RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 APC2O95996 2303 aa4.03□□□□□ -1.76
TRAPPC11-209ENST00000512476 ZGRF1Q86YA3 2104 aa4.03□□□□□ -1.76
TRAPPC11-209ENST00000512476 RPL36AP83881 106 aaKnown RBP4.02□□□□□ -1.77
TRAPPC11-209ENST00000512476 Q8N9P0 234 aaPredicted RBP4.02□□□□□ -1.77
TRAPPC11-209ENST00000512476 MGST2Q99735 147 aa4.02□□□□□ -1.77
TRAPPC11-209ENST00000512476 RABAC1Q9UI14 185 aa4.02□□□□□ -1.77
TRAPPC11-209ENST00000512476 ABCA4P78363 2273 aa4.02□□□□□ -1.77
TRAPPC11-209ENST00000512476 URB1O60287 2271 aaKnown RBP4.02□□□□□ -1.77
TRAPPC11-209ENST00000512476 CFAP47Q6ZTR5 3102 aa4.02□□□□□ -1.77
TRAPPC11-209ENST00000512476 TMEM14DPA8MWL7 114 aa4.02□□□□□ -1.77
TRAPPC11-209ENST00000512476 IGKV3-15P01624 115 aa4.02□□□□□ -1.77
TRAPPC11-209ENST00000512476 MSMBP08118 114 aa4.02□□□□□ -1.77
TRAPPC11-209ENST00000512476 SMIM4Q8WVI0 70 aa4.02□□□□□ -1.77
TRAPPC11-209ENST00000512476 TRBV10-2A0A0K0K1G8 114 aa4.01□□□□□ -1.77
TRAPPC11-209ENST00000512476 H7C2G1 150 aa4.01□□□□□ -1.77
TRAPPC11-209ENST00000512476 ATP5EP56381 51 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC11-209ENST00000512476 MRPL35Q9NZE8 188 aaKnown RBP4.01□□□□□ -1.77
TRAPPC11-209ENST00000512476 SPTBN2O15020 2390 aa4.01□□□□□ -1.77
TRAPPC11-209ENST00000512476 HCG22E2RYF7 251 aa4.01□□□□□ -1.77
TRAPPC11-209ENST00000512476 H7BZZ5 65 aa4.01□□□□□ -1.77
TRAPPC11-209ENST00000512476 LYRM1O43325 122 aa4.01□□□□□ -1.77
TRAPPC11-209ENST00000512476 CFAP126Q5VTH2 177 aa4.01□□□□□ -1.77
TRAPPC11-209ENST00000512476 CYB561D1Q8N8Q1 229 aa4.01□□□□□ -1.77
TRAPPC11-209ENST00000512476 TMEM141Q96I45 108 aa4.01□□□□□ -1.77
TRAPPC11-209ENST00000512476 CACNA1GO43497 2377 aa4.01□□□□□ -1.77
TRAPPC11-209ENST00000512476 IGHV1-18A0A0C4DH31 117 aa4□□□□□ -1.77
TRAPPC11-209ENST00000512476 MPV17LQ2QL34 196 aa4□□□□□ -1.77
TRAPPC11-209ENST00000512476 TOMM5Q8N4H5 51 aa4□□□□□ -1.77
TRAPPC11-209ENST00000512476 ACACAQ13085 2346 aa4□□□□□ -1.77
TRAPPC11-209ENST00000512476 ARHGAP32A7KAX9 2087 aa4□□□□□ -1.77
TRAPPC11-209ENST00000512476 FAM168BA1KXE4 195 aa4□□□□□ -1.77
TRAPPC11-209ENST00000512476 MANBALQ9NQG1 85 aa4□□□□□ -1.77
TRAPPC11-209ENST00000512476 PTPRQQ9UMZ3 2332 aa4□□□□□ -1.77
TRAPPC11-209ENST00000512476 SPENQ96T58 3664 aaKnown RBP3.99□□□□□ -1.77
TRAPPC11-209ENST00000512476 DYNAPQ8N1N2 210 aa3.99□□□□□ -1.77
TRAPPC11-209ENST00000512476 MGAQ8IWI9 3026 aa3.99□□□□□ -1.77
TRAPPC11-209ENST00000512476 IQCF6A8MYZ5 107 aa3.99□□□□□ -1.77
TRAPPC11-209ENST00000512476 MPV17P39210 176 aa3.99□□□□□ -1.77
TRAPPC11-209ENST00000512476 CYP2G1PQ6ZSU1 146 aa3.99□□□□□ -1.77
TRAPPC11-209ENST00000512476 DMXL2Q8TDJ6 3036 aa3.99□□□□□ -1.77
TRAPPC11-209ENST00000512476 SSBP1Q04837 148 aaKnown RBP3.98□□□□□ -1.77
TRAPPC11-209ENST00000512476 DEFB113Q30KQ7 82 aa3.98□□□□□ -1.77
TRAPPC11-209ENST00000512476 C9orf116Q5BN46 136 aaPredicted RBP3.98□□□□□ -1.77
TRAPPC11-209ENST00000512476 KLF14Q8TD94 323 aaPredicted RBP3.98□□□□□ -1.77
TRAPPC11-209ENST00000512476 RNF5Q99942 180 aa3.98□□□□□ -1.77
TRAPPC11-209ENST00000512476 ANKRD11Q6UB99 2663 aaPredicted RBP3.98□□□□□ -1.77
TRAPPC11-209ENST00000512476 RTTNQ86VV8 2226 aa3.98□□□□□ -1.77
TRAPPC11-209ENST00000512476 INTS1Q8N201 2190 aaKnown RBP3.98□□□□□ -1.77
TRAPPC11-209ENST00000512476 TEX49A0A1B0GTD5 131 aa3.98□□□□□ -1.77
TRAPPC11-209ENST00000512476 CD24P25063 80 aa3.98□□□□□ -1.77
TRAPPC11-209ENST00000512476 MIR22HGQ0VDD5 57 aa3.98□□□□□ -1.77
TRAPPC11-209ENST00000512476 ARHGAP5-AS1Q96IT6 56 aa3.98□□□□□ -1.77
TRAPPC11-209ENST00000512476 CYYR1Q96J86 154 aa3.98□□□□□ -1.77
TRAPPC11-209ENST00000512476 BSNQ9UPA5 3926 aa3.98□□□□□ -1.77
TRAPPC11-209ENST00000512476 LAMA5O15230 3695 aa3.97□□□□□ -1.77
TRAPPC11-209ENST00000512476 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
TRAPPC11-209ENST00000512476 UMAD1C9J7I0 102 aa3.97□□□□□ -1.77
TRAPPC11-209ENST00000512476 H3BPC8 53 aa3.97□□□□□ -1.77
TRAPPC11-209ENST00000512476 PIGYQ3MUY2 71 aa3.97□□□□□ -1.77
TRAPPC11-209ENST00000512476 ASB16-AS1Q495Z4 193 aa3.97□□□□□ -1.77
TRAPPC11-209ENST00000512476 SPANXN1Q5VSR9 72 aa3.97□□□□□ -1.77
TRAPPC11-209ENST00000512476 Q8TAT8 98 aa3.97□□□□□ -1.77
TRAPPC11-209ENST00000512476 ZFHX3Q15911 3703 aa3.97□□□□□ -1.77
TRAPPC11-209ENST00000512476 CEP295Q9C0D2 2601 aa3.97□□□□□ -1.77
TRAPPC11-209ENST00000512476 A0A096LNJ9 63 aa3.97□□□□□ -1.77
TRAPPC11-209ENST00000512476 DEFB116Q30KQ4 102 aa3.97□□□□□ -1.77
TRAPPC11-209ENST00000512476 IGF2RP11717 2491 aa3.96□□□□□ -1.77
TRAPPC11-209ENST00000512476 TRAV13-2A0A0B4J235 113 aa3.96□□□□□ -1.77
TRAPPC11-209ENST00000512476 C6orf201Q7Z4U5 140 aa3.96□□□□□ -1.77
TRAPPC11-209ENST00000512476 TRGV9Q99603 122 aa3.96□□□□□ -1.77
TRAPPC11-209ENST00000512476 NHP2Q9NX24 153 aaKnown RBP3.96□□□□□ -1.77
TRAPPC11-209ENST00000512476 TRAPPC1Q9Y5R8 145 aa3.96□□□□□ -1.77
TRAPPC11-209ENST00000512476 SPTBN4Q9H254 2564 aa3.96□□□□□ -1.78
TRAPPC11-209ENST00000512476 SHANK1Q9Y566 2161 aa3.96□□□□□ -1.78
TRAPPC11-209ENST00000512476 ATMQ13315 3056 aa3.96□□□□□ -1.78
TRAPPC11-209ENST00000512476 A0A087WWC5 75 aa3.96□□□□□ -1.78
TRAPPC11-209ENST00000512476 BOD1L1Q8NFC6 3051 aa3.95□□□□□ -1.78
TRAPPC11-209ENST00000512476 H7C423 109 aa3.95□□□□□ -1.78
TRAPPC11-209ENST00000512476 ZNF861PO60384 105 aa3.95□□□□□ -1.78
TRAPPC11-209ENST00000512476 IL4P05112 153 aa3.95□□□□□ -1.78
TRAPPC11-209ENST00000512476 FXYD2P54710 66 aa3.95□□□□□ -1.78
TRAPPC11-209ENST00000512476 MYO7BQ6PIF6 2116 aa3.95□□□□□ -1.78
TRAPPC11-209ENST00000512476 CASC2Q6XLA1 102 aa3.95□□□□□ -1.78
TRAPPC11-209ENST00000512476 PIEZO1Q92508 2521 aa3.95□□□□□ -1.78
TRAPPC11-209ENST00000512476 Q6ZR54 194 aa3.95□□□□□ -1.78
TRAPPC11-209ENST00000512476 SPANXA2-OT1Q8N9U9 137 aa3.95□□□□□ -1.78
TRAPPC11-209ENST00000512476 CACNA1AO00555 2505 aa3.95□□□□□ -1.78
TRAPPC11-209ENST00000512476 NCOR2Q9Y618 2525 aa3.94□□□□□ -1.78
TRAPPC11-209ENST00000512476 KRTDAPP60985 99 aa3.94□□□□□ -1.78
TRAPPC11-209ENST00000512476 MOBPQ13875 183 aa3.94□□□□□ -1.78
TRAPPC11-209ENST00000512476 ZNF56Q15929 161 aa3.94□□□□□ -1.78
TRAPPC11-209ENST00000512476 PRR14LQ5THK1 2151 aa3.94□□□□□ -1.78
TRAPPC11-209ENST00000512476 ZNF826PQ6ZT77 177 aa3.94□□□□□ -1.78
TRAPPC11-209ENST00000512476 C17orf112F2Z3M2 114 aa3.93□□□□□ -1.78
TRAPPC11-209ENST00000512476 KRTAP25-1Q3LHN0 102 aa3.93□□□□□ -1.78
TRAPPC11-209ENST00000512476 Q8NAQ8 132 aa3.93□□□□□ -1.78
TRAPPC11-209ENST00000512476 PIEZO2Q9H5I5 2752 aa3.93□□□□□ -1.78
TRAPPC11-209ENST00000512476 TFF3Q07654 80 aa3.93□□□□□ -1.78
TRAPPC11-209ENST00000512476 KRTAP15-1Q3LI76 137 aa3.93□□□□□ -1.78
TRAPPC11-209ENST00000512476 HILPDAQ9Y5L2 63 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms