RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 IFNA16P05015 189 aa-4.09□□□□□ -3.06
RNU6-542P-201ENST00000516405 TMED2Q15363 201 aa-4.09□□□□□ -3.06
RNU6-542P-201ENST00000516405 BAGE2Q86Y30 109 aa-4.09□□□□□ -3.06
RNU6-542P-201ENST00000516405 TMEM263Q8WUH6 116 aaKnown RBP-4.09□□□□□ -3.06
RNU6-542P-201ENST00000516405 V9GYH0 126 aa-4.09□□□□□ -3.06
RNU6-542P-201ENST00000516405 HMGB3O15347 200 aaKnown RBP-4.1□□□□□ -3.07
RNU6-542P-201ENST00000516405 DCTN3O75935 186 aa-4.1□□□□□ -3.07
RNU6-542P-201ENST00000516405 CST2P09228 141 aa-4.1□□□□□ -3.07
RNU6-542P-201ENST00000516405 HIST1H1EP10412 219 aaKnown RBP-4.1□□□□□ -3.07
RNU6-542P-201ENST00000516405 RTL8BQ17RB0 113 aa-4.1□□□□□ -3.07
RNU6-542P-201ENST00000516405 BORCS8Q96FH0 119 aa-4.1□□□□□ -3.07
RNU6-542P-201ENST00000516405 RTL8AQ9BWD3 113 aa-4.1□□□□□ -3.07
RNU6-542P-201ENST00000516405 WDFY4Q6ZS81 3184 aa-4.1□□□□□ -3.07
RNU6-542P-201ENST00000516405 KDM5CP41229 1560 aa-4.1□□□□□ -3.07
RNU6-542P-201ENST00000516405 DCHS1Q96JQ0 3298 aa-4.11□□□□□ -3.07
RNU6-542P-201ENST00000516405 APOEP02649 317 aa-4.11□□□□□ -3.07
RNU6-542P-201ENST00000516405 CRYGSP22914 178 aa-4.11□□□□□ -3.07
RNU6-542P-201ENST00000516405 DCUN1D2Q6PH85 259 aa-4.11□□□□□ -3.07
RNU6-542P-201ENST00000516405 SCIMPQ6UWF3 145 aa-4.11□□□□□ -3.07
RNU6-542P-201ENST00000516405 ZNF818PQ6ZRF7 136 aa-4.11□□□□□ -3.07
RNU6-542P-201ENST00000516405 CNPY4Q8N129 248 aa-4.11□□□□□ -3.07
RNU6-542P-201ENST00000516405 FDCSPQ8NFU4 85 aa-4.11□□□□□ -3.07
RNU6-542P-201ENST00000516405 ABCC10Q5T3U5 1492 aa-4.11□□□□□ -3.07
RNU6-542P-201ENST00000516405 CALB1P05937 261 aa-4.12□□□□□ -3.07
RNU6-542P-201ENST00000516405 MGPP08493 103 aa-4.12□□□□□ -3.07
RNU6-542P-201ENST00000516405 LCN9Q8WX39 176 aa-4.12□□□□□ -3.07
RNU6-542P-201ENST00000516405 RPRMQ9NS64 109 aa-4.12□□□□□ -3.07
RNU6-542P-201ENST00000516405 PRELID3BQ9Y3B1 194 aa-4.12□□□□□ -3.07
RNU6-542P-201ENST00000516405 NOP16Q9Y3C1 178 aaKnown RBP-4.12□□□□□ -3.07
RNU6-542P-201ENST00000516405 C9orf84Q5VXU9 1444 aa-4.12□□□□□ -3.07
RNU6-542P-201ENST00000516405 FABP12A6NFH5 140 aa-4.13□□□□□ -3.07
RNU6-542P-201ENST00000516405 H3BQV1 296 aa-4.13□□□□□ -3.07
RNU6-542P-201ENST00000516405 APOC3P02656 99 aa-4.13□□□□□ -3.07
RNU6-542P-201ENST00000516405 NCALDP61601 193 aa-4.13□□□□□ -3.07
RNU6-542P-201ENST00000516405 PMS2P3Q13401 168 aa-4.13□□□□□ -3.07
RNU6-542P-201ENST00000516405 Q6ZUT4 128 aa-4.13□□□□□ -3.07
RNU6-542P-201ENST00000516405 FGFR1OP2Q9NVK5 253 aa-4.13□□□□□ -3.07
RNU6-542P-201ENST00000516405 UHRF1BP1LA0JNW5 1464 aa-4.13□□□□□ -3.07
RNU6-542P-201ENST00000516405 TNP1P09430 55 aa-4.14□□□□□ -3.07
RNU6-542P-201ENST00000516405 TPPP2P59282 170 aa-4.14□□□□□ -3.07
RNU6-542P-201ENST00000516405 OGFRL1Q5TC84 451 aaPredicted RBP-4.14□□□□□ -3.07
RNU6-542P-201ENST00000516405 GINS3Q9BRX5 216 aa-4.14□□□□□ -3.07
RNU6-542P-201ENST00000516405 SLC35B3Q9H1N7 401 aa-4.14□□□□□ -3.07
RNU6-542P-201ENST00000516405 VPS13CQ709C8 3753 aa-4.14□□□□□ -3.07
RNU6-542P-201ENST00000516405 PCNTO95613 3336 aa-4.14□□□□□ -3.07
RNU6-542P-201ENST00000516405 LRRC37AA6NMS7 1700 aa-4.15□□□□□ -3.07
RNU6-542P-201ENST00000516405 C1orf167Q5SNV9 1468 aa-4.15□□□□□ -3.07
RNU6-542P-201ENST00000516405 TRAV13-1A0A0B4J241 112 aa-4.15□□□□□ -3.07
RNU6-542P-201ENST00000516405 FAM223BA6NKX1 122 aa-4.15□□□□□ -3.07
RNU6-542P-201ENST00000516405 LSM3P62310 102 aaKnown RBP-4.15□□□□□ -3.07
RNU6-542P-201ENST00000516405 ATP6V0E2Q8NHE4 81 aa-4.15□□□□□ -3.07
RNU6-542P-201ENST00000516405 PAIP2Q9BPZ3 127 aaKnown RBP-4.15□□□□□ -3.07
RNU6-542P-201ENST00000516405 LINC01558Q9Y6Z2 57 aa-4.15□□□□□ -3.07
RNU6-542P-201ENST00000516405 RGPD3A6NKT7 1758 aaPredicted RBP-4.16□□□□□ -3.08
RNU6-542P-201ENST00000516405 RGPD4Q7Z3J3 1758 aa-4.16□□□□□ -3.08
RNU6-542P-201ENST00000516405 RIIAD1A6NNX1 92 aa-4.16□□□□□ -3.08
RNU6-542P-201ENST00000516405 TMEM114B3SHH9 223 aa-4.16□□□□□ -3.08
RNU6-542P-201ENST00000516405 H0YIV9 168 aa-4.16□□□□□ -3.08
RNU6-542P-201ENST00000516405 SDC2P34741 201 aa-4.16□□□□□ -3.08
RNU6-542P-201ENST00000516405 SCGB2B2Q4G0G5 96 aa-4.16□□□□□ -3.08
RNU6-542P-201ENST00000516405 LINC01545Q5VT33 79 aa-4.16□□□□□ -3.08
RNU6-542P-201ENST00000516405 LINC00305Q7Z4B0 112 aa-4.16□□□□□ -3.08
RNU6-542P-201ENST00000516405 BTF3L4Q96K17 158 aa-4.16□□□□□ -3.08
RNU6-542P-201ENST00000516405 CLIP1P30622 1438 aa-4.16□□□□□ -3.08
RNU6-542P-201ENST00000516405 CCDC144AA2RUR9 1427 aa-4.17□□□□□ -3.08
RNU6-542P-201ENST00000516405 TMEM238C9JI98 176 aa-4.17□□□□□ -3.08
RNU6-542P-201ENST00000516405 H3BMG7 143 aa-4.17□□□□□ -3.08
RNU6-542P-201ENST00000516405 IFNA17P01571 189 aa-4.17□□□□□ -3.08
RNU6-542P-201ENST00000516405 B2MP61769 119 aa-4.17□□□□□ -3.08
RNU6-542P-201ENST00000516405 IMP3Q9NV31 184 aaKnown RBP-4.17□□□□□ -3.08
RNU6-542P-201ENST00000516405 UBE2D4Q9Y2X8 147 aa-4.17□□□□□ -3.08
RNU6-542P-201ENST00000516405 LENEPQ9Y5L5 61 aa-4.17□□□□□ -3.08
RNU6-542P-201ENST00000516405 LOC100130705A0A1B0GUX0 176 aa-4.18□□□□□ -3.08
RNU6-542P-201ENST00000516405 IGLC7A0M8Q6 106 aa-4.18□□□□□ -3.08
RNU6-542P-201ENST00000516405 IQCF5A8MTL0 148 aa-4.18□□□□□ -3.08
RNU6-542P-201ENST00000516405 GABARAPH6UMI1 98 aa-4.18□□□□□ -3.08
RNU6-542P-201ENST00000516405 J3QLW9 94 aa-4.18□□□□□ -3.08
RNU6-542P-201ENST00000516405 SLC25A5P05141 298 aaKnown RBP-4.18□□□□□ -3.08
RNU6-542P-201ENST00000516405 SRP9P49458 86 aaKnown RBP-4.18□□□□□ -3.08
RNU6-542P-201ENST00000516405 UBE2G1P62253 170 aa-4.18□□□□□ -3.08
RNU6-542P-201ENST00000516405 ARL6IP6Q8N6S5 226 aa-4.18□□□□□ -3.08
RNU6-542P-201ENST00000516405 SPTSSBQ8NFR3 76 aa-4.18□□□□□ -3.08
RNU6-542P-201ENST00000516405 FAM167A-AS1Q96KT0 104 aa-4.18□□□□□ -3.08
RNU6-542P-201ENST00000516405 NUP188Q5SRE5 1749 aa-4.18□□□□□ -3.08
RNU6-542P-201ENST00000516405 PLEKHH2Q8IVE3 1493 aa-4.18□□□□□ -3.08
RNU6-542P-201ENST00000516405 ANKRD36CQ5JPF3 1778 aa-4.19□□□□□ -3.08
RNU6-542P-201ENST00000516405 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-4.19□□□□□ -3.08
RNU6-542P-201ENST00000516405 M0QZK8 103 aa-4.19□□□□□ -3.08
RNU6-542P-201ENST00000516405 NDUFC2O95298 119 aa-4.19□□□□□ -3.08
RNU6-542P-201ENST00000516405 PP6455Q8WZ26 134 aa-4.19□□□□□ -3.08
RNU6-542P-201ENST00000516405 PRG4Q92954 1404 aaPredicted RBP-4.2□□□□□ -3.08
RNU6-542P-201ENST00000516405 TRDV1A0A1B0GX56 115 aa-4.2□□□□□ -3.08
RNU6-542P-201ENST00000516405 UQCRQO14949 82 aa-4.2□□□□□ -3.08
RNU6-542P-201ENST00000516405 APOA2P02652 100 aa-4.2□□□□□ -3.08
RNU6-542P-201ENST00000516405 HSD11B1P28845 292 aa-4.2□□□□□ -3.08
RNU6-542P-201ENST00000516405 LCN6P62502 163 aa-4.2□□□□□ -3.08
RNU6-542P-201ENST00000516405 SEC11AP67812 179 aa-4.2□□□□□ -3.08
RNU6-542P-201ENST00000516405 RPL7L1Q6DKI1 246 aaKnown RBP-4.2□□□□□ -3.08
RNU6-542P-201ENST00000516405 PTH2Q96A98 100 aa-4.2□□□□□ -3.08
RNU6-542P-201ENST00000516405 NLRP1Q9C000 1473 aa-4.2□□□□□ -3.08
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms