RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 SPANXA1Q9NS26 97 aa16.3■□□□□ 0.2
PVT1-212ENST00000521951 IBA57-AS1B1ANH7 110 aa16.29■□□□□ 0.2
PVT1-212ENST00000521951 HSBP1O75506 76 aa16.29■□□□□ 0.2
PVT1-212ENST00000521951 CDC42SE2Q9NRR3 84 aa16.29■□□□□ 0.2
PVT1-212ENST00000521951 PYGO1Q9Y3Y4 419 aa16.29■□□□□ 0.2
PVT1-212ENST00000521951 HBDP02042 147 aa16.28■□□□□ 0.2
PVT1-212ENST00000521951 LINC00269Q8N2A0 174 aa16.28■□□□□ 0.2
PVT1-212ENST00000521951 FAM104AQ969W3 186 aa16.28■□□□□ 0.2
PVT1-212ENST00000521951 NDUFA6P56556 154 aa16.27■□□□□ 0.2
PVT1-212ENST00000521951 ZNF664Q8N3J9 261 aa16.27■□□□□ 0.2
PVT1-212ENST00000521951 OPRPNQ99935 248 aaPredicted RBP16.27■□□□□ 0.2
PVT1-212ENST00000521951 KMT2CQ8NEZ4 4911 aaKnown RBP16.27■□□□□ 0.19
PVT1-212ENST00000521951 LINC01549A6NIU2 74 aa16.26■□□□□ 0.19
PVT1-212ENST00000521951 IGIPA6NJ69 53 aa16.26■□□□□ 0.19
PVT1-212ENST00000521951 FAM19A2Q8N3H0 131 aa16.26■□□□□ 0.19
PVT1-212ENST00000521951 ENHOQ6UWT2 76 aa16.25■□□□□ 0.19
PVT1-212ENST00000521951 Q6ZUT4 128 aa16.25■□□□□ 0.19
PVT1-212ENST00000521951 UBE2WQ96B02 151 aa16.25■□□□□ 0.19
PVT1-212ENST00000521951 SCGB3A1Q96QR1 104 aa16.25■□□□□ 0.19
PVT1-212ENST00000521951 PRR34Q9NV39 138 aa16.25■□□□□ 0.19
PVT1-212ENST00000521951 HYDINQ4G0P3 5121 aa16.25■□□□□ 0.19
PVT1-212ENST00000521951 MRPS36P82909 103 aaKnown RBP16.24■□□□□ 0.19
PVT1-212ENST00000521951 COA6Q5JTJ3 125 aaKnown RBP16.24■□□□□ 0.19
PVT1-212ENST00000521951 CLPSL2Q6UWE3 100 aa16.24■□□□□ 0.19
PVT1-212ENST00000521951 ERASQ7Z444 233 aa16.24■□□□□ 0.19
PVT1-212ENST00000521951 IGLV4-3A0A075B6K6 122 aa16.24■□□□□ 0.19
PVT1-212ENST00000521951 REG3AQ06141 175 aa16.24■□□□□ 0.19
PVT1-212ENST00000521951 RNASE13Q5GAN3 156 aaKnown RBP16.24■□□□□ 0.19
PVT1-212ENST00000521951 PDZD11Q5EBL8 140 aa16.23■□□□□ 0.19
PVT1-212ENST00000521951 TIMM17AQ99595 171 aa16.23■□□□□ 0.19
PVT1-212ENST00000521951 CRPP02741 224 aa16.22■□□□□ 0.19
PVT1-212ENST00000521951 Q9HAA7 133 aa16.22■□□□□ 0.19
PVT1-212ENST00000521951 NPSP0C0P6 89 aa16.21■□□□□ 0.19
PVT1-212ENST00000521951 TMEM141Q96I45 108 aa16.21■□□□□ 0.19
PVT1-212ENST00000521951 TRAV8-3A0A0A6YYJ7 113 aa16.2■□□□□ 0.18
PVT1-212ENST00000521951 IGKV3OR2-268A0A0C4DH90 116 aa16.2■□□□□ 0.18
PVT1-212ENST00000521951 MIAQ16674 131 aa16.19■□□□□ 0.18
PVT1-212ENST00000521951 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.18■□□□□ 0.18
PVT1-212ENST00000521951 ZC2HC1BQ5TFG8 222 aa16.18■□□□□ 0.18
PVT1-212ENST00000521951 C6orf223Q8N319 242 aa16.18■□□□□ 0.18
PVT1-212ENST00000521951 RYR2Q92736 4967 aa16.17■□□□□ 0.18
PVT1-212ENST00000521951 Q6ZN92 141 aa16.17■□□□□ 0.18
PVT1-212ENST00000521951 VCX2Q9H322 139 aa16.17■□□□□ 0.18
PVT1-212ENST00000521951 PAPPA-AS1Q5QFB9 102 aa16.16■□□□□ 0.18
PVT1-212ENST00000521951 C1orf134Q5TEV5 83 aa16.16■□□□□ 0.18
PVT1-212ENST00000521951 AMELXQ99217 191 aa16.16■□□□□ 0.18
PVT1-212ENST00000521951 LINC00959A0A1B0GUT2 108 aa16.15■□□□□ 0.18
PVT1-212ENST00000521951 ATP5LO75964 103 aa16.15■□□□□ 0.18
PVT1-212ENST00000521951 TEX43Q6ZNM6 134 aa16.15■□□□□ 0.18
PVT1-212ENST00000521951 LINC00173Q6ZV60 143 aa16.15■□□□□ 0.18
PVT1-212ENST00000521951 IGLV10-54A0A075B6I4 117 aa16.14■□□□□ 0.18
PVT1-212ENST00000521951 TRAV8-4A0A0B4J246 113 aa16.14■□□□□ 0.18
PVT1-212ENST00000521951 NFE4Q86UQ8 179 aa16.14■□□□□ 0.18
PVT1-212ENST00000521951 IGKV2D-24A0A075B6R9 120 aa16.14■□□□□ 0.17
PVT1-212ENST00000521951 TRAV13-1A0A0B4J241 112 aa16.14■□□□□ 0.17
PVT1-212ENST00000521951 LEPROTL1O95214 131 aa16.14■□□□□ 0.17
PVT1-212ENST00000521951 S100A6P06703 90 aa16.14■□□□□ 0.17
PVT1-212ENST00000521951 BAALCQ8WXS3 180 aa16.14■□□□□ 0.17
PVT1-212ENST00000521951 IFITM10A6NMD0 228 aa16.13■□□□□ 0.17
PVT1-212ENST00000521951 FABP4P15090 132 aa16.13■□□□□ 0.17
PVT1-212ENST00000521951 RMI2Q96E14 147 aa16.13■□□□□ 0.17
PVT1-212ENST00000521951 C1orf43Q9BWL3 253 aa16.13■□□□□ 0.17
PVT1-212ENST00000521951 DNAH2Q9P225 4427 aa16.12■□□□□ 0.17
PVT1-212ENST00000521951 Q6ZRN7 208 aaPredicted RBP16.12■□□□□ 0.17
PVT1-212ENST00000521951 IFI27L1Q96BM0 104 aa16.12■□□□□ 0.17
PVT1-212ENST00000521951 SS18Q15532 418 aa16.11■□□□□ 0.17
PVT1-212ENST00000521951 C2orf88Q9BSF0 95 aa16.11■□□□□ 0.17
PVT1-212ENST00000521951 KRTAP26-1Q6PEX3 210 aa16.1■□□□□ 0.17
PVT1-212ENST00000521951 CHCHD10Q8WYQ3 142 aaPredicted RBP16.1■□□□□ 0.17
PVT1-212ENST00000521951 TM2D2Q9BX73 214 aa16.1■□□□□ 0.17
PVT1-212ENST00000521951 CCL25O15444 150 aa16.09■□□□□ 0.17
PVT1-212ENST00000521951 PMVKQ15126 192 aa16.09■□□□□ 0.17
PVT1-212ENST00000521951 CST9LQ9H4G1 147 aa16.09■□□□□ 0.17
PVT1-212ENST00000521951 HSPB8Q9UJY1 196 aa16.09■□□□□ 0.17
PVT1-212ENST00000521951 PRSS29PA6NIE9 313 aa16.09■□□□□ 0.17
PVT1-212ENST00000521951 UBE2D1P51668 147 aa16.09■□□□□ 0.17
PVT1-212ENST00000521951 COX11Q9Y6N1 276 aa16.09■□□□□ 0.17
PVT1-212ENST00000521951 DNAH10Q8IVF4 4471 aa16.08■□□□□ 0.16
PVT1-212ENST00000521951 PRSS1P07477 247 aa16.08■□□□□ 0.16
PVT1-212ENST00000521951 SNRPEP62304 92 aaKnown RBP16.08■□□□□ 0.16
PVT1-212ENST00000521951 RTL8CO15255 209 aa16.07■□□□□ 0.16
PVT1-212ENST00000521951 XCL1P47992 114 aa16.07■□□□□ 0.16
PVT1-212ENST00000521951 HIST3H2BBQ8N257 126 aa16.07■□□□□ 0.16
PVT1-212ENST00000521951 GAGE12HA6NDE8 117 aa16.06■□□□□ 0.16
PVT1-212ENST00000521951 PSCAO43653 123 aa16.05■□□□□ 0.16
PVT1-212ENST00000521951 MAPKAPK5-AS1Q8N8E1 139 aa16.05■□□□□ 0.16
PVT1-212ENST00000521951 PACRGQ96M98 296 aaPredicted RBP16.05■□□□□ 0.16
PVT1-212ENST00000521951 LINC00242Q5T6M2 205 aa16.04■□□□□ 0.16
PVT1-212ENST00000521951 TMA7Q9Y2S6 64 aaKnown RBP16.04■□□□□ 0.16
PVT1-212ENST00000521951 FRAS1Q86XX4 4008 aa16.04■□□□□ 0.16
PVT1-212ENST00000521951 C5orf52A6NGY3 159 aa16.04■□□□□ 0.16
PVT1-212ENST00000521951 CD164L2Q6UWJ8 174 aa16.04■□□□□ 0.16
PVT1-212ENST00000521951 FOXI1Q12951 378 aa16.03■□□□□ 0.16
PVT1-212ENST00000521951 FAM19A3Q7Z5A8 133 aa16.03■□□□□ 0.16
PVT1-212ENST00000521951 A0A0J9YXV3 536 aa16.02■□□□□ 0.15
PVT1-212ENST00000521951 COX6A2Q02221 97 aa16.02■□□□□ 0.15
PVT1-212ENST00000521951 TRAV12-1A0A0B4J245 112 aa16.01■□□□□ 0.15
PVT1-212ENST00000521951 S100A2P29034 98 aa16.01■□□□□ 0.15
PVT1-212ENST00000521951 MAP1LC3CQ9BXW4 147 aa16.01■□□□□ 0.15
PVT1-212ENST00000521951 RYR3Q15413 4870 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms