RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 KPRPQ5T749 579 aaPredicted RBP2.06□□□□□ -2.08
PVT1-202ENST00000512617 SPINT4Q6UDR6 99 aa2.06□□□□□ -2.08
PVT1-202ENST00000512617 KRTAP7-1Q8IUC3 87 aa2.06□□□□□ -2.08
PVT1-202ENST00000512617 MYOZ3Q8TDC0 251 aa2.06□□□□□ -2.08
PVT1-202ENST00000512617 S100ZQ8WXG8 99 aa2.06□□□□□ -2.08
PVT1-202ENST00000512617 SCRT1Q9BWW7 348 aa2.06□□□□□ -2.08
PVT1-202ENST00000512617 ST20Q9HBF5 79 aa2.06□□□□□ -2.08
PVT1-202ENST00000512617 MRPL35Q9NZE8 188 aaKnown RBP2.06□□□□□ -2.08
PVT1-202ENST00000512617 ANKRD12Q6UB98 2062 aa2.06□□□□□ -2.08
PVT1-202ENST00000512617 IGKV1D-17A0A075B6S4 117 aa2.05□□□□□ -2.08
PVT1-202ENST00000512617 NAP1L6A6NFF2 107 aa2.05□□□□□ -2.08
PVT1-202ENST00000512617 KRTAP9-7A8MTY7 169 aa2.05□□□□□ -2.08
PVT1-202ENST00000512617 H3BRM9 83 aa2.05□□□□□ -2.08
PVT1-202ENST00000512617 ASAH2BP0C7U1 165 aa2.05□□□□□ -2.08
PVT1-202ENST00000512617 RNASE2P10153 161 aaKnown RBP2.05□□□□□ -2.08
PVT1-202ENST00000512617 HINT1P49773 126 aaPredicted RBP2.05□□□□□ -2.08
PVT1-202ENST00000512617 HMGA2P52926 109 aa2.05□□□□□ -2.08
PVT1-202ENST00000512617 SEC11AP67812 179 aa2.05□□□□□ -2.08
PVT1-202ENST00000512617 ERHP84090 104 aaKnown RBP2.05□□□□□ -2.08
PVT1-202ENST00000512617 MIR22HGQ0VDD5 57 aa2.05□□□□□ -2.08
PVT1-202ENST00000512617 IGFBP7Q16270 282 aa2.05□□□□□ -2.08
PVT1-202ENST00000512617 DEFB110Q30KQ9 67 aa2.05□□□□□ -2.08
PVT1-202ENST00000512617 LINC00483Q53H64 154 aa2.05□□□□□ -2.08
PVT1-202ENST00000512617 C9orf116Q5BN46 136 aaPredicted RBP2.05□□□□□ -2.08
PVT1-202ENST00000512617 SLC48A1Q6P1K1 146 aa2.05□□□□□ -2.08
PVT1-202ENST00000512617 C2orf82Q6UX34 121 aa2.05□□□□□ -2.08
PVT1-202ENST00000512617 Q8N9P0 234 aaPredicted RBP2.05□□□□□ -2.08
PVT1-202ENST00000512617 MAPK1IP1LQ8NDC0 245 aa2.05□□□□□ -2.08
PVT1-202ENST00000512617 FDCSPQ8NFU4 85 aa2.05□□□□□ -2.08
PVT1-202ENST00000512617 OR10AG1Q8NH19 301 aa2.05□□□□□ -2.08
PVT1-202ENST00000512617 PPDPFLQ8WWR9 84 aa2.05□□□□□ -2.08
PVT1-202ENST00000512617 KRTAP4-11Q9BYQ6 195 aa2.05□□□□□ -2.08
PVT1-202ENST00000512617 CYTL1Q9NRR1 136 aa2.05□□□□□ -2.08
PVT1-202ENST00000512617 KLK12Q9UKR0 248 aa2.05□□□□□ -2.08
PVT1-202ENST00000512617 SPCS1Q9Y6A9 102 aa2.05□□□□□ -2.08
PVT1-202ENST00000512617 TNRC6AQ8NDV7 1962 aaKnown RBP2.05□□□□□ -2.08
PVT1-202ENST00000512617 HELZ2Q9BYK8 2649 aaKnown RBP2.04□□□□□ -2.08
PVT1-202ENST00000512617 SNRNP200O75643 2136 aaKnown RBP2.04□□□□□ -2.08
PVT1-202ENST00000512617 UBR5O95071 2799 aaPredicted RBP2.04□□□□□ -2.08
PVT1-202ENST00000512617 PRB4P10163 310 aaPredicted RBP2.04□□□□□ -2.08
PVT1-202ENST00000512617 DEFB113Q30KQ7 82 aa2.04□□□□□ -2.08
PVT1-202ENST00000512617 ZNF791Q3KP31 576 aaPredicted RBP2.04□□□□□ -2.08
PVT1-202ENST00000512617 TENM4Q6N022 2769 aa2.04□□□□□ -2.08
PVT1-202ENST00000512617 ZCCHC23Q6ZST2 131 aa2.04□□□□□ -2.08
PVT1-202ENST00000512617 C9orf106Q8NAJ2 232 aa2.04□□□□□ -2.08
PVT1-202ENST00000512617 SPTSSBQ8NFR3 76 aa2.04□□□□□ -2.08
PVT1-202ENST00000512617 ZNF431Q8TF32 576 aaPredicted RBP2.04□□□□□ -2.08
PVT1-202ENST00000512617 GFRA4Q9GZZ7 299 aa2.04□□□□□ -2.08
PVT1-202ENST00000512617 NDUFB11Q9NX14 153 aa2.04□□□□□ -2.08
PVT1-202ENST00000512617 SHANK1Q9Y566 2161 aa2.04□□□□□ -2.08
PVT1-202ENST00000512617 MYO18BQ8IUG5 2567 aa2.04□□□□□ -2.08
PVT1-202ENST00000512617 TLN1Q9Y490 2541 aaKnown RBP2.03□□□□□ -2.08
PVT1-202ENST00000512617 PTPN13Q12923 2485 aa2.03□□□□□ -2.08
PVT1-202ENST00000512617 MED13Q9UHV7 2174 aa2.03□□□□□ -2.08
PVT1-202ENST00000512617 ANKRD17O75179 2603 aaKnown RBP2.03□□□□□ -2.08
PVT1-202ENST00000512617 IGLV2-18A0A075B6J9 118 aa2.03□□□□□ -2.08
PVT1-202ENST00000512617 TMSB15BA0A087X1C1 80 aa2.03□□□□□ -2.08
PVT1-202ENST00000512617 IGKV3D-11A0A0A0MRZ8 115 aa2.03□□□□□ -2.08
PVT1-202ENST00000512617 TRAV13-2A0A0B4J235 113 aa2.03□□□□□ -2.08
PVT1-202ENST00000512617 CRYM-AS1A6NIL9 109 aa2.03□□□□□ -2.08
PVT1-202ENST00000512617 KRTAP29-1A8MX34 341 aaPredicted RBP2.03□□□□□ -2.08
PVT1-202ENST00000512617 ODF3BA8MYP8 253 aa2.03□□□□□ -2.08
PVT1-202ENST00000512617 H0YGG7 62 aa2.03□□□□□ -2.08
PVT1-202ENST00000512617 NUPR1O60356 82 aa2.03□□□□□ -2.08
PVT1-202ENST00000512617 IGKV3-11P04433 115 aa2.03□□□□□ -2.08
PVT1-202ENST00000512617 NDPQ00604 133 aa2.03□□□□□ -2.08
PVT1-202ENST00000512617 CLECL1Q8IZS7 167 aa2.03□□□□□ -2.08
PVT1-202ENST00000512617 SERP2Q8N6R1 65 aa2.03□□□□□ -2.08
PVT1-202ENST00000512617 Q8TAT8 98 aa2.03□□□□□ -2.08
PVT1-202ENST00000512617 CMTM2Q8TAZ6 248 aa2.03□□□□□ -2.08
PVT1-202ENST00000512617 TRGV9Q99603 122 aa2.03□□□□□ -2.08
PVT1-202ENST00000512617 LINC00474Q9P2X8 69 aa2.03□□□□□ -2.08
PVT1-202ENST00000512617 CACFD1Q9UGQ2 172 aa2.03□□□□□ -2.08
PVT1-202ENST00000512617 ZNF407Q9C0G0 2248 aa2.03□□□□□ -2.08
PVT1-202ENST00000512617 SPTBP11277 2137 aa2.03□□□□□ -2.08
PVT1-202ENST00000512617 CPAMD8Q8IZJ3 1885 aa2.03□□□□□ -2.09
PVT1-202ENST00000512617 TEP1Q99973 2627 aaKnown RBP2.03□□□□□ -2.09
PVT1-202ENST00000512617 COL12A1Q99715 3063 aa2.02□□□□□ -2.09
PVT1-202ENST00000512617 TRAV12-1A0A0B4J245 112 aa2.02□□□□□ -2.09
PVT1-202ENST00000512617 TRBV10-3A0A0K0K1G6 114 aa2.02□□□□□ -2.09
PVT1-202ENST00000512617 A0A1W2PPM0 123 aa2.02□□□□□ -2.09
PVT1-202ENST00000512617 HCG22E2RYF7 251 aa2.02□□□□□ -2.09
PVT1-202ENST00000512617 NDUFC1O43677 76 aa2.02□□□□□ -2.09
PVT1-202ENST00000512617 LCE5AQ5TCM9 118 aa2.02□□□□□ -2.09
PVT1-202ENST00000512617 CYP4F30PQ9H0H9 118 aa2.02□□□□□ -2.09
PVT1-202ENST00000512617 NXT2Q9NPJ8 142 aaKnown RBP2.02□□□□□ -2.09
PVT1-202ENST00000512617 LHFPL6Q9Y693 200 aa2.02□□□□□ -2.09
PVT1-202ENST00000512617 SMAD5-AS1Q9Y6J3 95 aa2.02□□□□□ -2.09
PVT1-202ENST00000512617 KIF25-AS1Q9Y6Z4 181 aa2.02□□□□□ -2.09
PVT1-202ENST00000512617 R4GN34 69 aa2.02□□□□□ -2.09
PVT1-202ENST00000512617 PIEZO2Q9H5I5 2752 aa2.02□□□□□ -2.09
PVT1-202ENST00000512617 PLXNB1O43157 2135 aa2.02□□□□□ -2.09
PVT1-202ENST00000512617 CROCCQ5TZA2 2017 aa2.01□□□□□ -2.09
PVT1-202ENST00000512617 SPTA1P02549 2419 aa2.01□□□□□ -2.09
PVT1-202ENST00000512617 SEC16AO15027 2179 aa2.01□□□□□ -2.09
PVT1-202ENST00000512617 TRAV40A0A0B4J280 105 aa2.01□□□□□ -2.09
PVT1-202ENST00000512617 CFDP00746 253 aaPredicted RBP2.01□□□□□ -2.09
PVT1-202ENST00000512617 STATHP02808 62 aa2.01□□□□□ -2.09
PVT1-202ENST00000512617 IGLC2P0DOY2 106 aa2.01□□□□□ -2.09
PVT1-202ENST00000512617 IGLC3P0DOY3 106 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms