RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 SPINK13Q1W4C9 94 aa3.67□□□□□ -1.82
SDC2-204ENST00000519914 ZNF843Q8N446 348 aa3.67□□□□□ -1.82
SDC2-204ENST00000519914 C10orf126Q8N4M7 172 aa3.67□□□□□ -1.82
SDC2-204ENST00000519914 SLC25A29Q8N8R3 303 aa3.67□□□□□ -1.82
SDC2-204ENST00000519914 FAM104AQ969W3 186 aa3.67□□□□□ -1.82
SDC2-204ENST00000519914 LINC00526Q96FQ7 95 aa3.67□□□□□ -1.82
SDC2-204ENST00000519914 HIST1H4GQ99525 98 aa3.67□□□□□ -1.82
SDC2-204ENST00000519914 PRO0628Q9UI54 55 aa3.67□□□□□ -1.82
SDC2-204ENST00000519914 SORL1Q92673 2214 aa3.66□□□□□ -1.82
SDC2-204ENST00000519914 IGLV4-3A0A075B6K6 122 aa3.66□□□□□ -1.82
SDC2-204ENST00000519914 TRAV12-2A0A075B6T6 113 aa3.66□□□□□ -1.82
SDC2-204ENST00000519914 TRBV7-7A0A0K0K1E9 115 aa3.66□□□□□ -1.82
SDC2-204ENST00000519914 K7ERJ3 54 aa3.66□□□□□ -1.82
SDC2-204ENST00000519914 RS1O15537 224 aa3.66□□□□□ -1.82
SDC2-204ENST00000519914 CRLF1O75462 422 aa3.66□□□□□ -1.82
SDC2-204ENST00000519914 IGHV3-30P01768 117 aa3.66□□□□□ -1.82
SDC2-204ENST00000519914 IGHV3-30-5P0DP03 117 aa3.66□□□□□ -1.82
SDC2-204ENST00000519914 ZNF22P17026 224 aaPredicted RBP3.66□□□□□ -1.82
SDC2-204ENST00000519914 RPL13AP40429 203 aaKnown RBP3.66□□□□□ -1.82
SDC2-204ENST00000519914 UBE2D3P61077 147 aa3.66□□□□□ -1.82
SDC2-204ENST00000519914 TMEM258P61165 79 aa3.66□□□□□ -1.82
SDC2-204ENST00000519914 UBE2D2P62837 147 aa3.66□□□□□ -1.82
SDC2-204ENST00000519914 RPL39P62891 51 aaKnown RBP3.66□□□□□ -1.82
SDC2-204ENST00000519914 MRPS36P82909 103 aaKnown RBP3.66□□□□□ -1.82
SDC2-204ENST00000519914 ZNF415Q09FC8 603 aa3.66□□□□□ -1.82
SDC2-204ENST00000519914 ZNF56Q15929 161 aa3.66□□□□□ -1.82
SDC2-204ENST00000519914 DEFB114Q30KQ6 69 aa3.66□□□□□ -1.82
SDC2-204ENST00000519914 C9orf153Q5TBE3 101 aa3.66□□□□□ -1.82
SDC2-204ENST00000519914 FAM19A5Q7Z5A7 132 aaPredicted RBP3.66□□□□□ -1.82
SDC2-204ENST00000519914 FAM19A3Q7Z5A8 133 aa3.66□□□□□ -1.82
SDC2-204ENST00000519914 C3orf22Q8N5N4 141 aa3.66□□□□□ -1.82
SDC2-204ENST00000519914 C15orf53Q8NAA6 179 aa3.66□□□□□ -1.82
SDC2-204ENST00000519914 C11orf72Q8NBR9 251 aa3.66□□□□□ -1.82
SDC2-204ENST00000519914 COPS9Q8WXC6 57 aa3.66□□□□□ -1.82
SDC2-204ENST00000519914 PLEKHB2Q96CS7 222 aa3.66□□□□□ -1.82
SDC2-204ENST00000519914 Q96MF0 132 aa3.66□□□□□ -1.82
SDC2-204ENST00000519914 MAP6D1Q9H9H5 199 aa3.66□□□□□ -1.82
SDC2-204ENST00000519914 TRAV8-4A0A0B4J246 113 aa3.65□□□□□ -1.83
SDC2-204ENST00000519914 F5H697 171 aa3.65□□□□□ -1.83
SDC2-204ENST00000519914 J3QQQ9 107 aa3.65□□□□□ -1.83
SDC2-204ENST00000519914 IGHV3-53P01767 116 aa3.65□□□□□ -1.83
SDC2-204ENST00000519914 MALP21145 153 aa3.65□□□□□ -1.83
SDC2-204ENST00000519914 CXCL5P42830 114 aa3.65□□□□□ -1.83
SDC2-204ENST00000519914 TSPEAR-AS2P59090 65 aa3.65□□□□□ -1.83
SDC2-204ENST00000519914 DEFB131AP59861 70 aa3.65□□□□□ -1.83
SDC2-204ENST00000519914 TMEM61Q8N0U2 210 aa3.65□□□□□ -1.83
SDC2-204ENST00000519914 KIR2DL5BQ8NHK3 375 aa3.65□□□□□ -1.83
SDC2-204ENST00000519914 NAA38Q9BRA0 125 aaKnown RBP3.65□□□□□ -1.83
SDC2-204ENST00000519914 CHCHD7Q9BUK0 85 aa3.65□□□□□ -1.83
SDC2-204ENST00000519914 TIMM21Q9BVV7 248 aa3.65□□□□□ -1.83
SDC2-204ENST00000519914 ANKRD17O75179 2603 aaKnown RBP3.65□□□□□ -1.83
SDC2-204ENST00000519914 ZNF469Q96JG9 3925 aaPredicted RBP3.64□□□□□ -1.83
SDC2-204ENST00000519914 ACACBO00763 2458 aa3.64□□□□□ -1.83
SDC2-204ENST00000519914 COL12A1Q99715 3063 aa3.64□□□□□ -1.83
SDC2-204ENST00000519914 CFAP46Q8IYW2 2715 aa3.64□□□□□ -1.83
SDC2-204ENST00000519914 IGLV5-45A0A087WSX0 123 aa3.64□□□□□ -1.83
SDC2-204ENST00000519914 A0A0B4J2C4 111 aa3.64□□□□□ -1.83
SDC2-204ENST00000519914 TINCRA0A1B0GVN0 87 aa3.64□□□□□ -1.83
SDC2-204ENST00000519914 KNCNA6PVL3 124 aa3.64□□□□□ -1.83
SDC2-204ENST00000519914 KRTAP29-1A8MX34 341 aaPredicted RBP3.64□□□□□ -1.83
SDC2-204ENST00000519914 INSP01308 110 aa3.64□□□□□ -1.83
SDC2-204ENST00000519914 LINC00694P0DN24 101 aa3.64□□□□□ -1.83
SDC2-204ENST00000519914 CRYGAP11844 174 aa3.64□□□□□ -1.83
SDC2-204ENST00000519914 CMC4P56277 68 aaPredicted RBP3.64□□□□□ -1.83
SDC2-204ENST00000519914 KRTAP10-9P60411 292 aa3.64□□□□□ -1.83
SDC2-204ENST00000519914 TMEM170BQ5T4T1 132 aa3.64□□□□□ -1.83
SDC2-204ENST00000519914 FAM74A4Q5TZK3 123 aa3.64□□□□□ -1.83
SDC2-204ENST00000519914 GAGE2AQ6NT46 116 aa3.64□□□□□ -1.83
SDC2-204ENST00000519914 Q6ZSV7 163 aa3.64□□□□□ -1.83
SDC2-204ENST00000519914 C18orf65Q6ZTR6 163 aa3.64□□□□□ -1.83
SDC2-204ENST00000519914 NDUFA11Q86Y39 141 aa3.64□□□□□ -1.83
SDC2-204ENST00000519914 LINC01587Q99440 93 aa3.64□□□□□ -1.83
SDC2-204ENST00000519914 C16orf95Q9H693 158 aa3.64□□□□□ -1.83
SDC2-204ENST00000519914 IGSF10Q6WRI0 2623 aa3.64□□□□□ -1.83
SDC2-204ENST00000519914 ZNF462Q96JM2 2506 aa3.63□□□□□ -1.83
SDC2-204ENST00000519914 CELSR1Q9NYQ6 3014 aa3.63□□□□□ -1.83
SDC2-204ENST00000519914 USP9YO00507 2555 aaPredicted RBP3.63□□□□□ -1.83
SDC2-204ENST00000519914 IGHV1-58A0A0C4DH39 117 aa3.63□□□□□ -1.83
SDC2-204ENST00000519914 TRBV10-1A0A0K0K1A3 114 aa3.63□□□□□ -1.83
SDC2-204ENST00000519914 NDUFC2-KCTD14E9PQ53 114 aa3.63□□□□□ -1.83
SDC2-204ENST00000519914 TIMM17BO60830 172 aa3.63□□□□□ -1.83
SDC2-204ENST00000519914 IGKV3-20P01619 116 aa3.63□□□□□ -1.83
SDC2-204ENST00000519914 TRACP01848 142 aa3.63□□□□□ -1.83
SDC2-204ENST00000519914 CFC1BP0CG36 223 aa3.63□□□□□ -1.83
SDC2-204ENST00000519914 CFC1P0CG37 223 aa3.63□□□□□ -1.83
SDC2-204ENST00000519914 LGALS3P17931 250 aaKnown RBP3.63□□□□□ -1.83
SDC2-204ENST00000519914 PSMB2P49721 201 aa3.63□□□□□ -1.83
SDC2-204ENST00000519914 TIRAPP58753 221 aa3.63□□□□□ -1.83
SDC2-204ENST00000519914 ODF3L2Q3SX64 289 aa3.63□□□□□ -1.83
SDC2-204ENST00000519914 SCGB1D4Q6XE38 83 aa3.63□□□□□ -1.83
SDC2-204ENST00000519914 MAPK1IP1LQ8NDC0 245 aa3.63□□□□□ -1.83
SDC2-204ENST00000519914 KLHL30-AS1Q8NEE0 82 aa3.63□□□□□ -1.83
SDC2-204ENST00000519914 DYNLRB2Q8TF09 96 aa3.63□□□□□ -1.83
SDC2-204ENST00000519914 UBE2D4Q9Y2X8 147 aa3.63□□□□□ -1.83
SDC2-204ENST00000519914 SELENOKQ9Y6D0 94 aa3.63□□□□□ -1.83
SDC2-204ENST00000519914 V9GYY9 64 aa3.63□□□□□ -1.83
SDC2-204ENST00000519914 NBPF19A0A087WUL8 3843 aa3.62□□□□□ -1.83
SDC2-204ENST00000519914 FBN2P35556 2912 aa3.62□□□□□ -1.83
SDC2-204ENST00000519914 CREBBPQ92793 2442 aa3.62□□□□□ -1.83
SDC2-204ENST00000519914 A0A0J9YXY3 114 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms