RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 CDC42SE2Q9NRR3 84 aa9.43□□□□□ -0.9
RNF4-202ENST00000502316 IGKV2D-24A0A075B6R9 120 aa9.42□□□□□ -0.9
RNF4-202ENST00000502316 TRAV8-4A0A0B4J246 113 aa9.42□□□□□ -0.9
RNF4-202ENST00000502316 LINC01546A6NGU7 62 aa9.42□□□□□ -0.9
RNF4-202ENST00000502316 PSCAO43653 123 aa9.42□□□□□ -0.9
RNF4-202ENST00000502316 RPL39P62891 51 aaKnown RBP9.42□□□□□ -0.9
RNF4-202ENST00000502316 ORMDL2Q53FV1 153 aa9.42□□□□□ -0.9
RNF4-202ENST00000502316 DYNC1H1Q14204 4646 aaKnown RBP9.41□□□□□ -0.9
RNF4-202ENST00000502316 A0A087WTM6 91 aa9.41□□□□□ -0.9
RNF4-202ENST00000502316 LRCOL1A6NCL2 159 aa9.41□□□□□ -0.9
RNF4-202ENST00000502316 COLCA2A8K830 154 aa9.41□□□□□ -0.9
RNF4-202ENST00000502316 KRTAP26-1Q6PEX3 210 aa9.41□□□□□ -0.9
RNF4-202ENST00000502316 ZNF664Q8N3J9 261 aa9.41□□□□□ -0.9
RNF4-202ENST00000502316 MAPKAPK5-AS1Q8N8E1 139 aa9.41□□□□□ -0.9
RNF4-202ENST00000502316 SPANXA1Q9NS26 97 aa9.41□□□□□ -0.9
RNF4-202ENST00000502316 DNAH5Q8TE73 4624 aa9.41□□□□□ -0.9
RNF4-202ENST00000502316 DGAT2L7PQ6IED9 249 aa9.4□□□□□ -0.9
RNF4-202ENST00000502316 PRSS3P2Q8NHM4 247 aa9.4□□□□□ -0.9
RNF4-202ENST00000502316 C18orf32Q8TCD1 76 aa9.4□□□□□ -0.9
RNF4-202ENST00000502316 FAM104AQ969W3 186 aa9.4□□□□□ -0.9
RNF4-202ENST00000502316 PYGO1Q9Y3Y4 419 aa9.4□□□□□ -0.9
RNF4-202ENST00000502316 SCO1O75880 301 aa9.39□□□□□ -0.91
RNF4-202ENST00000502316 MRPS36P82909 103 aaKnown RBP9.39□□□□□ -0.91
RNF4-202ENST00000502316 C2orf66Q6UXQ4 117 aa9.38□□□□□ -0.91
RNF4-202ENST00000502316 Q6ZUT4 128 aa9.38□□□□□ -0.91
RNF4-202ENST00000502316 CYSLTR1Q9Y271 337 aa9.38□□□□□ -0.91
RNF4-202ENST00000502316 BIRC6Q9NR09 4857 aa9.37□□□□□ -0.91
RNF4-202ENST00000502316 IGLV10-54A0A075B6I4 117 aa9.37□□□□□ -0.91
RNF4-202ENST00000502316 ATP6V1G1O75348 118 aa9.37□□□□□ -0.91
RNF4-202ENST00000502316 TRGC2P03986 189 aa9.37□□□□□ -0.91
RNF4-202ENST00000502316 S100A1P23297 94 aa9.37□□□□□ -0.91
RNF4-202ENST00000502316 G0S2P27469 103 aa9.37□□□□□ -0.91
RNF4-202ENST00000502316 WFDC2Q14508 124 aa9.37□□□□□ -0.91
RNF4-202ENST00000502316 IGKV3OR2-268A0A0C4DH90 116 aa9.36□□□□□ -0.91
RNF4-202ENST00000502316 LINC00959A0A1B0GUT2 108 aa9.36□□□□□ -0.91
RNF4-202ENST00000502316 EREGO14944 169 aa9.36□□□□□ -0.91
RNF4-202ENST00000502316 NPSP0C0P6 89 aa9.36□□□□□ -0.91
RNF4-202ENST00000502316 FA2HQ7L5A8 372 aa9.36□□□□□ -0.91
RNF4-202ENST00000502316 TOMM6Q96B49 74 aa9.36□□□□□ -0.91
RNF4-202ENST00000502316 URB1-AS1Q96HZ7 61 aa9.36□□□□□ -0.91
RNF4-202ENST00000502316 IGLV4-3A0A075B6K6 122 aa9.35□□□□□ -0.91
RNF4-202ENST00000502316 IGIPA6NJ69 53 aa9.35□□□□□ -0.91
RNF4-202ENST00000502316 CCL25O15444 150 aa9.35□□□□□ -0.91
RNF4-202ENST00000502316 LINC00614P0C842 121 aa9.35□□□□□ -0.91
RNF4-202ENST00000502316 KRTAP10-2P60368 255 aa9.35□□□□□ -0.91
RNF4-202ENST00000502316 RNASE13Q5GAN3 156 aaKnown RBP9.35□□□□□ -0.91
RNF4-202ENST00000502316 BAALCQ8WXS3 180 aa9.35□□□□□ -0.91
RNF4-202ENST00000502316 CHCHD10Q8WYQ3 142 aaPredicted RBP9.35□□□□□ -0.91
RNF4-202ENST00000502316 OPRPNQ99935 248 aaPredicted RBP9.35□□□□□ -0.91
RNF4-202ENST00000502316 AP5S1Q9NUS5 200 aa9.35□□□□□ -0.91
RNF4-202ENST00000502316 LRP1BQ9NZR2 4599 aa9.35□□□□□ -0.91
RNF4-202ENST00000502316 LINC01549A6NIU2 74 aa9.34□□□□□ -0.91
RNF4-202ENST00000502316 SPATA12Q7Z6I5 190 aa9.34□□□□□ -0.91
RNF4-202ENST00000502316 Q8N814 137 aa9.34□□□□□ -0.91
RNF4-202ENST00000502316 C1orf196B1AJZ1 125 aa9.33□□□□□ -0.92
RNF4-202ENST00000502316 LECT2O14960 151 aa9.33□□□□□ -0.92
RNF4-202ENST00000502316 RAB5BP61020 215 aa9.33□□□□□ -0.92
RNF4-202ENST00000502316 SS18Q15532 418 aa9.33□□□□□ -0.92
RNF4-202ENST00000502316 TMEM141Q96I45 108 aa9.33□□□□□ -0.92
RNF4-202ENST00000502316 TIMM17AQ99595 171 aa9.33□□□□□ -0.92
RNF4-202ENST00000502316 GAGE12HA6NDE8 117 aa9.32□□□□□ -0.92
RNF4-202ENST00000502316 FOXI1Q12951 378 aa9.32□□□□□ -0.92
RNF4-202ENST00000502316 CDPF1Q6NVV7 123 aa9.32□□□□□ -0.92
RNF4-202ENST00000502316 ERASQ7Z444 233 aa9.32□□□□□ -0.92
RNF4-202ENST00000502316 PGPEP1Q9NXJ5 209 aa9.32□□□□□ -0.92
RNF4-202ENST00000502316 A0A096LNJ9 63 aa9.31□□□□□ -0.92
RNF4-202ENST00000502316 TRAV13-1A0A0B4J241 112 aa9.31□□□□□ -0.92
RNF4-202ENST00000502316 USP17L23D6RBM5 183 aa9.31□□□□□ -0.92
RNF4-202ENST00000502316 XCL1P47992 114 aa9.31□□□□□ -0.92
RNF4-202ENST00000502316 C14orf177Q52M58 125 aa9.31□□□□□ -0.92
RNF4-202ENST00000502316 CD164L2Q6UWJ8 174 aa9.31□□□□□ -0.92
RNF4-202ENST00000502316 NTN5Q8WTR8 489 aaPredicted RBP9.31□□□□□ -0.92
RNF4-202ENST00000502316 AMELXQ99217 191 aa9.31□□□□□ -0.92
RNF4-202ENST00000502316 IFITM10A6NMD0 228 aa9.3□□□□□ -0.92
RNF4-202ENST00000502316 Q6ZN92 141 aa9.3□□□□□ -0.92
RNF4-202ENST00000502316 TEX43Q6ZNM6 134 aa9.3□□□□□ -0.92
RNF4-202ENST00000502316 LINC00173Q6ZV60 143 aa9.3□□□□□ -0.92
RNF4-202ENST00000502316 CHCHD1Q96BP2 118 aaKnown RBP9.3□□□□□ -0.92
RNF4-202ENST00000502316 HBDP02042 147 aa9.29□□□□□ -0.92
RNF4-202ENST00000502316 PAPPA-AS1Q5QFB9 102 aa9.29□□□□□ -0.92
RNF4-202ENST00000502316 SCGB3A1Q96QR1 104 aa9.29□□□□□ -0.92
RNF4-202ENST00000502316 C15orf56Q8N910 161 aa9.28□□□□□ -0.92
RNF4-202ENST00000502316 C2orf88Q9BSF0 95 aa9.28□□□□□ -0.92
RNF4-202ENST00000502316 VCX2Q9H322 139 aa9.28□□□□□ -0.92
RNF4-202ENST00000502316 C16orf90A8MZG2 172 aa9.27□□□□□ -0.93
RNF4-202ENST00000502316 PRSS1P07477 247 aa9.27□□□□□ -0.93
RNF4-202ENST00000502316 UBE2D1P51668 147 aa9.27□□□□□ -0.93
RNF4-202ENST00000502316 PDZD11Q5EBL8 140 aa9.27□□□□□ -0.93
RNF4-202ENST00000502316 BAGE3Q86Y29 109 aa9.27□□□□□ -0.93
RNF4-202ENST00000502316 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.26□□□□□ -0.93
RNF4-202ENST00000502316 IGLV5-52A0A0A0MRZ9 124 aa9.26□□□□□ -0.93
RNF4-202ENST00000502316 IGHV3OR16-9A0A0B4J2B5 98 aa9.26□□□□□ -0.93
RNF4-202ENST00000502316 FUSP35637 526 aaKnown RBP eCLIP9.26□□□□□ -0.933e-6■□□□□ 10.6
RNF4-202ENST00000502316 LINC00310P59036 64 aa9.26□□□□□ -0.93
RNF4-202ENST00000502316 PMCHL1Q16048 86 aa9.26□□□□□ -0.93
RNF4-202ENST00000502316 LINC00242Q5T6M2 205 aa9.26□□□□□ -0.93
RNF4-202ENST00000502316 ZC2HC1BQ5TFG8 222 aa9.26□□□□□ -0.93
RNF4-202ENST00000502316 CFAP161Q6P656 301 aa9.26□□□□□ -0.93
RNF4-202ENST00000502316 FAM19A3Q7Z5A8 133 aa9.26□□□□□ -0.93
RNF4-202ENST00000502316 APOBP04114 4563 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms