RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 CAMPP49913 170 aa5.89□□□□□ -1.47
NUP54-211ENST00000512151 RIGQ13278 110 aa5.89□□□□□ -1.47
NUP54-211ENST00000512151 SAMD10Q9BYL1 202 aa5.89□□□□□ -1.47
NUP54-211ENST00000512151 PHLDA3Q9Y5J5 127 aa5.89□□□□□ -1.47
NUP54-211ENST00000512151 LOC100131303A0A0U1RQF7 123 aa5.88□□□□□ -1.47
NUP54-211ENST00000512151 A0A1B0GUT8 65 aa5.88□□□□□ -1.47
NUP54-211ENST00000512151 RAB4AP20338 218 aa5.88□□□□□ -1.47
NUP54-211ENST00000512151 NTF3P20783 257 aa5.88□□□□□ -1.47
NUP54-211ENST00000512151 CTAG1AP78358 180 aa5.88□□□□□ -1.47
NUP54-211ENST00000512151 CFAP126Q5VTH2 177 aa5.88□□□□□ -1.47
NUP54-211ENST00000512151 ZNF479Q96JC4 524 aa5.88□□□□□ -1.47
NUP54-211ENST00000512151 CNFNQ9BYD5 112 aa5.88□□□□□ -1.47
NUP54-211ENST00000512151 TSTD3H0UI37 97 aa5.87□□□□□ -1.47
NUP54-211ENST00000512151 CACNG7P62955 275 aa5.87□□□□□ -1.47
NUP54-211ENST00000512151 SPANXN1Q5VSR9 72 aa5.87□□□□□ -1.47
NUP54-211ENST00000512151 UFSP1Q6NVU6 142 aa5.87□□□□□ -1.47
NUP54-211ENST00000512151 BORCS7Q96B45 105 aa5.87□□□□□ -1.47
NUP54-211ENST00000512151 TM2D2Q9BX73 214 aa5.87□□□□□ -1.47
NUP54-211ENST00000512151 KIF25-AS1Q9Y6Z4 181 aa5.87□□□□□ -1.47
NUP54-211ENST00000512151 A0A087WWL8 130 aa5.86□□□□□ -1.47
NUP54-211ENST00000512151 IGHV3-73A0A0B4J1V6 119 aa5.86□□□□□ -1.47
NUP54-211ENST00000512151 TRAV4A0A0B4J268 109 aa5.86□□□□□ -1.47
NUP54-211ENST00000512151 SCGB1D1O95968 90 aa5.86□□□□□ -1.47
NUP54-211ENST00000512151 AMTP48728 403 aa5.86□□□□□ -1.47
NUP54-211ENST00000512151 PIK3CD-AS1Q5SR53 167 aa5.86□□□□□ -1.47
NUP54-211ENST00000512151 NIT1Q86X76 327 aa5.86□□□□□ -1.47
NUP54-211ENST00000512151 ZNF664Q8N3J9 261 aa5.86□□□□□ -1.47
NUP54-211ENST00000512151 OR4C5Q8NGB2 326 aa5.86□□□□□ -1.47
NUP54-211ENST00000512151 LINC01600Q96MT4 127 aa5.86□□□□□ -1.47
NUP54-211ENST00000512151 TRGV4A0A0C4DH28 118 aa5.85□□□□□ -1.47
NUP54-211ENST00000512151 A8MWV9 139 aa5.85□□□□□ -1.47
NUP54-211ENST00000512151 PANO1I0J062 215 aa5.85□□□□□ -1.47
NUP54-211ENST00000512151 TIRAPP58753 221 aa5.85□□□□□ -1.47
NUP54-211ENST00000512151 TWIST1Q15672 202 aa5.85□□□□□ -1.47
NUP54-211ENST00000512151 TEX43Q6ZNM6 134 aa5.85□□□□□ -1.47
NUP54-211ENST00000512151 C14orf178Q8N769 122 aaPredicted RBP5.85□□□□□ -1.47
NUP54-211ENST00000512151 CHCHD1Q96BP2 118 aaKnown RBP5.85□□□□□ -1.47
NUP54-211ENST00000512151 URB1-AS1Q96HZ7 61 aa5.85□□□□□ -1.47
NUP54-211ENST00000512151 HSBP1O75506 76 aa5.84□□□□□ -1.47
NUP54-211ENST00000512151 PMCHP20382 165 aa5.84□□□□□ -1.47
NUP54-211ENST00000512151 DDTP30046 118 aa5.84□□□□□ -1.47
NUP54-211ENST00000512151 KRTAP10-8P60410 259 aa5.84□□□□□ -1.47
NUP54-211ENST00000512151 LAGE3Q14657 143 aa5.84□□□□□ -1.47
NUP54-211ENST00000512151 Q8N976 141 aa5.84□□□□□ -1.47
NUP54-211ENST00000512151 PRO1933Q9H354 126 aa5.84□□□□□ -1.47
NUP54-211ENST00000512151 Q9UF83 564 aa5.84□□□□□ -1.47
NUP54-211ENST00000512151 C3orf79P0CE67 100 aa5.83□□□□□ -1.48
NUP54-211ENST00000512151 FAM74A4Q5TZK3 123 aa5.83□□□□□ -1.48
NUP54-211ENST00000512151 FAM104BQ5XKR9 115 aa5.83□□□□□ -1.48
NUP54-211ENST00000512151 RNASEKQ6P5S7 137 aaKnown RBP5.83□□□□□ -1.48
NUP54-211ENST00000512151 ZFP2Q6ZN57 461 aa5.83□□□□□ -1.48
NUP54-211ENST00000512151 FAM19A2Q8N3H0 131 aa5.83□□□□□ -1.48
NUP54-211ENST00000512151 RNF185Q96GF1 192 aa5.83□□□□□ -1.48
NUP54-211ENST00000512151 DNAJC30Q96LL9 226 aa5.83□□□□□ -1.48
NUP54-211ENST00000512151 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.83□□□□□ -1.48
NUP54-211ENST00000512151 LINC00614P0C842 121 aa5.82□□□□□ -1.48
NUP54-211ENST00000512151 GATA1P15976 413 aaPredicted RBP5.82□□□□□ -1.48
NUP54-211ENST00000512151 KRTDAPP60985 99 aa5.82□□□□□ -1.48
NUP54-211ENST00000512151 SLC25A29Q8N8R3 303 aa5.82□□□□□ -1.48
NUP54-211ENST00000512151 AP1S3Q96PC3 154 aa5.82□□□□□ -1.48
NUP54-211ENST00000512151 TMEM191AQ9H0A3 160 aa5.82□□□□□ -1.48
NUP54-211ENST00000512151 DPH3P1Q9H4G8 78 aa5.82□□□□□ -1.48
NUP54-211ENST00000512151 CRCT1Q9UGL9 99 aa5.82□□□□□ -1.48
NUP54-211ENST00000512151 TRAV8-6A0A0B4J262 113 aa5.81□□□□□ -1.48
NUP54-211ENST00000512151 CIDEAO60543 219 aa5.81□□□□□ -1.48
NUP54-211ENST00000512151 MGPP08493 103 aa5.81□□□□□ -1.48
NUP54-211ENST00000512151 LBHQ53QV2 105 aaPredicted RBP5.81□□□□□ -1.48
NUP54-211ENST00000512151 AMN1Q8IY45 258 aa5.81□□□□□ -1.48
NUP54-211ENST00000512151 C14orf144Q96I85 54 aa5.81□□□□□ -1.48
NUP54-211ENST00000512151 TRAV26-2A0A0B4J265 109 aa5.8□□□□□ -1.48
NUP54-211ENST00000512151 IGHV1-24A0A0C4DH33 117 aa5.8□□□□□ -1.48
NUP54-211ENST00000512151 A0A0J9YXV3 536 aa5.8□□□□□ -1.48
NUP54-211ENST00000512151 TRBV6-4A0A1B0GX49 114 aa5.8□□□□□ -1.48
NUP54-211ENST00000512151 RHODO00212 210 aa5.8□□□□□ -1.48
NUP54-211ENST00000512151 SMIM17P0DL12 118 aa5.8□□□□□ -1.48
NUP54-211ENST00000512151 ZNF56Q15929 161 aa5.8□□□□□ -1.48
NUP54-211ENST00000512151 MRPL51Q4U2R6 128 aaKnown RBP5.8□□□□□ -1.48
NUP54-211ENST00000512151 SUMO4Q6EEV6 95 aa5.8□□□□□ -1.48
NUP54-211ENST00000512151 DAZ4Q86SG3 579 aaKnown RBP5.8□□□□□ -1.48
NUP54-211ENST00000512151 MRPL52Q86TS9 123 aaKnown RBP5.8□□□□□ -1.48
NUP54-211ENST00000512151 DAZ3Q9NR90 486 aaKnown RBP5.8□□□□□ -1.48
NUP54-211ENST00000512151 LAMTOR2Q9Y2Q5 125 aa5.8□□□□□ -1.48
NUP54-211ENST00000512151 A0A0U1RQV1 116 aa5.8□□□□□ -1.48
NUP54-211ENST00000512151 F5H697 171 aa5.8□□□□□ -1.48
NUP54-211ENST00000512151 SMKR1H3BMG3 65 aa5.8□□□□□ -1.48
NUP54-211ENST00000512151 M0QY20 66 aa5.8□□□□□ -1.48
NUP54-211ENST00000512151 PPBPP02775 128 aa5.8□□□□□ -1.48
NUP54-211ENST00000512151 PMCHL1Q16048 86 aa5.8□□□□□ -1.48
NUP54-211ENST00000512151 ORMDL3Q8N138 153 aa5.8□□□□□ -1.48
NUP54-211ENST00000512151 PRELID3AQ96N28 172 aa5.8□□□□□ -1.48
NUP54-211ENST00000512151 VAMP8Q9BV40 100 aa5.8□□□□□ -1.48
NUP54-211ENST00000512151 TRAV8-3A0A0A6YYJ7 113 aa5.79□□□□□ -1.48
NUP54-211ENST00000512151 C20orf202A1L168 122 aa5.79□□□□□ -1.48
NUP54-211ENST00000512151 D6R8Y8 96 aa5.79□□□□□ -1.48
NUP54-211ENST00000512151 LEPROTL1O95214 131 aa5.79□□□□□ -1.48
NUP54-211ENST00000512151 LINC00694P0DN24 101 aa5.79□□□□□ -1.48
NUP54-211ENST00000512151 SMIM15Q7Z3B0 74 aa5.79□□□□□ -1.48
NUP54-211ENST00000512151 NEXN-AS1Q8NBZ9 246 aa5.79□□□□□ -1.48
NUP54-211ENST00000512151 ATP6V0E2Q8NHE4 81 aa5.79□□□□□ -1.48
NUP54-211ENST00000512151 PRSS3P2Q8NHM4 247 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms