RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 C11orf44Q8N8P7 122 aa8.8□□□□□ -1
SPIDR-217ENST00000522117 LINC00308Q8TCZ7 52 aa8.8□□□□□ -1
SPIDR-217ENST00000522117 LRBAP50851 2863 aa8.8□□□□□ -1
SPIDR-217ENST00000522117 SS18Q15532 418 aa8.79□□□□□ -1
SPIDR-217ENST00000522117 NUP37Q8NFH4 326 aa8.79□□□□□ -1
SPIDR-217ENST00000522117 OBSCN-AS1Q96MR7 158 aa8.79□□□□□ -1
SPIDR-217ENST00000522117 F5H697 171 aa8.79□□□□□ -1
SPIDR-217ENST00000522117 RPL11P62913 178 aaKnown RBP8.79□□□□□ -1
SPIDR-217ENST00000522117 ASH1LQ9NR48 2969 aaKnown RBP8.79□□□□□ -1
SPIDR-217ENST00000522117 LINC00474Q9P2X8 69 aa8.78□□□□□ -1
SPIDR-217ENST00000522117 IGHV3-49A0A0A0MS15 119 aa8.78□□□□□ -1
SPIDR-217ENST00000522117 KNCNA6PVL3 124 aa8.78□□□□□ -1
SPIDR-217ENST00000522117 PAX4O43316 350 aa8.78□□□□□ -1
SPIDR-217ENST00000522117 C1orf158Q8N1D5 194 aa8.78□□□□□ -1
SPIDR-217ENST00000522117 TRAV23DV6A0A075B6W5 121 aa8.77□□□□□ -1.01
SPIDR-217ENST00000522117 SOSTDC1Q6X4U4 206 aa8.77□□□□□ -1.01
SPIDR-217ENST00000522117 ITLN2Q8WWU7 325 aaPredicted RBP8.77□□□□□ -1.01
SPIDR-217ENST00000522117 DCHS2Q6V1P9 2916 aa8.76□□□□□ -1.01
SPIDR-217ENST00000522117 COX7A1P24310 79 aa8.76□□□□□ -1.01
SPIDR-217ENST00000522117 NPBQ8NG41 125 aa8.76□□□□□ -1.01
SPIDR-217ENST00000522117 HOXD3P31249 432 aaPredicted RBP8.75□□□□□ -1.01
SPIDR-217ENST00000522117 DEFB1P60022 68 aa8.75□□□□□ -1.01
SPIDR-217ENST00000522117 WFDC9Q8NEX5 89 aa8.75□□□□□ -1.01
SPIDR-217ENST00000522117 POLEQ07864 2286 aa8.75□□□□□ -1.01
SPIDR-217ENST00000522117 CSMD1Q96PZ7 3565 aa8.75□□□□□ -1.01
SPIDR-217ENST00000522117 VPS13CQ709C8 3753 aa8.75□□□□□ -1.01
SPIDR-217ENST00000522117 M0QY20 66 aa8.75□□□□□ -1.01
SPIDR-217ENST00000522117 NDUFA1O15239 70 aa8.75□□□□□ -1.01
SPIDR-217ENST00000522117 ROS1P08922 2347 aa8.75□□□□□ -1.01
SPIDR-217ENST00000522117 CD28P10747 220 aa8.74□□□□□ -1.01
SPIDR-217ENST00000522117 COL6A6A6NMZ7 2263 aa8.74□□□□□ -1.01
SPIDR-217ENST00000522117 RNASE13Q5GAN3 156 aaKnown RBP8.74□□□□□ -1.01
SPIDR-217ENST00000522117 LY6G5BQ8NDX9 201 aa8.74□□□□□ -1.01
SPIDR-217ENST00000522117 APOC4P55056 127 aa8.74□□□□□ -1.01
SPIDR-217ENST00000522117 CCL17Q92583 94 aa8.74□□□□□ -1.01
SPIDR-217ENST00000522117 KAAG1Q9UBP8 84 aa8.73□□□□□ -1.01
SPIDR-217ENST00000522117 FAM74A4Q5TZK3 123 aa8.72□□□□□ -1.01
SPIDR-217ENST00000522117 TRBV7-6A0A0J9YX20 115 aa8.72□□□□□ -1.01
SPIDR-217ENST00000522117 Q6ZRU5 148 aa8.72□□□□□ -1.01
SPIDR-217ENST00000522117 C22orf34Q6ZV56 151 aa8.72□□□□□ -1.01
SPIDR-217ENST00000522117 ZNF625Q96I27 306 aaPredicted RBP8.72□□□□□ -1.01
SPIDR-217ENST00000522117 TACC2O95359 2948 aa8.71□□□□□ -1.01
SPIDR-217ENST00000522117 CCKP06307 115 aa8.71□□□□□ -1.01
SPIDR-217ENST00000522117 SNRPD3P62318 126 aaKnown RBP8.71□□□□□ -1.01
SPIDR-217ENST00000522117 RBM12B-AS1Q9P1G2 102 aa8.71□□□□□ -1.01
SPIDR-217ENST00000522117 A0A087WYN8 130 aa8.71□□□□□ -1.02
SPIDR-217ENST00000522117 KLKP1Q107X0 134 aa8.71□□□□□ -1.02
SPIDR-217ENST00000522117 NCR3O14931 201 aa8.7□□□□□ -1.02
SPIDR-217ENST00000522117 K7EMT4 169 aa8.7□□□□□ -1.02
SPIDR-217ENST00000522117 C15orf32Q32M92 178 aa8.7□□□□□ -1.02
SPIDR-217ENST00000522117 CSMD2Q7Z408 3487 aa8.7□□□□□ -1.02
SPIDR-217ENST00000522117 CFAP46Q8IYW2 2715 aa8.69□□□□□ -1.02
SPIDR-217ENST00000522117 TRAV7A0A075B6U4 112 aa8.69□□□□□ -1.02
SPIDR-217ENST00000522117 ENHOQ6UWT2 76 aa8.69□□□□□ -1.02
SPIDR-217ENST00000522117 ZFYVE26Q68DK2 2539 aa8.68□□□□□ -1.02
SPIDR-217ENST00000522117 SAA4P35542 130 aa8.68□□□□□ -1.02
SPIDR-217ENST00000522117 ATP5EP2Q5VTU8 51 aa8.68□□□□□ -1.02
SPIDR-217ENST00000522117 SEM1Q6ZVN7 128 aa8.68□□□□□ -1.02
SPIDR-217ENST00000522117 PRR15Q8IV56 129 aa8.68□□□□□ -1.02
SPIDR-217ENST00000522117 RMI2Q96E14 147 aa8.68□□□□□ -1.02
SPIDR-217ENST00000522117 F6UB75 175 aa8.68□□□□□ -1.02
SPIDR-217ENST00000522117 SOCS3O14543 225 aa8.68□□□□□ -1.02
SPIDR-217ENST00000522117 CCDC140Q96MF4 163 aa8.68□□□□□ -1.02
SPIDR-217ENST00000522117 Q9H8V8 135 aa8.68□□□□□ -1.02
SPIDR-217ENST00000522117 CDKN2A-AS1Q9UH64 79 aa8.68□□□□□ -1.02
SPIDR-217ENST00000522117 PKD1L2Q7Z442 2459 aa8.68□□□□□ -1.02
SPIDR-217ENST00000522117 F8WEM9 126 aa8.67□□□□□ -1.02
SPIDR-217ENST00000522117 CLEC19AQ6UXS0 136 aa8.67□□□□□ -1.02
SPIDR-217ENST00000522117 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.67□□□□□ -1.02
SPIDR-217ENST00000522117 SNURFQ9Y675 71 aa8.67□□□□□ -1.02
SPIDR-217ENST00000522117 RBM3P98179 157 aaKnown RBP8.67□□□□□ -1.02
SPIDR-217ENST00000522117 PRR26Q8N8Z3 221 aa8.67□□□□□ -1.02
SPIDR-217ENST00000522117 COPS9Q8WXC6 57 aa8.67□□□□□ -1.02
SPIDR-217ENST00000522117 BPESC1Q9GZL8 116 aa8.67□□□□□ -1.02
SPIDR-217ENST00000522117 ACACBO00763 2458 aa8.67□□□□□ -1.02
SPIDR-217ENST00000522117 MAP1AP78559 2803 aaPredicted RBP8.66□□□□□ -1.02
SPIDR-217ENST00000522117 CACNA1AO00555 2505 aa8.66□□□□□ -1.02
SPIDR-217ENST00000522117 OVOL2Q9BRP0 275 aa8.66□□□□□ -1.02
SPIDR-217ENST00000522117 BCE1O60756 84 aa8.65□□□□□ -1.02
SPIDR-217ENST00000522117 S100A7L2Q5SY68 101 aa8.65□□□□□ -1.02
SPIDR-217ENST00000522117 UTP20O75691 2785 aaKnown RBP8.65□□□□□ -1.02
SPIDR-217ENST00000522117 SPTAN1Q13813 2472 aaKnown RBP8.65□□□□□ -1.02
SPIDR-217ENST00000522117 IGLV5-45A0A087WSX0 123 aa8.65□□□□□ -1.03
SPIDR-217ENST00000522117 IGHV7-81A0A0B4J1V7 117 aa8.65□□□□□ -1.03
SPIDR-217ENST00000522117 TRBV10-3A0A0K0K1G6 114 aa8.65□□□□□ -1.03
SPIDR-217ENST00000522117 FAM229BQ4G0N7 80 aa8.65□□□□□ -1.03
SPIDR-217ENST00000522117 IGFL3Q6UXB1 125 aa8.65□□□□□ -1.03
SPIDR-217ENST00000522117 DPM3Q9P2X0 92 aa8.65□□□□□ -1.03
SPIDR-217ENST00000522117 CRYBG3Q68DQ2 2970 aa8.64□□□□□ -1.03
SPIDR-217ENST00000522117 IGLV5-39A0A0G2JS06 123 aa8.64□□□□□ -1.03
SPIDR-217ENST00000522117 KLLNB2CW77 178 aa8.64□□□□□ -1.03
SPIDR-217ENST00000522117 CFHR3Q02985 330 aa8.64□□□□□ -1.03
SPIDR-217ENST00000522117 PIK3CD-AS1Q5SR53 167 aa8.64□□□□□ -1.03
SPIDR-217ENST00000522117 ZFHX3Q15911 3703 aa8.64□□□□□ -1.03
SPIDR-217ENST00000522117 IGKV2-29A2NJV5 120 aaPredicted RBP8.63□□□□□ -1.03
SPIDR-217ENST00000522117 MIR7-3HGQ8N6C7 128 aa8.63□□□□□ -1.03
SPIDR-217ENST00000522117 LINC00337Q8N6G1 96 aa8.63□□□□□ -1.03
SPIDR-217ENST00000522117 KLK9Q2XQG4 91 aa8.63□□□□□ -1.03
SPIDR-217ENST00000522117 KLK9Q9UKQ9 250 aa8.63□□□□□ -1.03
SPIDR-217ENST00000522117 WNK2Q9Y3S1 2297 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 1003.8 ms