RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 DAZ4Q86SG3 579 aaKnown RBP11.88□□□□□ -0.51
VCAN-204ENST00000502527 DAZ3Q9NR90 486 aaKnown RBP11.88□□□□□ -0.51
VCAN-204ENST00000502527 ERG28Q9UKR5 140 aa11.88□□□□□ -0.51
VCAN-204ENST00000502527 IGLV1-51P01701 117 aa11.87□□□□□ -0.51
VCAN-204ENST00000502527 IGLV5-45A0A087WSX0 123 aa11.87□□□□□ -0.51
VCAN-204ENST00000502527 EIF4EBP3O60516 100 aaPredicted RBP11.87□□□□□ -0.51
VCAN-204ENST00000502527 GIG44P09565 113 aaPredicted RBP11.87□□□□□ -0.51
VCAN-204ENST00000502527 SMCPP49901 116 aaPredicted RBP11.87□□□□□ -0.51
VCAN-204ENST00000502527 ZFAND6Q6FIF0 208 aa11.87□□□□□ -0.51
VCAN-204ENST00000502527 ATP6V0E2Q8NHE4 81 aa11.87□□□□□ -0.51
VCAN-204ENST00000502527 ZNF418Q8TF45 676 aaPredicted RBP11.87□□□□□ -0.51
VCAN-204ENST00000502527 SPANXDQ9BXN6 97 aa11.87□□□□□ -0.51
VCAN-204ENST00000502527 SPANXCQ9NY87 97 aa11.87□□□□□ -0.51
VCAN-204ENST00000502527 C16orf74Q96GX8 76 aa11.86□□□□□ -0.51
VCAN-204ENST00000502527 NOP10Q9NPE3 64 aaKnown RBP11.86□□□□□ -0.51
VCAN-204ENST00000502527 CDKN2A-AS1Q9UH64 79 aa11.86□□□□□ -0.51
VCAN-204ENST00000502527 NF1P21359 2839 aa11.86□□□□□ -0.51
VCAN-204ENST00000502527 TENM4Q6N022 2769 aa11.85□□□□□ -0.51
VCAN-204ENST00000502527 PRSS2P07478 247 aa11.85□□□□□ -0.51
VCAN-204ENST00000502527 CSDC2Q9Y534 153 aaKnown RBP11.85□□□□□ -0.51
VCAN-204ENST00000502527 SMAGPQ0VAQ4 97 aa11.85□□□□□ -0.51
VCAN-204ENST00000502527 C1QTNF4Q9BXJ3 329 aa11.85□□□□□ -0.51
VCAN-204ENST00000502527 A8MZ25 164 aa11.84□□□□□ -0.51
VCAN-204ENST00000502527 HERVK_113P63121 156 aa11.84□□□□□ -0.51
VCAN-204ENST00000502527 WNK1Q9H4A3 2382 aa11.84□□□□□ -0.51
VCAN-204ENST00000502527 HILS1P60008 231 aa11.83□□□□□ -0.51
VCAN-204ENST00000502527 MIAQ16674 131 aa11.83□□□□□ -0.51
VCAN-204ENST00000502527 ADAMTSL4-AS1Q5T5F5 129 aa11.83□□□□□ -0.51
VCAN-204ENST00000502527 C19orf73Q9NVV2 129 aa11.83□□□□□ -0.51
VCAN-204ENST00000502527 GAGE12JA6NER3 117 aa11.83□□□□□ -0.52
VCAN-204ENST00000502527 J3QKU1 62 aa11.83□□□□□ -0.52
VCAN-204ENST00000502527 TIMM17BO60830 172 aa11.83□□□□□ -0.52
VCAN-204ENST00000502527 RPL35AP18077 110 aaKnown RBP11.83□□□□□ -0.52
VCAN-204ENST00000502527 GAGE4Q13068 117 aa11.83□□□□□ -0.52
VCAN-204ENST00000502527 GAGE5Q13069 117 aa11.83□□□□□ -0.52
VCAN-204ENST00000502527 NTM-AS1Q6ZSK4 140 aa11.83□□□□□ -0.52
VCAN-204ENST00000502527 WFDC10AQ9H1F0 79 aa11.83□□□□□ -0.52
VCAN-204ENST00000502527 NBPF19A0A087WUL8 3843 aa11.82□□□□□ -0.52
VCAN-204ENST00000502527 H7C2G1 150 aa11.82□□□□□ -0.52
VCAN-204ENST00000502527 NDUFA7O95182 113 aa11.82□□□□□ -0.52
VCAN-204ENST00000502527 LINC00694P0DN24 101 aa11.82□□□□□ -0.52
VCAN-204ENST00000502527 PLA2G2AP14555 144 aa11.82□□□□□ -0.52
VCAN-204ENST00000502527 Q1RN00 199 aa11.82□□□□□ -0.52
VCAN-204ENST00000502527 FAM19A3Q7Z5A8 133 aa11.82□□□□□ -0.52
VCAN-204ENST00000502527 TMEM101Q96IK0 257 aa11.82□□□□□ -0.52
VCAN-204ENST00000502527 PDZD2O15018 2839 aa11.82□□□□□ -0.52
VCAN-204ENST00000502527 GAGE12HA6NDE8 117 aa11.82□□□□□ -0.52
VCAN-204ENST00000502527 NDUFA1O15239 70 aa11.82□□□□□ -0.52
VCAN-204ENST00000502527 CIDEAO60543 219 aa11.82□□□□□ -0.52
VCAN-204ENST00000502527 FOXI1Q12951 378 aa11.82□□□□□ -0.52
VCAN-204ENST00000502527 LINC00242Q5T6M2 205 aa11.82□□□□□ -0.52
VCAN-204ENST00000502527 SBSPONQ8IVN8 264 aa11.82□□□□□ -0.52
VCAN-204ENST00000502527 TRGV2A0A075B6R0 118 aa11.81□□□□□ -0.52
VCAN-204ENST00000502527 PLAC8L1A1L4L8 177 aa11.81□□□□□ -0.52
VCAN-204ENST00000502527 INSL3P51460 131 aa11.81□□□□□ -0.52
VCAN-204ENST00000502527 COX6A2Q02221 97 aa11.81□□□□□ -0.52
VCAN-204ENST00000502527 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.81□□□□□ -0.52
VCAN-204ENST00000502527 RNF183Q96D59 192 aa11.81□□□□□ -0.52
VCAN-204ENST00000502527 GTSF1LQ9H1H1 148 aa11.8□□□□□ -0.52
VCAN-204ENST00000502527 IGLV5-39A0A0G2JS06 123 aa11.8□□□□□ -0.52
VCAN-204ENST00000502527 GAGE7O76087 117 aa11.8□□□□□ -0.52
VCAN-204ENST00000502527 GAGE12FP0CL80 117 aa11.8□□□□□ -0.52
VCAN-204ENST00000502527 GAGE12GP0CL81 117 aa11.8□□□□□ -0.52
VCAN-204ENST00000502527 GAGE12IP0CL82 117 aa11.8□□□□□ -0.52
VCAN-204ENST00000502527 IFITM1P13164 125 aa11.8□□□□□ -0.52
VCAN-204ENST00000502527 CSNK1G2-AS1Q8NCQ2 148 aa11.8□□□□□ -0.52
VCAN-204ENST00000502527 SIGMAR1Q99720 223 aa11.8□□□□□ -0.52
VCAN-204ENST00000502527 SPATA25Q9BR10 227 aa11.8□□□□□ -0.52
VCAN-204ENST00000502527 OVOL2Q9BRP0 275 aa11.8□□□□□ -0.52
VCAN-204ENST00000502527 TEN1Q86WV5 123 aa11.79□□□□□ -0.52
VCAN-204ENST00000502527 CIRBPQ14011 172 aaKnown RBP11.79□□□□□ -0.52
VCAN-204ENST00000502527 TMEM243Q9BU79 118 aa11.79□□□□□ -0.52
VCAN-204ENST00000502527 CDC42SE2Q9NRR3 84 aa11.79□□□□□ -0.52
VCAN-204ENST00000502527 TRBV30A0A0K0K1B3 111 aa11.78□□□□□ -0.52
VCAN-204ENST00000502527 TRBV6-4A0A1B0GX49 114 aa11.78□□□□□ -0.52
VCAN-204ENST00000502527 TRAV13-1A0A0B4J241 112 aa11.77□□□□□ -0.52
VCAN-204ENST00000502527 UBE2L6O14933 153 aa11.77□□□□□ -0.52
VCAN-204ENST00000502527 PPDPFLQ8WWR9 84 aa11.77□□□□□ -0.52
VCAN-204ENST00000502527 ATXN8Q156A1 80 aa11.77□□□□□ -0.53
VCAN-204ENST00000502527 SETD2Q9BYW2 2564 aaPredicted RBP11.77□□□□□ -0.53
VCAN-204ENST00000502527 TRGV4A0A0C4DH28 118 aa11.76□□□□□ -0.53
VCAN-204ENST00000502527 M0QXV9 152 aa11.76□□□□□ -0.53
VCAN-204ENST00000502527 ACANP16112 2415 aa11.76□□□□□ -0.53
VCAN-204ENST00000502527 SETXQ7Z333 2677 aaKnown RBP11.76□□□□□ -0.53
VCAN-204ENST00000502527 SMIM1B2RUZ4 78 aa11.75□□□□□ -0.53
VCAN-204ENST00000502527 H7C423 109 aa11.75□□□□□ -0.53
VCAN-204ENST00000502527 SLC25A20O43772 301 aa11.75□□□□□ -0.53
VCAN-204ENST00000502527 NPC2P61916 151 aa11.75□□□□□ -0.53
VCAN-204ENST00000502527 Q9H8V8 135 aa11.75□□□□□ -0.53
VCAN-204ENST00000502527 ANK3Q12955 4377 aaKnown RBP11.75□□□□□ -0.53
VCAN-204ENST00000502527 C9JAW5 83 aa11.75□□□□□ -0.53
VCAN-204ENST00000502527 TRIAP1O43715 76 aa11.74□□□□□ -0.53
VCAN-204ENST00000502527 ICOSQ9Y6W8 199 aa11.74□□□□□ -0.53
VCAN-204ENST00000502527 NIPBLQ6KC79 2804 aaeCLIP11.73□□□□□ -0.53
VCAN-204ENST00000502527 MTORP42345 2549 aa11.73□□□□□ -0.53
VCAN-204ENST00000502527 LOC100131303A0A0U1RQF7 123 aa11.73□□□□□ -0.53
VCAN-204ENST00000502527 ANKRD29Q8N6D5 301 aa11.73□□□□□ -0.53
VCAN-204ENST00000502527 CARD19Q96LW7 228 aa11.73□□□□□ -0.53
VCAN-204ENST00000502527 CUBNO60494 3623 aa11.72□□□□□ -0.53
VCAN-204ENST00000502527 COX6CP09669 75 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms