RNA–Protein interactions for RNA: ENST00000509818.5

SEC24D-209, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-209ENST00000509818 ERG28Q9UKR5 140 aa6.52□□□□□ -1.37
SEC24D-209ENST00000509818 TRBV7-3A0A075B6L6 115 aa6.51□□□□□ -1.37
SEC24D-209ENST00000509818 TRAV4A0A0B4J268 109 aa6.51□□□□□ -1.37
SEC24D-209ENST00000509818 P0DMU3 169 aa6.51□□□□□ -1.37
SEC24D-209ENST00000509818 FAM231AP0DMU4 169 aa6.51□□□□□ -1.37
SEC24D-209ENST00000509818 FAM231CP0DMU5 169 aa6.51□□□□□ -1.37
SEC24D-209ENST00000509818 OVOL2Q9BRP0 275 aa6.51□□□□□ -1.37
SEC24D-209ENST00000509818 NOP10Q9NPE3 64 aaKnown RBP6.51□□□□□ -1.37
SEC24D-209ENST00000509818 NACAE9PAV3 2078 aa6.51□□□□□ -1.37
SEC24D-209ENST00000509818 MEGF8Q7Z7M0 2845 aa6.51□□□□□ -1.37
SEC24D-209ENST00000509818 MYMXA0A1B0GTQ4 84 aa6.51□□□□□ -1.37
SEC24D-209ENST00000509818 PRSS29PA6NIE9 313 aa6.51□□□□□ -1.37
SEC24D-209ENST00000509818 M0QXV9 152 aa6.51□□□□□ -1.37
SEC24D-209ENST00000509818 Q6ZTI0 123 aa6.51□□□□□ -1.37
SEC24D-209ENST00000509818 C20orf203Q8NBC4 194 aa6.51□□□□□ -1.37
SEC24D-209ENST00000509818 DEFB104AQ8WTQ1 72 aa6.51□□□□□ -1.37
SEC24D-209ENST00000509818 PLAC8L1A1L4L8 177 aa6.5□□□□□ -1.37
SEC24D-209ENST00000509818 RPL39P62891 51 aaKnown RBP6.5□□□□□ -1.37
SEC24D-209ENST00000509818 PMVKQ15126 192 aa6.5□□□□□ -1.37
SEC24D-209ENST00000509818 PAPPA-AS1Q5QFB9 102 aa6.5□□□□□ -1.37
SEC24D-209ENST00000509818 Q6ZUT4 128 aa6.5□□□□□ -1.37
SEC24D-209ENST00000509818 TEN1Q86WV5 123 aa6.5□□□□□ -1.37
SEC24D-209ENST00000509818 C3orf56Q8N813 242 aa6.5□□□□□ -1.37
SEC24D-209ENST00000509818 VWFP04275 2813 aa6.5□□□□□ -1.37
SEC24D-209ENST00000509818 GAGE5Q13069 117 aa6.49□□□□□ -1.37
SEC24D-209ENST00000509818 GAGE6Q13070 117 aa6.49□□□□□ -1.37
SEC24D-209ENST00000509818 CDIP1Q9H305 208 aa6.49□□□□□ -1.37
SEC24D-209ENST00000509818 MGAM2Q2M2H8 2515 aa6.49□□□□□ -1.37
SEC24D-209ENST00000509818 TRBV10-1A0A0K0K1A3 114 aa6.49□□□□□ -1.37
SEC24D-209ENST00000509818 SMIM9A6NGZ8 99 aa6.49□□□□□ -1.37
SEC24D-209ENST00000509818 WIPF1O43516 503 aa6.49□□□□□ -1.37
SEC24D-209ENST00000509818 ZFAND6Q6FIF0 208 aa6.49□□□□□ -1.37
SEC24D-209ENST00000509818 KIR2DL5BQ8NHK3 375 aa6.49□□□□□ -1.37
SEC24D-209ENST00000509818 ANAPC13Q9BS18 74 aa6.49□□□□□ -1.37
SEC24D-209ENST00000509818 TRGV2A0A075B6R0 118 aa6.48□□□□□ -1.37
SEC24D-209ENST00000509818 K7EQD1 137 aa6.48□□□□□ -1.37
SEC24D-209ENST00000509818 GAGE7O76087 117 aa6.48□□□□□ -1.37
SEC24D-209ENST00000509818 GAGE12FP0CL80 117 aa6.48□□□□□ -1.37
SEC24D-209ENST00000509818 GAGE12GP0CL81 117 aa6.48□□□□□ -1.37
SEC24D-209ENST00000509818 GAGE12IP0CL82 117 aa6.48□□□□□ -1.37
SEC24D-209ENST00000509818 RPL36AP83881 106 aaKnown RBP6.48□□□□□ -1.37
SEC24D-209ENST00000509818 CFAP161Q6P656 301 aa6.48□□□□□ -1.37
SEC24D-209ENST00000509818 RPL36ALQ969Q0 106 aaKnown RBP6.48□□□□□ -1.37
SEC24D-209ENST00000509818 PGPEP1Q9NXJ5 209 aa6.48□□□□□ -1.37
SEC24D-209ENST00000509818 PYGO1Q9Y3Y4 419 aa6.48□□□□□ -1.37
SEC24D-209ENST00000509818 APOC4P55056 127 aa6.47□□□□□ -1.37
SEC24D-209ENST00000509818 UBE2D3P61077 147 aa6.47□□□□□ -1.37
SEC24D-209ENST00000509818 UBE2D2P62837 147 aa6.47□□□□□ -1.37
SEC24D-209ENST00000509818 SBSPONQ8IVN8 264 aa6.47□□□□□ -1.37
SEC24D-209ENST00000509818 ZNRF2Q8NHG8 242 aa6.47□□□□□ -1.37
SEC24D-209ENST00000509818 Q9UF83 564 aa6.47□□□□□ -1.37
SEC24D-209ENST00000509818 UBE2D1P51668 147 aa6.47□□□□□ -1.37
SEC24D-209ENST00000509818 CHCHD7Q9BUK0 85 aa6.47□□□□□ -1.37
SEC24D-209ENST00000509818 Q6Q795 121 aa6.46□□□□□ -1.38
SEC24D-209ENST00000509818 DAZ4Q86SG3 579 aaKnown RBP6.46□□□□□ -1.38
SEC24D-209ENST00000509818 MAPKAPK5-AS1Q8N8E1 139 aa6.46□□□□□ -1.38
SEC24D-209ENST00000509818 TTTY13Q9BZ97 58 aa6.46□□□□□ -1.38
SEC24D-209ENST00000509818 DAZ3Q9NR90 486 aaKnown RBP6.46□□□□□ -1.38
SEC24D-209ENST00000509818 IGLV4-69A0A075B6H9 119 aa6.45□□□□□ -1.38
SEC24D-209ENST00000509818 IGLV4-3A0A075B6K6 122 aa6.45□□□□□ -1.38
SEC24D-209ENST00000509818 TRGV4A0A0C4DH28 118 aa6.45□□□□□ -1.38
SEC24D-209ENST00000509818 IGHV3-38A0A0C4DH36 116 aa6.45□□□□□ -1.38
SEC24D-209ENST00000509818 TRBV6-4A0A1B0GX49 114 aa6.45□□□□□ -1.38
SEC24D-209ENST00000509818 HERVK_113P61574 105 aa6.45□□□□□ -1.38
SEC24D-209ENST00000509818 SHISA2Q6UWI4 295 aa6.45□□□□□ -1.38
SEC24D-209ENST00000509818 SLC25A29Q8N8R3 303 aa6.45□□□□□ -1.38
SEC24D-209ENST00000509818 X6R8D5 127 aa6.45□□□□□ -1.38
SEC24D-209ENST00000509818 MT-ATP8P03928 68 aa6.45□□□□□ -1.38
SEC24D-209ENST00000509818 PSMB2P49721 201 aa6.45□□□□□ -1.38
SEC24D-209ENST00000509818 EMP1P54849 157 aa6.45□□□□□ -1.38
SEC24D-209ENST00000509818 XGP55808 180 aa6.45□□□□□ -1.38
SEC24D-209ENST00000509818 OPRPNQ99935 248 aaPredicted RBP6.45□□□□□ -1.38
SEC24D-209ENST00000509818 GAGE12JA6NER3 117 aa6.44□□□□□ -1.38
SEC24D-209ENST00000509818 C11orf86A6NJI1 115 aa6.44□□□□□ -1.38
SEC24D-209ENST00000509818 GAGE4Q13068 117 aa6.44□□□□□ -1.38
SEC24D-209ENST00000509818 SRSF9Q13242 221 aaKnown RBP eCLIP6.44□□□□□ -1.38
SEC24D-209ENST00000509818 SCGB1D4Q6XE38 83 aa6.44□□□□□ -1.38
SEC24D-209ENST00000509818 NFE4Q86UQ8 179 aa6.44□□□□□ -1.38
SEC24D-209ENST00000509818 LINC00612Q8N6U2 182 aa6.44□□□□□ -1.38
SEC24D-209ENST00000509818 AMELXQ99217 191 aa6.44□□□□□ -1.38
SEC24D-209ENST00000509818 PRADC1Q9BSG0 188 aa6.44□□□□□ -1.38
SEC24D-209ENST00000509818 TIMM21Q9BVV7 248 aa6.44□□□□□ -1.38
SEC24D-209ENST00000509818 SPANXDQ9BXN6 97 aa6.44□□□□□ -1.38
SEC24D-209ENST00000509818 LOC107984156A0A0G2JMH3 177 aa6.43□□□□□ -1.38
SEC24D-209ENST00000509818 SCGB1C2P0DMR2 95 aa6.43□□□□□ -1.38
SEC24D-209ENST00000509818 SMCPP49901 116 aaPredicted RBP6.43□□□□□ -1.38
SEC24D-209ENST00000509818 FHL2Q14192 279 aa6.43□□□□□ -1.38
SEC24D-209ENST00000509818 ARL17AQ8IVW1 177 aa6.43□□□□□ -1.38
SEC24D-209ENST00000509818 RNF183Q96D59 192 aa6.43□□□□□ -1.38
SEC24D-209ENST00000509818 UBE2D4Q9Y2X8 147 aa6.43□□□□□ -1.38
SEC24D-209ENST00000509818 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.43□□□□□ -1.38
SEC24D-209ENST00000509818 IGKV2-29A2NJV5 120 aaPredicted RBP6.43□□□□□ -1.38
SEC24D-209ENST00000509818 ZNF815PA8K554 130 aa6.43□□□□□ -1.38
SEC24D-209ENST00000509818 LYRM9A8MSI8 78 aa6.43□□□□□ -1.38
SEC24D-209ENST00000509818 SNCGO76070 127 aa6.43□□□□□ -1.38
SEC24D-209ENST00000509818 GAGE2BQ13066 116 aa6.43□□□□□ -1.38
SEC24D-209ENST00000509818 GAGE2EQ4V326 116 aa6.43□□□□□ -1.38
SEC24D-209ENST00000509818 TMEM170BQ5T4T1 132 aa6.43□□□□□ -1.38
SEC24D-209ENST00000509818 LINC01600Q96MT4 127 aa6.43□□□□□ -1.38
SEC24D-209ENST00000509818 GAGE2DQ9UEU5 116 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms