RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 TIMM17BO60830 172 aa13.35□□□□□ -0.27
SDC2-202ENST00000518385 TRBV10-2A0A0K0K1G8 114 aa13.34□□□□□ -0.27
SDC2-202ENST00000518385 COX6CP09669 75 aa13.34□□□□□ -0.27
SDC2-202ENST00000518385 MRPS36P82909 103 aaKnown RBP13.34□□□□□ -0.27
SDC2-202ENST00000518385 CITED1Q99966 193 aa13.34□□□□□ -0.27
SDC2-202ENST00000518385 IGLV4-3A0A075B6K6 122 aa13.33□□□□□ -0.28
SDC2-202ENST00000518385 TRAV12-2A0A075B6T6 113 aa13.33□□□□□ -0.28
SDC2-202ENST00000518385 KNCNA6PVL3 124 aa13.33□□□□□ -0.28
SDC2-202ENST00000518385 C9JAW5 83 aa13.33□□□□□ -0.28
SDC2-202ENST00000518385 H3BT86 120 aa13.33□□□□□ -0.28
SDC2-202ENST00000518385 SPRY2O43597 315 aa13.33□□□□□ -0.28
SDC2-202ENST00000518385 LINC01620Q4KN68 170 aa13.33□□□□□ -0.28
SDC2-202ENST00000518385 LINC00467Q9BRT7 94 aa13.33□□□□□ -0.28
SDC2-202ENST00000518385 MUC4Q99102 2169 aa13.33□□□□□ -0.28
SDC2-202ENST00000518385 JMJD1CQ15652 2540 aa13.33□□□□□ -0.28
SDC2-202ENST00000518385 TEP1Q99973 2627 aaKnown RBP13.33□□□□□ -0.28
SDC2-202ENST00000518385 A0A0J9YXY3 114 aa13.32□□□□□ -0.28
SDC2-202ENST00000518385 IFITM1P13164 125 aa13.32□□□□□ -0.28
SDC2-202ENST00000518385 MUSTN1Q8IVN3 82 aa13.32□□□□□ -0.28
SDC2-202ENST00000518385 EMP1P54849 157 aa13.32□□□□□ -0.28
SDC2-202ENST00000518385 Q8N1Y9 231 aa13.32□□□□□ -0.28
SDC2-202ENST00000518385 JPT2Q9H910 190 aa13.32□□□□□ -0.28
SDC2-202ENST00000518385 TRAV26-1A0A087WT03 109 aa13.31□□□□□ -0.28
SDC2-202ENST00000518385 FAM110AQ9BQ89 295 aa13.31□□□□□ -0.28
SDC2-202ENST00000518385 TIMM21Q9BVV7 248 aa13.31□□□□□ -0.28
SDC2-202ENST00000518385 IGHV1-58A0A0C4DH39 117 aa13.3□□□□□ -0.28
SDC2-202ENST00000518385 SNCGO76070 127 aa13.3□□□□□ -0.28
SDC2-202ENST00000518385 KRTAP24-1Q3LI83 254 aa13.3□□□□□ -0.28
SDC2-202ENST00000518385 FAM74A4Q5TZK3 123 aa13.3□□□□□ -0.28
SDC2-202ENST00000518385 MAST4O15021 2626 aa13.29□□□□□ -0.28
SDC2-202ENST00000518385 FAM240AA0A1B0GVK7 77 aa13.29□□□□□ -0.28
SDC2-202ENST00000518385 TINCRA0A1B0GVN0 87 aa13.29□□□□□ -0.28
SDC2-202ENST00000518385 Q1RN00 199 aa13.29□□□□□ -0.28
SDC2-202ENST00000518385 PRIMA1Q86XR5 153 aa13.29□□□□□ -0.28
SDC2-202ENST00000518385 COPS9Q8WXC6 57 aa13.29□□□□□ -0.28
SDC2-202ENST00000518385 ANAPC13Q9BS18 74 aa13.29□□□□□ -0.28
SDC2-202ENST00000518385 SFTA2Q6UW10 78 aa13.28□□□□□ -0.28
SDC2-202ENST00000518385 DNAJC30Q96LL9 226 aa13.28□□□□□ -0.28
SDC2-202ENST00000518385 IGHV3-30-3P0DP02 117 aa13.28□□□□□ -0.28
SDC2-202ENST00000518385 GAGE2BQ13066 116 aa13.28□□□□□ -0.28
SDC2-202ENST00000518385 ODF3L2Q3SX64 289 aa13.28□□□□□ -0.28
SDC2-202ENST00000518385 GAGE2EQ4V326 116 aa13.28□□□□□ -0.28
SDC2-202ENST00000518385 GAGE2DQ9UEU5 116 aa13.28□□□□□ -0.28
SDC2-202ENST00000518385 A0A0J9YXV3 536 aa13.27□□□□□ -0.29
SDC2-202ENST00000518385 RBMY1BA6NDE4 496 aaKnown RBP13.27□□□□□ -0.29
SDC2-202ENST00000518385 RBMY1EA6NEQ0 496 aaKnown RBP13.27□□□□□ -0.29
SDC2-202ENST00000518385 RBMY1DP0C7P1 496 aaKnown RBP13.27□□□□□ -0.29
SDC2-202ENST00000518385 GAGE5Q13069 117 aa13.27□□□□□ -0.29
SDC2-202ENST00000518385 GAGE6Q13070 117 aa13.27□□□□□ -0.29
SDC2-202ENST00000518385 MIAQ16674 131 aa13.27□□□□□ -0.29
SDC2-202ENST00000518385 TRAV8-4A0A0B4J246 113 aa13.26□□□□□ -0.29
SDC2-202ENST00000518385 INSP01308 110 aa13.26□□□□□ -0.29
SDC2-202ENST00000518385 IGLV1-51P01701 117 aa13.26□□□□□ -0.29
SDC2-202ENST00000518385 DEFB121Q5J5C9 76 aa13.26□□□□□ -0.29
SDC2-202ENST00000518385 STHQ8IWL8 128 aa13.26□□□□□ -0.29
SDC2-202ENST00000518385 UBE2WQ96B02 151 aa13.26□□□□□ -0.29
SDC2-202ENST00000518385 PPDPFQ9H3Y8 114 aa13.26□□□□□ -0.29
SDC2-202ENST00000518385 LITAFQ99732 161 aa13.25□□□□□ -0.29
SDC2-202ENST00000518385 WNK1Q9H4A3 2382 aa13.25□□□□□ -0.29
SDC2-202ENST00000518385 ICOSQ9Y6W8 199 aa13.24□□□□□ -0.29
SDC2-202ENST00000518385 EIF4EBP3O60516 100 aaPredicted RBP13.24□□□□□ -0.29
SDC2-202ENST00000518385 PF4P02776 101 aa13.24□□□□□ -0.29
SDC2-202ENST00000518385 RBMY1A1P0DJD3 496 aaKnown RBP13.24□□□□□ -0.29
SDC2-202ENST00000518385 RBMY1CP0DJD4 496 aa13.24□□□□□ -0.29
SDC2-202ENST00000518385 ZNF415Q09FC8 603 aa13.24□□□□□ -0.29
SDC2-202ENST00000518385 RBMY1FQ15415 496 aaKnown RBP13.24□□□□□ -0.29
SDC2-202ENST00000518385 NTN5Q8WTR8 489 aaPredicted RBP13.24□□□□□ -0.29
SDC2-202ENST00000518385 SPXQ9BT56 116 aa13.24□□□□□ -0.29
SDC2-202ENST00000518385 TNFRSF18Q9Y5U5 241 aa13.24□□□□□ -0.29
SDC2-202ENST00000518385 LINC00482Q8N8I6 264 aa13.23□□□□□ -0.29
SDC2-202ENST00000518385 VSIG2Q96IQ7 327 aa13.23□□□□□ -0.29
SDC2-202ENST00000518385 NDUFA12Q9UI09 145 aa13.23□□□□□ -0.29
SDC2-202ENST00000518385 SORL1Q92673 2214 aa13.22□□□□□ -0.29
SDC2-202ENST00000518385 TIRAPP58753 221 aa13.22□□□□□ -0.29
SDC2-202ENST00000518385 BEAN1Q3B7T3 259 aa13.22□□□□□ -0.29
SDC2-202ENST00000518385 TRIAP1O43715 76 aa13.21□□□□□ -0.29
SDC2-202ENST00000518385 C2orf82Q6UX34 121 aa13.21□□□□□ -0.29
SDC2-202ENST00000518385 LINC01587Q99440 93 aa13.21□□□□□ -0.29
SDC2-202ENST00000518385 ACYP1P07311 99 aa13.2□□□□□ -0.3
SDC2-202ENST00000518385 CIRBPQ14011 172 aaKnown RBP13.2□□□□□ -0.3
SDC2-202ENST00000518385 TTC32Q5I0X7 151 aa13.2□□□□□ -0.3
SDC2-202ENST00000518385 IGLV5-45A0A087WSX0 123 aa13.2□□□□□ -0.3
SDC2-202ENST00000518385 LST1O00453 97 aa13.2□□□□□ -0.3
SDC2-202ENST00000518385 OPRPNQ99935 248 aaPredicted RBP13.2□□□□□ -0.3
SDC2-202ENST00000518385 ATRQ13535 2644 aa13.18□□□□□ -0.3
SDC2-202ENST00000518385 NDUFA1O15239 70 aa13.18□□□□□ -0.3
SDC2-202ENST00000518385 NDUFV3P56181 108 aaKnown RBP13.18□□□□□ -0.3
SDC2-202ENST00000518385 FAM19A3Q7Z5A8 133 aa13.17□□□□□ -0.3
SDC2-202ENST00000518385 UBE2D4Q9Y2X8 147 aa13.17□□□□□ -0.3
SDC2-202ENST00000518385 H7C2G1 150 aa13.16□□□□□ -0.3
SDC2-202ENST00000518385 C11orf72Q8NBR9 251 aa13.16□□□□□ -0.3
SDC2-202ENST00000518385 TENM1Q9UKZ4 2725 aa13.16□□□□□ -0.3
SDC2-202ENST00000518385 H7C423 109 aa13.15□□□□□ -0.3
SDC2-202ENST00000518385 PRSS2P07478 247 aa13.15□□□□□ -0.3
SDC2-202ENST00000518385 HTN1P15515 57 aa13.15□□□□□ -0.3
SDC2-202ENST00000518385 FAM104AQ969W3 186 aa13.15□□□□□ -0.3
SDC2-202ENST00000518385 GAGE12JA6NER3 117 aa13.15□□□□□ -0.3
SDC2-202ENST00000518385 GAGE7O76087 117 aa13.15□□□□□ -0.3
SDC2-202ENST00000518385 GAGE12FP0CL80 117 aa13.15□□□□□ -0.3
SDC2-202ENST00000518385 GAGE12GP0CL81 117 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 256.5 ms