ENST00000523517 ZFYVE26Q68DK2 2539 aa12.72□□□□□ -0.37
IKBKB-228ENST00000523517 MYO9AB2RTY4 2548 aa12.72□□□□□ -0.37
IKBKB-228ENST00000523517 A0A0U1RRA0 63 aa12.71□□□□□ -0.37
IKBKB-228ENST00000523517 F5H768 121 aa12.71□□□□□ -0.37
IKBKB-228ENST00000523517 ABCA12Q86UK0 2595 aa12.71□□□□□ -0.38
IKBKB-228ENST00000523517 CMC4P56277 68 aaPredicted RBP12.71□□□□□ -0.38
IKBKB-228ENST00000523517 PRIMA1Q86XR5 153 aa12.7□□□□□ -0.38
IKBKB-228ENST00000523517 CITED1Q99966 193 aa12.7□□□□□ -0.38
IKBKB-228ENST00000523517 TRAV8-4A0A0B4J246 113 aa12.7□□□□□ -0.38
IKBKB-228ENST00000523517 PLAC8L1A1L4L8 177 aa12.7□□□□□ -0.38
IKBKB-228ENST00000523517 SOSTDC1Q6X4U4 206 aa12.7□□□□□ -0.38
IKBKB-228ENST00000523517 COPS9Q8WXC6 57 aa12.7□□□□□ -0.38
IKBKB-228ENST00000523517 TMEM243Q9BU79 118 aa12.7□□□□□ -0.38
IKBKB-228ENST00000523517 UBE2L6O14933 153 aa12.69□□□□□ -0.38
IKBKB-228ENST00000523517 C16orf74Q96GX8 76 aa12.69□□□□□ -0.38
IKBKB-228ENST00000523517 USP24Q9UPU5 2620 aa12.69□□□□□ -0.38
IKBKB-228ENST00000523517 AKAP9Q99996 3911 aa12.68□□□□□ -0.38
IKBKB-228ENST00000523517 TRGV2A0A075B6R0 118 aa12.68□□□□□ -0.38
IKBKB-228ENST00000523517 GAGE7O76087 117 aa12.68□□□□□ -0.38
IKBKB-228ENST00000523517 GAGE12FP0CL80 117 aa12.68□□□□□ -0.38
IKBKB-228ENST00000523517 GAGE12GP0CL81 117 aa12.68□□□□□ -0.38
IKBKB-228ENST00000523517 GAGE12IP0CL82 117 aa12.68□□□□□ -0.38
IKBKB-228ENST00000523517 MEIG1Q5JSS6 88 aa12.68□□□□□ -0.38
IKBKB-228ENST00000523517 HERV-K104P63124 156 aa12.67□□□□□ -0.38
IKBKB-228ENST00000523517 WFDC10AQ9H1F0 79 aa12.67□□□□□ -0.38
IKBKB-228ENST00000523517 RPL35AP18077 110 aaKnown RBP12.67□□□□□ -0.38
IKBKB-228ENST00000523517 LINC01006Q8NI28 216 aa12.66□□□□□ -0.38
IKBKB-228ENST00000523517 LOC100131303A0A0U1RQF7 123 aa12.66□□□□□ -0.38
IKBKB-228ENST00000523517 SNCGO76070 127 aa12.65□□□□□ -0.38
IKBKB-228ENST00000523517 C19orf73Q9NVV2 129 aa12.65□□□□□ -0.38
IKBKB-228ENST00000523517 TRBV6-4A0A1B0GX49 114 aa12.65□□□□□ -0.38
IKBKB-228ENST00000523517 COX7A2LO14548 114 aa12.64□□□□□ -0.39
IKBKB-228ENST00000523517 SHISA2Q6UWI4 295 aa12.64□□□□□ -0.39
IKBKB-228ENST00000523517 FAM110AQ9BQ89 295 aa12.64□□□□□ -0.39
IKBKB-228ENST00000523517 OVOL2Q9BRP0 275 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms