RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 GTSF1LQ9H1H1 148 aa18.3■□□□□ 0.52
COL13A1-214ENST00000522165 TRRAPQ9Y4A5 3859 aa18.29■□□□□ 0.52
COL13A1-214ENST00000522165 LINC00694P0DN24 101 aa18.29■□□□□ 0.52
COL13A1-214ENST00000522165 KRTAP24-1Q3LI83 254 aa18.29■□□□□ 0.52
COL13A1-214ENST00000522165 SCGB1D4Q6XE38 83 aa18.29■□□□□ 0.52
COL13A1-214ENST00000522165 TINCRA0A1B0GVN0 87 aa18.29■□□□□ 0.52
COL13A1-214ENST00000522165 DGAT2L7PQ6IED9 249 aa18.29■□□□□ 0.52
COL13A1-214ENST00000522165 PTTG1IPP53801 180 aa18.28■□□□□ 0.52
COL13A1-214ENST00000522165 DEFB135Q30KP9 77 aa18.28■□□□□ 0.52
COL13A1-214ENST00000522165 LGALS3P17931 250 aaKnown RBP18.27■□□□□ 0.51
COL13A1-214ENST00000522165 VAMP3Q15836 100 aa18.27■□□□□ 0.51
COL13A1-214ENST00000522165 CSDC2Q9Y534 153 aaKnown RBP18.27■□□□□ 0.51
COL13A1-214ENST00000522165 UBE2D1P51668 147 aa18.26■□□□□ 0.51
COL13A1-214ENST00000522165 C9orf118A6NHY6 69 aa18.25■□□□□ 0.51
COL13A1-214ENST00000522165 SMIM13P0DJ93 91 aa18.25■□□□□ 0.51
COL13A1-214ENST00000522165 UBE2V1Q13404 147 aa18.25■□□□□ 0.51
COL13A1-214ENST00000522165 IGHV3-64A0A075B6Q5 118 aa18.24■□□□□ 0.51
COL13A1-214ENST00000522165 A0A0J9YY99 117 aa18.24■□□□□ 0.51
COL13A1-214ENST00000522165 TMEM243Q9BU79 118 aa18.24■□□□□ 0.51
COL13A1-214ENST00000522165 RAB37Q96AX2 223 aa18.23■□□□□ 0.51
COL13A1-214ENST00000522165 NHP2Q9NX24 153 aaKnown RBP18.22■□□□□ 0.51
COL13A1-214ENST00000522165 NBEAL2Q6ZNJ1 2754 aa18.22■□□□□ 0.51
COL13A1-214ENST00000522165 LYRM9A8MSI8 78 aa18.22■□□□□ 0.51
COL13A1-214ENST00000522165 CCL25O15444 150 aa18.22■□□□□ 0.51
COL13A1-214ENST00000522165 SMAGPQ0VAQ4 97 aa18.22■□□□□ 0.51
COL13A1-214ENST00000522165 FAM222AQ5U5X8 452 aa18.22■□□□□ 0.51
COL13A1-214ENST00000522165 AMMECR1LQ6DCA0 310 aa18.21■□□□□ 0.51
COL13A1-214ENST00000522165 GEMIN7Q9H840 131 aaKnown RBP18.21■□□□□ 0.51
COL13A1-214ENST00000522165 K7ERJ3 54 aa18.2■□□□□ 0.5
COL13A1-214ENST00000522165 IGHV3-30-3P0DP02 117 aa18.2■□□□□ 0.5
COL13A1-214ENST00000522165 IGHV4-30-4P0DP06 118 aa18.2■□□□□ 0.5
COL13A1-214ENST00000522165 TIRAPP58753 221 aa18.2■□□□□ 0.5
COL13A1-214ENST00000522165 OR5A1Q8NGJ0 315 aa18.19■□□□□ 0.5
COL13A1-214ENST00000522165 H3BUT2 72 aa18.19■□□□□ 0.5
COL13A1-214ENST00000522165 UBE2L6O14933 153 aa18.19■□□□□ 0.5
COL13A1-214ENST00000522165 SRSF9Q13242 221 aaKnown RBP eCLIP18.19■□□□□ 0.5
COL13A1-214ENST00000522165 CDC42SE2Q9NRR3 84 aa18.19■□□□□ 0.5
COL13A1-214ENST00000522165 IGHV4-28A0A0C4DH34 117 aa18.18■□□□□ 0.5
COL13A1-214ENST00000522165 IGHV1-58A0A0C4DH39 117 aa18.18■□□□□ 0.5
COL13A1-214ENST00000522165 H7C423 109 aa18.18■□□□□ 0.5
COL13A1-214ENST00000522165 IGLV5-45A0A087WSX0 123 aa18.18■□□□□ 0.5
COL13A1-214ENST00000522165 TRAV8-3A0A0A6YYJ7 113 aa18.18■□□□□ 0.5
COL13A1-214ENST00000522165 SPANXB1Q9NS25 103 aaPredicted RBP18.18■□□□□ 0.5
COL13A1-214ENST00000522165 NAA38Q9BRA0 125 aaKnown RBP18.17■□□□□ 0.5
COL13A1-214ENST00000522165 DEFB4AO15263 64 aa18.16■□□□□ 0.5
COL13A1-214ENST00000522165 FAM19A3Q7Z5A8 133 aa18.16■□□□□ 0.5
COL13A1-214ENST00000522165 TRBV6-8A0A0A6YYG3 113 aa18.16■□□□□ 0.5
COL13A1-214ENST00000522165 C12orf74Q32Q52 190 aa18.16■□□□□ 0.5
COL13A1-214ENST00000522165 VSIG2Q96IQ7 327 aa18.16■□□□□ 0.5
COL13A1-214ENST00000522165 SPINK8P0C7L1 97 aa18.15■□□□□ 0.5
COL13A1-214ENST00000522165 OXLD1Q5BKU9 147 aa18.15■□□□□ 0.5
COL13A1-214ENST00000522165 CDKN2A-AS1Q9UH64 79 aa18.15■□□□□ 0.5
COL13A1-214ENST00000522165 MIFP14174 115 aa18.14■□□□□ 0.5
COL13A1-214ENST00000522165 LINC00242Q5T6M2 205 aa18.14■□□□□ 0.5
COL13A1-214ENST00000522165 C3orf56Q8N813 242 aa18.14■□□□□ 0.5
COL13A1-214ENST00000522165 Q8NAQ8 132 aa18.14■□□□□ 0.5
COL13A1-214ENST00000522165 TMEM101Q96IK0 257 aa18.14■□□□□ 0.5
COL13A1-214ENST00000522165 PRO0255Q9UI72 69 aa18.14■□□□□ 0.5
COL13A1-214ENST00000522165 A0A1B0GWB2 263 aa18.14■□□□□ 0.49
COL13A1-214ENST00000522165 GYPEP15421 78 aa18.14■□□□□ 0.49
COL13A1-214ENST00000522165 COX6A2Q02221 97 aa18.14■□□□□ 0.49
COL13A1-214ENST00000522165 RNF183Q96D59 192 aa18.14■□□□□ 0.49
COL13A1-214ENST00000522165 HERVK_113P63121 156 aa18.13■□□□□ 0.49
COL13A1-214ENST00000522165 C10orf126Q8N4M7 172 aa18.13■□□□□ 0.49
COL13A1-214ENST00000522165 FBN1P35555 2871 aaKnown RBP18.12■□□□□ 0.49
COL13A1-214ENST00000522165 TRAV13-1A0A0B4J241 112 aa18.11■□□□□ 0.49
COL13A1-214ENST00000522165 SHISA2Q6UWI4 295 aa18.11■□□□□ 0.49
COL13A1-214ENST00000522165 A0A1W2PPM0 123 aa18.11■□□□□ 0.49
COL13A1-214ENST00000522165 CYSRT1A8MQ03 144 aa18.11■□□□□ 0.49
COL13A1-214ENST00000522165 KRTAP10-11P60412 298 aa18.11■□□□□ 0.49
COL13A1-214ENST00000522165 GAGE6Q13070 117 aa18.11■□□□□ 0.49
COL13A1-214ENST00000522165 ATP6V0E2Q8NHE4 81 aa18.11■□□□□ 0.49
COL13A1-214ENST00000522165 TMEM238LA0A1B0GVL6 79 aa18.1■□□□□ 0.49
COL13A1-214ENST00000522165 A6NJY4 79 aa18.1■□□□□ 0.49
COL13A1-214ENST00000522165 IGHV3-30P01768 117 aa18.1■□□□□ 0.49
COL13A1-214ENST00000522165 IGHV3-30-5P0DP03 117 aa18.1■□□□□ 0.49
COL13A1-214ENST00000522165 SAMD5Q5TGI4 173 aa18.1■□□□□ 0.49
COL13A1-214ENST00000522165 A0A0J9YXY3 114 aa18.09■□□□□ 0.49
COL13A1-214ENST00000522165 A8MZ25 164 aa18.08■□□□□ 0.49
COL13A1-214ENST00000522165 DAD1P61803 113 aa18.08■□□□□ 0.49
COL13A1-214ENST00000522165 CHCHD5Q9BSY4 110 aa18.08■□□□□ 0.49
COL13A1-214ENST00000522165 NDUFA12Q9UI09 145 aa18.08■□□□□ 0.49
COL13A1-214ENST00000522165 PRIMA1Q86XR5 153 aa18.08■□□□□ 0.48
COL13A1-214ENST00000522165 CELA1Q9UNI1 258 aa18.08■□□□□ 0.48
COL13A1-214ENST00000522165 GAGE10A6NGK3 116 aa18.07■□□□□ 0.48
COL13A1-214ENST00000522165 PAX4O43316 350 aa18.07■□□□□ 0.48
COL13A1-214ENST00000522165 IGLL5B9A064 214 aa18.07■□□□□ 0.48
COL13A1-214ENST00000522165 PCP4P48539 62 aa18.06■□□□□ 0.48
COL13A1-214ENST00000522165 EGFEM1PQ0D2K5 195 aa18.06■□□□□ 0.48
COL13A1-214ENST00000522165 ZFAND6Q6FIF0 208 aa18.06■□□□□ 0.48
COL13A1-214ENST00000522165 BAHCC1Q9P281 2608 aa18.06■□□□□ 0.48
COL13A1-214ENST00000522165 IGLV5-39A0A0G2JS06 123 aa18.05■□□□□ 0.48
COL13A1-214ENST00000522165 FABP2P12104 132 aa18.05■□□□□ 0.48
COL13A1-214ENST00000522165 GTF2H5Q6ZYL4 71 aa18.05■□□□□ 0.48
COL13A1-214ENST00000522165 IGLV4-60A0A075B6I1 120 aa18.04■□□□□ 0.48
COL13A1-214ENST00000522165 TMEM238C9JI98 176 aa18.04■□□□□ 0.48
COL13A1-214ENST00000522165 K7EP34 96 aa18.04■□□□□ 0.48
COL13A1-214ENST00000522165 SPART-AS1P0CW21 52 aa18.03■□□□□ 0.48
COL13A1-214ENST00000522165 STAB1Q9NY15 2570 aa18.03■□□□□ 0.48
COL13A1-214ENST00000522165 ATP5G1P05496 136 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms