RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 COX17Q14061 63 aa0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 COL5A1-AS1Q5SY13 56 aa0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 NCMAPQ5T1S8 102 aa0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 CFAP126Q5VTH2 177 aa0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 BAGE2Q86Y30 109 aa0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 PRO1854Q9UHT4 67 aa0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 PRDM15P57071 1507 aaPredicted RBP0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 HMGXB3Q12766 1538 aa0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 APCP25054 2843 aa0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 CC2D2AQ9P2K1 1620 aa0.31□□□□□ -2.36
RN7SKP88-201ENST00000516847 TOPAZ1Q8N9V7 1692 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 ZNF609O15014 1411 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 TROQ12816 1431 aaPredicted RBP0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 NSD3Q9BZ95 1437 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 CHD1O14646 1710 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 ABCC10Q5T3U5 1492 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 MAGI1Q96QZ7 1491 aaPredicted RBP0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 FYCO1Q9BQS8 1478 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 SHANK2Q9UPX8 1470 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 KDM3BQ7LBC6 1761 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 PLXNB2O15031 1838 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 SBF2Q86WG5 1849 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 WNK3Q9BYP7 1800 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 CTXND1A0A1B0GTU2 59 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 hADV29S1A0JD25 119 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 CRYM-AS1A6NIL9 109 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 MPC2O95563 127 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 APOC3P02656 99 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 SPINK7P58062 85 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 SEC11AP67812 179 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 SPATA8Q6RVD6 105 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 FAM213BQ8TBF2 198 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 SPRR4Q96PI1 79 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 SNHG12Q9BXW3 62 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 LINC00472Q9H8W2 130 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 NXT2Q9NPJ8 142 aaKnown RBP0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 ARHGEF5Q12774 1597 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 RAPGEF6Q8TEU7 1601 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 COL4A6Q14031 1691 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 KIF21AQ7Z4S6 1674 aa0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 FCGBPQ9Y6R7 5405 aaPredicted RBP0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 ZNF469Q96JG9 3925 aaPredicted RBP0.3□□□□□ -2.36
RN7SKP88-201ENST00000516847 ZFHX3Q15911 3703 aa0.29□□□□□ -2.36
RN7SKP88-201ENST00000516847 EHBP1L1Q8N3D4 1523 aa0.29□□□□□ -2.36
RN7SKP88-201ENST00000516847 CACNA1CQ13936 2221 aa0.29□□□□□ -2.36
RN7SKP88-201ENST00000516847 UNC13BO14795 1591 aa0.29□□□□□ -2.36
RN7SKP88-201ENST00000516847 ATOX1O00244 68 aa0.29□□□□□ -2.36
RN7SKP88-201ENST00000516847 GNGT2O14610 69 aa0.29□□□□□ -2.36
RN7SKP88-201ENST00000516847 MT-ATP8P03928 68 aa0.29□□□□□ -2.36
RN7SKP88-201ENST00000516847 MGPP08493 103 aa0.29□□□□□ -2.36
RN7SKP88-201ENST00000516847 NMBP08949 121 aa0.29□□□□□ -2.36
RN7SKP88-201ENST00000516847 SAA2P0DJI9 122 aaPredicted RBP0.29□□□□□ -2.36
RN7SKP88-201ENST00000516847 UBE2DNLQ8IWF7 75 aa0.29□□□□□ -2.36
RN7SKP88-201ENST00000516847 TRGV9Q99603 122 aa0.29□□□□□ -2.36
RN7SKP88-201ENST00000516847 MANBALQ9NQG1 85 aa0.29□□□□□ -2.36
RN7SKP88-201ENST00000516847 PLAC8Q9NZF1 115 aa0.29□□□□□ -2.36
RN7SKP88-201ENST00000516847 ANKRD26Q9UPS8 1709 aa0.29□□□□□ -2.36
RN7SKP88-201ENST00000516847 ANKRD36BQ8N2N9 1353 aa0.29□□□□□ -2.36
RN7SKP88-201ENST00000516847 AKAP12Q02952 1782 aa0.29□□□□□ -2.36
RN7SKP88-201ENST00000516847 ZNF236Q9UL36 1845 aa0.29□□□□□ -2.36
RN7SKP88-201ENST00000516847 AHCTF1Q8WYP5 2266 aa0.29□□□□□ -2.36
RN7SKP88-201ENST00000516847 KCPQ6ZWJ8 1503 aa0.28□□□□□ -2.36
RN7SKP88-201ENST00000516847 SMARCA2P51531 1590 aa0.28□□□□□ -2.36
RN7SKP88-201ENST00000516847 TTC37Q6PGP7 1564 aa0.28□□□□□ -2.36
RN7SKP88-201ENST00000516847 NOTCH1P46531 2555 aa0.28□□□□□ -2.36
RN7SKP88-201ENST00000516847 ASXL3Q9C0F0 2248 aa0.28□□□□□ -2.36
RN7SKP88-201ENST00000516847 A0A0D9SFI3 127 aa0.28□□□□□ -2.36
RN7SKP88-201ENST00000516847 TRBV7-7A0A0K0K1E9 115 aa0.28□□□□□ -2.36
RN7SKP88-201ENST00000516847 H7BZZ5 65 aa0.28□□□□□ -2.36
RN7SKP88-201ENST00000516847 IGLC1P0CG04 106 aa0.28□□□□□ -2.36
RN7SKP88-201ENST00000516847 TRAPPC2P0DI81 140 aa0.28□□□□□ -2.36
RN7SKP88-201ENST00000516847 TRAPPC2BP0DI82 140 aa0.28□□□□□ -2.36
RN7SKP88-201ENST00000516847 ASIPP42127 132 aa0.28□□□□□ -2.36
RN7SKP88-201ENST00000516847 UBA52P62987 128 aaKnown RBP0.28□□□□□ -2.36
RN7SKP88-201ENST00000516847 COX6A2Q02221 97 aa0.28□□□□□ -2.36
RN7SKP88-201ENST00000516847 KRTAP19-3Q7Z4W3 81 aa0.28□□□□□ -2.36
RN7SKP88-201ENST00000516847 FAM223AQ8IWN6 122 aa0.28□□□□□ -2.36
RN7SKP88-201ENST00000516847 SERP2Q8N6R1 65 aa0.28□□□□□ -2.36
RN7SKP88-201ENST00000516847 TMEM263Q8WUH6 116 aaKnown RBP0.28□□□□□ -2.36
RN7SKP88-201ENST00000516847 PMCHL2Q9BQD1 86 aa0.28□□□□□ -2.36
RN7SKP88-201ENST00000516847 LINC00846Q9NV44 126 aa0.28□□□□□ -2.36
RN7SKP88-201ENST00000516847 FAIMQ9NVQ4 179 aa0.28□□□□□ -2.36
RN7SKP88-201ENST00000516847 CACFD1Q9UGQ2 172 aa0.28□□□□□ -2.36
RN7SKP88-201ENST00000516847 ARL2-SNX15V9GYD0 113 aa0.28□□□□□ -2.36
RN7SKP88-201ENST00000516847 ADGRL2O95490 1459 aa0.28□□□□□ -2.37
RN7SKP88-201ENST00000516847 MLH3Q9UHC1 1453 aa0.28□□□□□ -2.37
RN7SKP88-201ENST00000516847 FRAS1Q86XX4 4008 aa0.28□□□□□ -2.37
RN7SKP88-201ENST00000516847 CHD9Q3L8U1 2897 aa0.27□□□□□ -2.37
RN7SKP88-201ENST00000516847 KDM5AP29375 1690 aaKnown RBP0.27□□□□□ -2.37
RN7SKP88-201ENST00000516847 FAM208BQ5VWN6 2430 aa0.27□□□□□ -2.37
RN7SKP88-201ENST00000516847 PDCD11Q14690 1871 aaKnown RBP0.27□□□□□ -2.37
RN7SKP88-201ENST00000516847 CELSR2Q9HCU4 2923 aa0.27□□□□□ -2.37
RN7SKP88-201ENST00000516847 TRBV25-1A0A075B6N4 114 aa0.27□□□□□ -2.37
RN7SKP88-201ENST00000516847 ZNF815PA8K554 130 aa0.27□□□□□ -2.37
RN7SKP88-201ENST00000516847 C10orf142B7Z368 130 aa0.27□□□□□ -2.37
RN7SKP88-201ENST00000516847 GYPAP02724 150 aa0.27□□□□□ -2.37
RN7SKP88-201ENST00000516847 S100A3P33764 101 aa0.27□□□□□ -2.37
RN7SKP88-201ENST00000516847 PMCHL1Q16048 86 aa0.27□□□□□ -2.37
RN7SKP88-201ENST00000516847 Q6JHZ5 121 aa0.27□□□□□ -2.37
RN7SKP88-201ENST00000516847 MYO7BQ6PIF6 2116 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms