RNA–Protein interactions for RNA: ENST00000516257.1

RNU2-53P-201, Transcript of RNA, U2 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU2-53P, Length 147 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-53P-201ENST00000516257 ZNF236Q9UL36 1845 aa0.24□□□□□ -2.37
RNU2-53P-201ENST00000516257 KDM3BQ7LBC6 1761 aa0.24□□□□□ -2.37
RNU2-53P-201ENST00000516257 MYO7AQ13402 2215 aa0.23□□□□□ -2.37
RNU2-53P-201ENST00000516257 PI4KAP42356 2102 aa0.23□□□□□ -2.37
RNU2-53P-201ENST00000516257 TTC28Q96AY4 2481 aa0.23□□□□□ -2.37
RNU2-53P-201ENST00000516257 WNK3Q9BYP7 1800 aa0.23□□□□□ -2.37
RNU2-53P-201ENST00000516257 CACNA1EQ15878 2313 aa0.23□□□□□ -2.37
RNU2-53P-201ENST00000516257 C20orf202A1L168 122 aa0.23□□□□□ -2.37
RNU2-53P-201ENST00000516257 SFT2D2O95562 160 aa0.23□□□□□ -2.37
RNU2-53P-201ENST00000516257 S100PP25815 95 aa0.23□□□□□ -2.37
RNU2-53P-201ENST00000516257 S100A3P33764 101 aa0.23□□□□□ -2.37
RNU2-53P-201ENST00000516257 CDC42SE2Q9NRR3 84 aa0.23□□□□□ -2.37
RNU2-53P-201ENST00000516257 PRO0255Q9UI72 69 aa0.23□□□□□ -2.37
RNU2-53P-201ENST00000516257 SPCS1Q9Y6A9 102 aa0.23□□□□□ -2.37
RNU2-53P-201ENST00000516257 LRP6O75581 1613 aa0.23□□□□□ -2.37
RNU2-53P-201ENST00000516257 ARHGAP5Q13017 1502 aa0.23□□□□□ -2.37
RNU2-53P-201ENST00000516257 CACNA1HO95180 2353 aa0.23□□□□□ -2.37
RNU2-53P-201ENST00000516257 PSME4Q14997 1843 aa0.22□□□□□ -2.37
RNU2-53P-201ENST00000516257 NAP1L6A6NFF2 107 aa0.22□□□□□ -2.37
RNU2-53P-201ENST00000516257 BCE1O60756 84 aa0.22□□□□□ -2.37
RNU2-53P-201ENST00000516257 HSD52Q0P140 79 aa0.22□□□□□ -2.37
RNU2-53P-201ENST00000516257 APCP25054 2843 aa0.22□□□□□ -2.37
RNU2-53P-201ENST00000516257 SHANK2Q9UPX8 1470 aa0.22□□□□□ -2.37
RNU2-53P-201ENST00000516257 SPHKAPQ2M3C7 1700 aa0.21□□□□□ -2.38
RNU2-53P-201ENST00000516257 RAPGEF6Q8TEU7 1601 aa0.21□□□□□ -2.38
RNU2-53P-201ENST00000516257 BIVM-ERCC5R4GMW8 1640 aa0.21□□□□□ -2.38
RNU2-53P-201ENST00000516257 ARHGEF5Q12774 1597 aa0.21□□□□□ -2.38
RNU2-53P-201ENST00000516257 ERCC6L2Q5T890 1561 aa0.21□□□□□ -2.38
RNU2-53P-201ENST00000516257 TRAV22A0A0B4J277 110 aa0.21□□□□□ -2.38
RNU2-53P-201ENST00000516257 MGPP08493 103 aa0.21□□□□□ -2.38
RNU2-53P-201ENST00000516257 UBE2D3P61077 147 aa0.21□□□□□ -2.38
RNU2-53P-201ENST00000516257 UBE2D2P62837 147 aa0.21□□□□□ -2.38
RNU2-53P-201ENST00000516257 Q0VG73 95 aa0.21□□□□□ -2.38
RNU2-53P-201ENST00000516257 Q6JHZ5 121 aa0.21□□□□□ -2.38
RNU2-53P-201ENST00000516257 NXT2Q9NPJ8 142 aaKnown RBP0.21□□□□□ -2.38
RNU2-53P-201ENST00000516257 MANBALQ9NQG1 85 aa0.21□□□□□ -2.38
RNU2-53P-201ENST00000516257 PLXNB2O15031 1838 aa0.21□□□□□ -2.38
RNU2-53P-201ENST00000516257 SBF2Q86WG5 1849 aa0.21□□□□□ -2.38
RNU2-53P-201ENST00000516257 TET3O43151 1660 aa0.21□□□□□ -2.38
RNU2-53P-201ENST00000516257 LAMC1P11047 1609 aa0.2□□□□□ -2.38
RNU2-53P-201ENST00000516257 KMT2DO14686 5537 aa0.2□□□□□ -2.38
RNU2-53P-201ENST00000516257 HMGXB3Q12766 1538 aa0.2□□□□□ -2.38
RNU2-53P-201ENST00000516257 TMEM262E9PQX1 116 aa0.2□□□□□ -2.38
RNU2-53P-201ENST00000516257 COX6CP09669 75 aa0.2□□□□□ -2.38
RNU2-53P-201ENST00000516257 IGLC1P0CG04 106 aa0.2□□□□□ -2.38
RNU2-53P-201ENST00000516257 SNCAP37840 140 aa0.2□□□□□ -2.38
RNU2-53P-201ENST00000516257 KRTDAPP60985 99 aa0.2□□□□□ -2.38
RNU2-53P-201ENST00000516257 CGREF1Q99674 301 aa0.2□□□□□ -2.38
RNU2-53P-201ENST00000516257 TCEAL7Q9BRU2 100 aa0.2□□□□□ -2.38
RNU2-53P-201ENST00000516257 FAIMQ9NVQ4 179 aa0.2□□□□□ -2.38
RNU2-53P-201ENST00000516257 ARL2-SNX15V9GYD0 113 aa0.2□□□□□ -2.38
RNU2-53P-201ENST00000516257 ANK2Q01484 3957 aa0.19□□□□□ -2.38
RNU2-53P-201ENST00000516257 ZFYVE16Q7Z3T8 1539 aa0.19□□□□□ -2.38
RNU2-53P-201ENST00000516257 EHBP1L1Q8N3D4 1523 aa0.19□□□□□ -2.38
RNU2-53P-201ENST00000516257 TCHHQ07283 1943 aa0.19□□□□□ -2.38
RNU2-53P-201ENST00000516257 SYNE1Q8NF91 8797 aaKnown RBP0.19□□□□□ -2.38
RNU2-53P-201ENST00000516257 KDM5AP29375 1690 aaKnown RBP0.19□□□□□ -2.38
RNU2-53P-201ENST00000516257 FAM223AQ8IWN6 122 aa0.19□□□□□ -2.38
RNU2-53P-201ENST00000516257 TMEM263Q8WUH6 116 aaKnown RBP0.19□□□□□ -2.38
RNU2-53P-201ENST00000516257 C14orf144Q96I85 54 aa0.19□□□□□ -2.38
RNU2-53P-201ENST00000516257 SPRR4Q96PI1 79 aa0.19□□□□□ -2.38
RNU2-53P-201ENST00000516257 TP53AIP1Q9HCN2 124 aa0.19□□□□□ -2.38
RNU2-53P-201ENST00000516257 PRO1854Q9UHT4 67 aa0.19□□□□□ -2.38
RNU2-53P-201ENST00000516257 TPRP12270 2363 aaKnown RBP0.19□□□□□ -2.38
RNU2-53P-201ENST00000516257 DIP2CQ9Y2E4 1556 aa0.19□□□□□ -2.38
RNU2-53P-201ENST00000516257 CC2D2AQ9P2K1 1620 aa0.18□□□□□ -2.38
RNU2-53P-201ENST00000516257 CRYM-AS1A6NIL9 109 aa0.18□□□□□ -2.38
RNU2-53P-201ENST00000516257 M0R3E3 92 aa0.18□□□□□ -2.38
RNU2-53P-201ENST00000516257 TRAPPC2P0DI81 140 aa0.18□□□□□ -2.38
RNU2-53P-201ENST00000516257 TRAPPC2BP0DI82 140 aa0.18□□□□□ -2.38
RNU2-53P-201ENST00000516257 Q8IZM0 81 aa0.18□□□□□ -2.38
RNU2-53P-201ENST00000516257 U3KQA8 63 aa0.18□□□□□ -2.38
RNU2-53P-201ENST00000516257 BDP1A6H8Y1 2624 aa0.17□□□□□ -2.38
RNU2-53P-201ENST00000516257 NHSL1Q5SYE7 1610 aa0.17□□□□□ -2.38
RNU2-53P-201ENST00000516257 TMEM218A2RU14 115 aa0.17□□□□□ -2.38
RNU2-53P-201ENST00000516257 I3L2K1 104 aa0.17□□□□□ -2.38
RNU2-53P-201ENST00000516257 C12orf57Q99622 126 aa0.17□□□□□ -2.38
RNU2-53P-201ENST00000516257 ABCA12Q86UK0 2595 aa0.17□□□□□ -2.38
RNU2-53P-201ENST00000516257 MRC2Q9UBG0 1479 aa0.16□□□□□ -2.38
RNU2-53P-201ENST00000516257 FAT4Q6V0I7 4981 aa0.16□□□□□ -2.38
RNU2-53P-201ENST00000516257 NSD3Q9BZ95 1437 aa0.16□□□□□ -2.38
RNU2-53P-201ENST00000516257 ASXL3Q9C0F0 2248 aa0.16□□□□□ -2.38
RNU2-53P-201ENST00000516257 CFDP00746 253 aaPredicted RBP0.16□□□□□ -2.38
RNU2-53P-201ENST00000516257 UBA52P62987 128 aaKnown RBP0.16□□□□□ -2.38
RNU2-53P-201ENST00000516257 WFDC2Q14508 124 aa0.16□□□□□ -2.38
RNU2-53P-201ENST00000516257 PIGYQ3MUY2 71 aa0.16□□□□□ -2.38
RNU2-53P-201ENST00000516257 TOPAZ1Q8N9V7 1692 aa0.16□□□□□ -2.38
RNU2-53P-201ENST00000516257 TOP2BQ02880 1626 aa0.16□□□□□ -2.38
RNU2-53P-201ENST00000516257 LRP1Q07954 4544 aaKnown RBP0.15□□□□□ -2.39
RNU2-53P-201ENST00000516257 ABCC5O15440 1437 aa0.15□□□□□ -2.39
RNU2-53P-201ENST00000516257 USP24Q9UPU5 2620 aa0.15□□□□□ -2.39
RNU2-53P-201ENST00000516257 TRAV30A0A087WSZ9 112 aa0.15□□□□□ -2.39
RNU2-53P-201ENST00000516257 TRBV6-1A0A0K0K1D8 114 aa0.15□□□□□ -2.39
RNU2-53P-201ENST00000516257 hADV29S1A0JD25 119 aa0.15□□□□□ -2.39
RNU2-53P-201ENST00000516257 FAM223BA6NKX1 122 aa0.15□□□□□ -2.39
RNU2-53P-201ENST00000516257 ATP6V1G2-DDX39BF2Z307 99 aa0.15□□□□□ -2.39
RNU2-53P-201ENST00000516257 SAA2P0DJI9 122 aaPredicted RBP0.15□□□□□ -2.39
RNU2-53P-201ENST00000516257 Q5VSD8 79 aa0.15□□□□□ -2.39
RNU2-53P-201ENST00000516257 C10orf113Q5VZT2 155 aa0.15□□□□□ -2.39
RNU2-53P-201ENST00000516257 SFTA2Q6UW10 78 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms