RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 ADAMTSL4-AS1Q5T5F5 129 aa4.9□□□□□ -1.63
CPNE3-203ENST00000517490 FAM222AQ5U5X8 452 aa4.9□□□□□ -1.63
CPNE3-203ENST00000517490 JMJD7-PLA2G4BH0Y9G9 81 aa4.9□□□□□ -1.63
CPNE3-203ENST00000517490 ARHGAP32A7KAX9 2087 aa4.9□□□□□ -1.63
CPNE3-203ENST00000517490 IGHV4-30-2A0A087WSY4 118 aa4.89□□□□□ -1.63
CPNE3-203ENST00000517490 PROK1P58294 105 aa4.89□□□□□ -1.63
CPNE3-203ENST00000517490 COX7CP15954 63 aa4.89□□□□□ -1.63
CPNE3-203ENST00000517490 CFHR3Q02985 330 aa4.89□□□□□ -1.63
CPNE3-203ENST00000517490 C14orf132Q9NPU4 83 aa4.89□□□□□ -1.63
CPNE3-203ENST00000517490 ZNF580Q9UK33 172 aa4.89□□□□□ -1.63
CPNE3-203ENST00000517490 RPL35AP18077 110 aaKnown RBP4.89□□□□□ -1.63
CPNE3-203ENST00000517490 NOP10Q9NPE3 64 aaKnown RBP4.89□□□□□ -1.63
CPNE3-203ENST00000517490 TTC28Q96AY4 2481 aa4.88□□□□□ -1.63
CPNE3-203ENST00000517490 hADV29S1A0JD25 119 aa4.88□□□□□ -1.63
CPNE3-203ENST00000517490 FHL3Q13643 280 aa4.88□□□□□ -1.63
CPNE3-203ENST00000517490 DEFB136Q30KP8 78 aa4.88□□□□□ -1.63
CPNE3-203ENST00000517490 PSMB8P28062 276 aa4.88□□□□□ -1.63
CPNE3-203ENST00000517490 SDIM1Q6ZPB5 146 aa4.88□□□□□ -1.63
CPNE3-203ENST00000517490 LINC00526Q96FQ7 95 aa4.88□□□□□ -1.63
CPNE3-203ENST00000517490 ZFHX2Q9C0A1 2572 aaPredicted RBP4.88□□□□□ -1.63
CPNE3-203ENST00000517490 UBE2DNLQ8IWF7 75 aa4.88□□□□□ -1.63
CPNE3-203ENST00000517490 RPL18AQ02543 176 aaKnown RBP4.87□□□□□ -1.63
CPNE3-203ENST00000517490 Q6ZSV7 163 aa4.87□□□□□ -1.63
CPNE3-203ENST00000517490 C5orf38Q86SI9 138 aa4.87□□□□□ -1.63
CPNE3-203ENST00000517490 CHCHD7Q9BUK0 85 aa4.87□□□□□ -1.63
CPNE3-203ENST00000517490 MAP6D1Q9H9H5 199 aa4.87□□□□□ -1.63
CPNE3-203ENST00000517490 MKI67P46013 3256 aaKnown RBP4.87□□□□□ -1.63
CPNE3-203ENST00000517490 PRORYQ9H606 182 aa4.87□□□□□ -1.63
CPNE3-203ENST00000517490 HTN3P15516 51 aa4.87□□□□□ -1.63
CPNE3-203ENST00000517490 HAMPP81172 84 aa4.87□□□□□ -1.63
CPNE3-203ENST00000517490 ATP5EP2Q5VTU8 51 aa4.87□□□□□ -1.63
CPNE3-203ENST00000517490 C16orf74Q96GX8 76 aa4.87□□□□□ -1.63
CPNE3-203ENST00000517490 TMEM258P61165 79 aa4.86□□□□□ -1.63
CPNE3-203ENST00000517490 SERP2Q8N6R1 65 aa4.86□□□□□ -1.63
CPNE3-203ENST00000517490 DSCR8Q96T75 97 aa4.86□□□□□ -1.63
CPNE3-203ENST00000517490 X6R8D5 127 aa4.86□□□□□ -1.63
CPNE3-203ENST00000517490 DEFB130BP0DP73 79 aa4.86□□□□□ -1.63
CPNE3-203ENST00000517490 DEFB130AP0DP74 79 aa4.86□□□□□ -1.63
CPNE3-203ENST00000517490 A0A0A0MQY5 61 aa4.86□□□□□ -1.63
CPNE3-203ENST00000517490 IBA57-AS1B1ANH7 110 aa4.86□□□□□ -1.63
CPNE3-203ENST00000517490 TMEM256-PLSCR3K7ERE1 68 aa4.86□□□□□ -1.63
CPNE3-203ENST00000517490 LINC00694P0DN24 101 aa4.86□□□□□ -1.63
CPNE3-203ENST00000517490 XCL1P47992 114 aa4.85□□□□□ -1.63
CPNE3-203ENST00000517490 LINC00242Q5T6M2 205 aa4.85□□□□□ -1.63
CPNE3-203ENST00000517490 Q6JHZ5 121 aa4.85□□□□□ -1.63
CPNE3-203ENST00000517490 ZNF575Q86XF7 245 aa4.85□□□□□ -1.63
CPNE3-203ENST00000517490 C4orf3Q8WVX3 66 aa4.85□□□□□ -1.63
CPNE3-203ENST00000517490 SMIM9A6NGZ8 99 aa4.85□□□□□ -1.63
CPNE3-203ENST00000517490 H3BQ85 93 aa4.85□□□□□ -1.63
CPNE3-203ENST00000517490 CDSNQ15517 529 aa4.85□□□□□ -1.63
CPNE3-203ENST00000517490 SMIM1B2RUZ4 78 aa4.84□□□□□ -1.63
CPNE3-203ENST00000517490 RPL28P46779 137 aaKnown RBP4.84□□□□□ -1.63
CPNE3-203ENST00000517490 DEFB121Q5J5C9 76 aa4.84□□□□□ -1.63
CPNE3-203ENST00000517490 MAPK1IP1LQ8NDC0 245 aa4.84□□□□□ -1.63
CPNE3-203ENST00000517490 NHLRC4P0CG21 123 aaPredicted RBP4.84□□□□□ -1.63
CPNE3-203ENST00000517490 Q6ZTI0 123 aa4.84□□□□□ -1.64
CPNE3-203ENST00000517490 PTPRQQ9UMZ3 2332 aa4.83□□□□□ -1.64
CPNE3-203ENST00000517490 C10orf99Q6UWK7 81 aa4.83□□□□□ -1.64
CPNE3-203ENST00000517490 PIEZO2Q9H5I5 2752 aa4.83□□□□□ -1.64
CPNE3-203ENST00000517490 LAMA2P24043 3122 aaKnown RBP4.83□□□□□ -1.64
CPNE3-203ENST00000517490 F8WEM9 126 aa4.83□□□□□ -1.64
CPNE3-203ENST00000517490 NCR3O14931 201 aa4.83□□□□□ -1.64
CPNE3-203ENST00000517490 SMIM11BQ8TCY0 68 aa4.83□□□□□ -1.64
CPNE3-203ENST00000517490 COX6A2Q02221 97 aa4.83□□□□□ -1.64
CPNE3-203ENST00000517490 LITAFQ99732 161 aa4.83□□□□□ -1.64
CPNE3-203ENST00000517490 CDC42SE2Q9NRR3 84 aa4.83□□□□□ -1.64
CPNE3-203ENST00000517490 NOTCH3Q9UM47 2321 aa4.83□□□□□ -1.64
CPNE3-203ENST00000517490 PRRC2CQ9Y520 2896 aaKnown RBP4.83□□□□□ -1.64
CPNE3-203ENST00000517490 CCL24O00175 119 aa4.82□□□□□ -1.64
CPNE3-203ENST00000517490 PSCAO43653 123 aa4.82□□□□□ -1.64
CPNE3-203ENST00000517490 RBM3P98179 157 aaKnown RBP4.82□□□□□ -1.64
CPNE3-203ENST00000517490 DEFB114Q30KQ6 69 aa4.82□□□□□ -1.64
CPNE3-203ENST00000517490 IGLV5-39A0A0G2JS06 123 aa4.82□□□□□ -1.64
CPNE3-203ENST00000517490 PDE6GP18545 87 aa4.82□□□□□ -1.64
CPNE3-203ENST00000517490 TRAV23DV6A0A075B6W5 121 aa4.82□□□□□ -1.64
CPNE3-203ENST00000517490 C19orf84I3L1E1 186 aa4.82□□□□□ -1.64
CPNE3-203ENST00000517490 TLN1Q9Y490 2541 aaKnown RBP4.82□□□□□ -1.64
CPNE3-203ENST00000517490 CUL9Q8IWT3 2517 aa4.82□□□□□ -1.64
CPNE3-203ENST00000517490 BEAN1Q3B7T3 259 aa4.81□□□□□ -1.64
CPNE3-203ENST00000517490 CLPSL2Q6UWE3 100 aa4.81□□□□□ -1.64
CPNE3-203ENST00000517490 SLPIP03973 132 aa4.81□□□□□ -1.64
CPNE3-203ENST00000517490 UPK3BQ9BT76 320 aa4.81□□□□□ -1.64
CPNE3-203ENST00000517490 COL27A1Q8IZC6 1860 aaPredicted RBP4.81□□□□□ -1.64
CPNE3-203ENST00000517490 IGLV5-45A0A087WSX0 123 aa4.81□□□□□ -1.64
CPNE3-203ENST00000517490 TRBV6-4A0A1B0GX49 114 aa4.81□□□□□ -1.64
CPNE3-203ENST00000517490 PRM2P04554 102 aa4.81□□□□□ -1.64
CPNE3-203ENST00000517490 PRRC2AP48634 2157 aaKnown RBP4.81□□□□□ -1.64
CPNE3-203ENST00000517490 A0A1W2PPR1 153 aa4.81□□□□□ -1.64
CPNE3-203ENST00000517490 ANGP03950 147 aaKnown RBP4.81□□□□□ -1.64
CPNE3-203ENST00000517490 Q6ZSN1 163 aa4.81□□□□□ -1.64
CPNE3-203ENST00000517490 CCL18P55774 89 aa4.8□□□□□ -1.64
CPNE3-203ENST00000517490 Q6YL49 198 aa4.8□□□□□ -1.64
CPNE3-203ENST00000517490 C20orf197Q8N268 126 aa4.8□□□□□ -1.64
CPNE3-203ENST00000517490 LINC01600Q96MT4 127 aa4.8□□□□□ -1.64
CPNE3-203ENST00000517490 FAM236DA0A1B0GTK5 79 aa4.8□□□□□ -1.64
CPNE3-203ENST00000517490 FAM236CP0DP71 79 aa4.8□□□□□ -1.64
CPNE3-203ENST00000517490 DOPEY1Q5JWR5 2465 aa4.8□□□□□ -1.64
CPNE3-203ENST00000517490 NACAE9PAV3 2078 aa4.8□□□□□ -1.64
CPNE3-203ENST00000517490 TRBV6-8A0A0A6YYG3 113 aa4.8□□□□□ -1.64
CPNE3-203ENST00000517490 NDUFC2-KCTD14E9PQ53 114 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms