RNA–Protein interactions for RNA: ENST00000515895.1

SNORA40.9-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 93 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.9-201ENST00000515895 PBRM1Q86U86 1689 aa-1.49□□□□□ -2.65
SNORA40.9-201ENST00000515895 NBASA2RRP1 2371 aa-1.49□□□□□ -2.65
SNORA40.9-201ENST00000515895 GAPVD1Q14C86 1478 aa-1.5□□□□□ -2.65
SNORA40.9-201ENST00000515895 CDK5RAP2Q96SN8 1893 aa-1.5□□□□□ -2.65
SNORA40.9-201ENST00000515895 PRRC2CQ9Y520 2896 aaKnown RBP-1.5□□□□□ -2.65
SNORA40.9-201ENST00000515895 NDUFB6O95139 128 aa-1.5□□□□□ -2.65
SNORA40.9-201ENST00000515895 HIST1H1AQ02539 215 aaPredicted RBP-1.5□□□□□ -2.65
SNORA40.9-201ENST00000515895 AMELXQ99217 191 aa-1.5□□□□□ -2.65
SNORA40.9-201ENST00000515895 V9GYH0 126 aa-1.5□□□□□ -2.65
SNORA40.9-201ENST00000515895 MYH6P13533 1939 aa-1.5□□□□□ -2.65
SNORA40.9-201ENST00000515895 ADGRB1O14514 1584 aa-1.51□□□□□ -2.65
SNORA40.9-201ENST00000515895 IGLC6P0CF74 106 aa-1.51□□□□□ -2.65
SNORA40.9-201ENST00000515895 DEFB135Q30KP9 77 aa-1.51□□□□□ -2.65
SNORA40.9-201ENST00000515895 C10orf128Q5T292 105 aa-1.51□□□□□ -2.65
SNORA40.9-201ENST00000515895 LENEPQ9Y5L5 61 aa-1.51□□□□□ -2.65
SNORA40.9-201ENST00000515895 KDM5AP29375 1690 aaKnown RBP-1.51□□□□□ -2.65
SNORA40.9-201ENST00000515895 NWD2Q9ULI1 1742 aa-1.52□□□□□ -2.65
SNORA40.9-201ENST00000515895 SPAARA0A1B0GVQ0 90 aa-1.52□□□□□ -2.65
SNORA40.9-201ENST00000515895 RRAS2P62070 204 aaPredicted RBP-1.52□□□□□ -2.65
SNORA40.9-201ENST00000515895 ALX1Q15699 326 aa-1.52□□□□□ -2.65
SNORA40.9-201ENST00000515895 AQP10Q96PS8 301 aa-1.52□□□□□ -2.65
SNORA40.9-201ENST00000515895 SPANXA1Q9NS26 97 aa-1.52□□□□□ -2.65
SNORA40.9-201ENST00000515895 NSD3Q9BZ95 1437 aa-1.52□□□□□ -2.65
SNORA40.9-201ENST00000515895 SBF2Q86WG5 1849 aa-1.52□□□□□ -2.65
SNORA40.9-201ENST00000515895 OVOS2A0A0J9YW53 1432 aa-1.53□□□□□ -2.65
SNORA40.9-201ENST00000515895 HCG22E2RYF7 251 aa-1.53□□□□□ -2.65
SNORA40.9-201ENST00000515895 DOCK1Q14185 1865 aa-1.53□□□□□ -2.65
SNORA40.9-201ENST00000515895 Q6AWC8 147 aa-1.53□□□□□ -2.65
SNORA40.9-201ENST00000515895 OVOS2Q6IE36 1432 aa-1.53□□□□□ -2.65
SNORA40.9-201ENST00000515895 SMIM15Q7Z3B0 74 aa-1.53□□□□□ -2.65
SNORA40.9-201ENST00000515895 BAGE2Q86Y30 109 aa-1.53□□□□□ -2.65
SNORA40.9-201ENST00000515895 IFT140Q96RY7 1462 aa-1.53□□□□□ -2.65
SNORA40.9-201ENST00000515895 PKD1P98161 4303 aa-1.53□□□□□ -2.65
SNORA40.9-201ENST00000515895 EPPK1P58107 5090 aaKnown RBP-1.54□□□□□ -2.66
SNORA40.9-201ENST00000515895 POLA1P09884 1462 aaPredicted RBP-1.54□□□□□ -2.66
SNORA40.9-201ENST00000515895 DISP2A7MBM2 1401 aa-1.54□□□□□ -2.66
SNORA40.9-201ENST00000515895 UQCR11O14957 56 aa-1.54□□□□□ -2.66
SNORA40.9-201ENST00000515895 SCIMPQ6UWF3 145 aa-1.54□□□□□ -2.66
SNORA40.9-201ENST00000515895 KNL1Q8NG31 2342 aa-1.54□□□□□ -2.66
SNORA40.9-201ENST00000515895 TRAV13-2A0A0B4J235 113 aa-1.55□□□□□ -2.66
SNORA40.9-201ENST00000515895 F8VRH5 84 aa-1.55□□□□□ -2.66
SNORA40.9-201ENST00000515895 APOC3P02656 99 aa-1.55□□□□□ -2.66
SNORA40.9-201ENST00000515895 TTC9CQ8N5M4 171 aa-1.55□□□□□ -2.66
SNORA40.9-201ENST00000515895 TEP1Q99973 2627 aaKnown RBP-1.55□□□□□ -2.66
SNORA40.9-201ENST00000515895 NCR2O95944 276 aa-1.56□□□□□ -2.66
SNORA40.9-201ENST00000515895 TSPAN19P0C672 248 aa-1.56□□□□□ -2.66
SNORA40.9-201ENST00000515895 NBEAP1P0C6P0 100 aa-1.56□□□□□ -2.66
SNORA40.9-201ENST00000515895 LINC00694P0DN24 101 aa-1.56□□□□□ -2.66
SNORA40.9-201ENST00000515895 TPPP2P59282 170 aa-1.56□□□□□ -2.66
SNORA40.9-201ENST00000515895 ZNF518AQ6AHZ1 1483 aa-1.56□□□□□ -2.66
SNORA40.9-201ENST00000515895 SHANK2Q9UPX8 1470 aa-1.56□□□□□ -2.66
SNORA40.9-201ENST00000515895 KIF21AQ7Z4S6 1674 aa-1.57□□□□□ -2.66
SNORA40.9-201ENST00000515895 TRBV7-4A0A0J9YYF1 115 aa-1.57□□□□□ -2.66
SNORA40.9-201ENST00000515895 SYS1-DBNDD2H3BUS1 97 aa-1.57□□□□□ -2.66
SNORA40.9-201ENST00000515895 J3QR89 54 aa-1.57□□□□□ -2.66
SNORA40.9-201ENST00000515895 COX8AP10176 69 aa-1.57□□□□□ -2.66
SNORA40.9-201ENST00000515895 TAC4Q86UU9 113 aa-1.57□□□□□ -2.66
SNORA40.9-201ENST00000515895 AIF1LQ9BQI0 150 aa-1.57□□□□□ -2.66
SNORA40.9-201ENST00000515895 AKAP13Q12802 2813 aa-1.57□□□□□ -2.66
SNORA40.9-201ENST00000515895 LAMA1P25391 3075 aa-1.58□□□□□ -2.66
SNORA40.9-201ENST00000515895 NEFHP12036 1026 aa-1.58□□□□□ -2.66
SNORA40.9-201ENST00000515895 TULP4Q9NRJ4 1543 aa-1.58□□□□□ -2.66
SNORA40.9-201ENST00000515895 DNAH3Q8TD57 4116 aa-1.58□□□□□ -2.66
SNORA40.9-201ENST00000515895 MUC17Q685J3 4493 aa-1.59□□□□□ -2.66
SNORA40.9-201ENST00000515895 DEFB112Q30KQ8 113 aa-1.59□□□□□ -2.66
SNORA40.9-201ENST00000515895 SMIM3Q9BZL3 60 aa-1.59□□□□□ -2.66
SNORA40.9-201ENST00000515895 APLNQ9ULZ1 77 aa-1.59□□□□□ -2.66
SNORA40.9-201ENST00000515895 LINC01558Q9Y6Z2 57 aa-1.59□□□□□ -2.66
SNORA40.9-201ENST00000515895 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.59□□□□□ -2.66
SNORA40.9-201ENST00000515895 PPIP5K1Q6PFW1 1433 aa-1.59□□□□□ -2.66
SNORA40.9-201ENST00000515895 PKHD1L1Q86WI1 4243 aa-1.59□□□□□ -2.66
SNORA40.9-201ENST00000515895 AKAP9Q99996 3911 aa-1.59□□□□□ -2.66
SNORA40.9-201ENST00000515895 ARHGEF12Q9NZN5 1544 aa-1.6□□□□□ -2.67
SNORA40.9-201ENST00000515895 PIGBOS1A0A0B4J2F0 54 aa-1.6□□□□□ -2.67
SNORA40.9-201ENST00000515895 IGLC7A0M8Q6 106 aa-1.6□□□□□ -2.67
SNORA40.9-201ENST00000515895 IFNGP01579 166 aa-1.6□□□□□ -2.67
SNORA40.9-201ENST00000515895 GUCA1AP43080 201 aaPredicted RBP-1.6□□□□□ -2.67
SNORA40.9-201ENST00000515895 KCNRGQ8N5I3 272 aa-1.6□□□□□ -2.67
SNORA40.9-201ENST00000515895 SPRR2FQ96RM1 72 aa-1.6□□□□□ -2.67
SNORA40.9-201ENST00000515895 NDUFA4L2Q9NRX3 87 aa-1.6□□□□□ -2.67
SNORA40.9-201ENST00000515895 PRG4Q92954 1404 aaPredicted RBP-1.6□□□□□ -2.67
SNORA40.9-201ENST00000515895 VPS13DQ5THJ4 4388 aa-1.61□□□□□ -2.67
SNORA40.9-201ENST00000515895 TNRC18O15417 2968 aaPredicted RBP-1.61□□□□□ -2.67
SNORA40.9-201ENST00000515895 GNG14A0A1W2PPG7 69 aa-1.61□□□□□ -2.67
SNORA40.9-201ENST00000515895 M0R2Z0 102 aa-1.61□□□□□ -2.67
SNORA40.9-201ENST00000515895 USMG5Q96IX5 58 aa-1.61□□□□□ -2.67
SNORA40.9-201ENST00000515895 GSKIPQ9P0R6 139 aa-1.61□□□□□ -2.67
SNORA40.9-201ENST00000515895 REV3LO60673 3130 aa-1.62□□□□□ -2.67
SNORA40.9-201ENST00000515895 ZZEF1O43149 2961 aa-1.62□□□□□ -2.67
SNORA40.9-201ENST00000515895 KIAA0556O60303 1618 aa-1.62□□□□□ -2.67
SNORA40.9-201ENST00000515895 ARAP2Q8WZ64 1704 aa-1.62□□□□□ -2.67
SNORA40.9-201ENST00000515895 HYDINQ4G0P3 5121 aa-1.62□□□□□ -2.67
SNORA40.9-201ENST00000515895 LINC00959A0A1B0GUT2 108 aa-1.62□□□□□ -2.67
SNORA40.9-201ENST00000515895 CPSF4LA6NMK7 179 aaKnown RBP-1.62□□□□□ -2.67
SNORA40.9-201ENST00000515895 K7ERU9 68 aa-1.62□□□□□ -2.67
SNORA40.9-201ENST00000515895 TMEM263Q8WUH6 116 aaKnown RBP-1.62□□□□□ -2.67
SNORA40.9-201ENST00000515895 DYNLRB1Q9NP97 96 aa-1.62□□□□□ -2.67
SNORA40.9-201ENST00000515895 PATJQ8NI35 1801 aa-1.62□□□□□ -2.67
SNORA40.9-201ENST00000515895 DOCK2Q92608 1830 aa-1.62□□□□□ -2.67
SNORA40.9-201ENST00000515895 TRANK1O15050 2925 aa-1.63□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms