RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 KRTAP10-1P60331 282 aa12.1□□□□□ -0.47
SREK1-207ENST00000520058 RHEBQ15382 184 aa12.1□□□□□ -0.47
SREK1-207ENST00000520058 SS18Q15532 418 aa12.1□□□□□ -0.47
SREK1-207ENST00000520058 CFAP161Q6P656 301 aa12.1□□□□□ -0.47
SREK1-207ENST00000520058 ZNF664Q8N3J9 261 aa12.09□□□□□ -0.47
SREK1-207ENST00000520058 MAP1LC3AQ9H492 121 aa12.09□□□□□ -0.47
SREK1-207ENST00000520058 CARHSP1Q9Y2V2 147 aaKnown RBP12.09□□□□□ -0.47
SREK1-207ENST00000520058 CSDC2Q9Y534 153 aaKnown RBP12.09□□□□□ -0.47
SREK1-207ENST00000520058 COX19Q49B96 90 aa12.08□□□□□ -0.48
SREK1-207ENST00000520058 C10orf91Q5T1B1 145 aa12.08□□□□□ -0.48
SREK1-207ENST00000520058 CDC42SE2Q9NRR3 84 aa12.08□□□□□ -0.48
SREK1-207ENST00000520058 AP5S1Q9NUS5 200 aa12.08□□□□□ -0.48
SREK1-207ENST00000520058 GAGE12HA6NDE8 117 aa12.07□□□□□ -0.48
SREK1-207ENST00000520058 KRTAP26-1Q6PEX3 210 aa12.07□□□□□ -0.48
SREK1-207ENST00000520058 CHCHD10Q8WYQ3 142 aaPredicted RBP12.07□□□□□ -0.48
SREK1-207ENST00000520058 TIMM21Q9BVV7 248 aa12.07□□□□□ -0.48
SREK1-207ENST00000520058 RPS10P5Q9NQ39 176 aa12.07□□□□□ -0.48
SREK1-207ENST00000520058 CCL25O15444 150 aa12.06□□□□□ -0.48
SREK1-207ENST00000520058 hDV102S1A0JD36 115 aa12.05□□□□□ -0.48
SREK1-207ENST00000520058 UBE2D4Q9Y2X8 147 aa12.05□□□□□ -0.48
SREK1-207ENST00000520058 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.04□□□□□ -0.48
SREK1-207ENST00000520058 LINC00959A0A1B0GUT2 108 aa12.04□□□□□ -0.48
SREK1-207ENST00000520058 PRSS47A8MTI9 375 aa12.04□□□□□ -0.48
SREK1-207ENST00000520058 LOC389332A0A1B0GUA5 103 aa12.03□□□□□ -0.48
SREK1-207ENST00000520058 C1orf196B1AJZ1 125 aa12.03□□□□□ -0.48
SREK1-207ENST00000520058 SNAPINO95295 136 aa12.03□□□□□ -0.48
SREK1-207ENST00000520058 APOC3P02656 99 aa12.03□□□□□ -0.48
SREK1-207ENST00000520058 PRSS1P07477 247 aa12.03□□□□□ -0.48
SREK1-207ENST00000520058 XCL1P47992 114 aa12.03□□□□□ -0.48
SREK1-207ENST00000520058 SVBPQ8N300 66 aa12.03□□□□□ -0.48
SREK1-207ENST00000520058 SPANXA1Q9NS26 97 aa12.03□□□□□ -0.48
SREK1-207ENST00000520058 DNAH5Q8TE73 4624 aa12.02□□□□□ -0.48
SREK1-207ENST00000520058 K7EMI3 77 aa12.02□□□□□ -0.49
SREK1-207ENST00000520058 G0S2P27469 103 aa12.02□□□□□ -0.49
SREK1-207ENST00000520058 Q8N1X5 172 aa12.02□□□□□ -0.49
SREK1-207ENST00000520058 Q8N8P6 123 aa12.02□□□□□ -0.49
SREK1-207ENST00000520058 LRP1BQ9NZR2 4599 aa12.02□□□□□ -0.49
SREK1-207ENST00000520058 MT-ND6P03923 174 aa12.01□□□□□ -0.49
SREK1-207ENST00000520058 IFI27P40305 119 aaPredicted RBP12.01□□□□□ -0.49
SREK1-207ENST00000520058 GNB1LQ9BYB4 327 aa12.01□□□□□ -0.49
SREK1-207ENST00000520058 NXT2Q9NPJ8 142 aaKnown RBP12.01□□□□□ -0.49
SREK1-207ENST00000520058 XGP55808 180 aa12□□□□□ -0.49
SREK1-207ENST00000520058 ORMDL2Q53FV1 153 aa12□□□□□ -0.49
SREK1-207ENST00000520058 CD164L2Q6UWJ8 174 aa12□□□□□ -0.49
SREK1-207ENST00000520058 RPL39P62891 51 aaKnown RBP11.99□□□□□ -0.49
SREK1-207ENST00000520058 HERC2O95714 4834 aa11.99□□□□□ -0.49
SREK1-207ENST00000520058 TRAV13-1A0A0B4J241 112 aa11.98□□□□□ -0.49
SREK1-207ENST00000520058 CNBPP62633 177 aaKnown RBP11.98□□□□□ -0.49
SREK1-207ENST00000520058 FOXI1Q12951 378 aa11.98□□□□□ -0.49
SREK1-207ENST00000520058 C9orf163Q8N9P6 203 aa11.98□□□□□ -0.49
SREK1-207ENST00000520058 IGHV1-58A0A0C4DH39 117 aa11.97□□□□□ -0.49
SREK1-207ENST00000520058 MRPS36P82909 103 aaKnown RBP11.97□□□□□ -0.49
SREK1-207ENST00000520058 LINC01620Q4KN68 170 aa11.97□□□□□ -0.49
SREK1-207ENST00000520058 Q6ZUT4 128 aa11.97□□□□□ -0.49
SREK1-207ENST00000520058 CYSLTR1Q9Y271 337 aa11.97□□□□□ -0.49
SREK1-207ENST00000520058 RYR1P21817 5038 aa11.97□□□□□ -0.49
SREK1-207ENST00000520058 EPM2AB3EWF7 344 aa11.96□□□□□ -0.49
SREK1-207ENST00000520058 MALP21145 153 aa11.96□□□□□ -0.49
SREK1-207ENST00000520058 KIAA1644Q3SXP7 199 aa11.96□□□□□ -0.49
SREK1-207ENST00000520058 RNASE13Q5GAN3 156 aaKnown RBP11.96□□□□□ -0.49
SREK1-207ENST00000520058 Q6ZSA8 131 aa11.96□□□□□ -0.49
SREK1-207ENST00000520058 PYGO1Q9Y3Y4 419 aa11.96□□□□□ -0.49
SREK1-207ENST00000520058 FAM229AH3BQW9 127 aa11.95□□□□□ -0.5
SREK1-207ENST00000520058 Q6ZN92 141 aa11.95□□□□□ -0.5
SREK1-207ENST00000520058 C15orf56Q8N910 161 aa11.95□□□□□ -0.5
SREK1-207ENST00000520058 PRSS3P2Q8NHM4 247 aa11.95□□□□□ -0.5
SREK1-207ENST00000520058 IGHV3-64A0A075B6Q5 118 aa11.94□□□□□ -0.5
SREK1-207ENST00000520058 GVQW2A0A096LPI5 108 aaPredicted RBP11.94□□□□□ -0.5
SREK1-207ENST00000520058 IFITM10A6NMD0 228 aa11.94□□□□□ -0.5
SREK1-207ENST00000520058 ZNF561-AS1K7EIQ3 104 aa11.94□□□□□ -0.5
SREK1-207ENST00000520058 COX7A2LO14548 114 aa11.94□□□□□ -0.5
SREK1-207ENST00000520058 APOMO95445 188 aa11.94□□□□□ -0.5
SREK1-207ENST00000520058 FABP9Q0Z7S8 132 aa11.94□□□□□ -0.5
SREK1-207ENST00000520058 FAM30AQ9NZY2 134 aa11.94□□□□□ -0.5
SREK1-207ENST00000520058 PKIGQ9Y2B9 76 aa11.94□□□□□ -0.5
SREK1-207ENST00000520058 HIGD2BQ4VC39 106 aa11.93□□□□□ -0.5
SREK1-207ENST00000520058 PAPPA-AS1Q5QFB9 102 aa11.93□□□□□ -0.5
SREK1-207ENST00000520058 C2orf66Q6UXQ4 117 aa11.93□□□□□ -0.5
SREK1-207ENST00000520058 C2orf88Q9BSF0 95 aa11.93□□□□□ -0.5
SREK1-207ENST00000520058 MRPL18Q9H0U6 180 aaKnown RBP11.93□□□□□ -0.5
SREK1-207ENST00000520058 LINC01549A6NIU2 74 aa11.92□□□□□ -0.5
SREK1-207ENST00000520058 TEX43Q6ZNM6 134 aa11.92□□□□□ -0.5
SREK1-207ENST00000520058 TMEM141Q96I45 108 aa11.92□□□□□ -0.5
SREK1-207ENST00000520058 SMR3BP02814 79 aaPredicted RBP11.91□□□□□ -0.5
SREK1-207ENST00000520058 NPSP0C0P6 89 aa11.91□□□□□ -0.5
SREK1-207ENST00000520058 CHAC1Q9BUX1 264 aa11.91□□□□□ -0.5
SREK1-207ENST00000520058 TRAPPC1Q9Y5R8 145 aa11.91□□□□□ -0.5
SREK1-207ENST00000520058 APOBP04114 4563 aaKnown RBP11.9□□□□□ -0.5
SREK1-207ENST00000520058 HAMPP81172 84 aa11.9□□□□□ -0.5
SREK1-207ENST00000520058 OPRPNQ99935 248 aaPredicted RBP11.9□□□□□ -0.5
SREK1-207ENST00000520058 ALKBH7Q9BT30 221 aaPredicted RBP11.9□□□□□ -0.5
SREK1-207ENST00000520058 VCX2Q9H322 139 aa11.9□□□□□ -0.5
SREK1-207ENST00000520058 SMCO4Q9NRQ5 59 aa11.9□□□□□ -0.5
SREK1-207ENST00000520058 TGIF2-C20orf24A0A0A6YYL0 155 aa11.89□□□□□ -0.51
SREK1-207ENST00000520058 Q5VSD8 79 aa11.89□□□□□ -0.51
SREK1-207ENST00000520058 DPH3Q96FX2 82 aa11.89□□□□□ -0.51
SREK1-207ENST00000520058 HSPG2P98160 4391 aa11.88□□□□□ -0.51
SREK1-207ENST00000520058 IGLV4-3A0A075B6K6 122 aa11.88□□□□□ -0.51
SREK1-207ENST00000520058 FA2HQ7L5A8 372 aa11.88□□□□□ -0.51
SREK1-207ENST00000520058 SCXQ7RTU7 201 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms