RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 AP5S1Q9NUS5 200 aa11.06□□□□□ -0.64
COMMD3-214ENST00000496071 hDV102S1A0JD36 115 aa11.05□□□□□ -0.64
COMMD3-214ENST00000496071 C7orf77A4D0Y5 90 aa11.05□□□□□ -0.64
COMMD3-214ENST00000496071 GAGE12HA6NDE8 117 aa11.05□□□□□ -0.64
COMMD3-214ENST00000496071 CKS2P33552 79 aa11.05□□□□□ -0.64
COMMD3-214ENST00000496071 SMAGPQ0VAQ4 97 aa11.05□□□□□ -0.64
COMMD3-214ENST00000496071 CLLU1Q5K131 121 aa11.05□□□□□ -0.64
COMMD3-214ENST00000496071 MRPL54Q6P161 138 aaKnown RBP11.05□□□□□ -0.64
COMMD3-214ENST00000496071 MRPL52Q86TS9 123 aaKnown RBP11.05□□□□□ -0.64
COMMD3-214ENST00000496071 C20orf78Q9BR46 151 aa11.05□□□□□ -0.64
COMMD3-214ENST00000496071 CHAC1Q9BUX1 264 aa11.05□□□□□ -0.64
COMMD3-214ENST00000496071 TRBV24-1A0A075B6N3 115 aa11.04□□□□□ -0.64
COMMD3-214ENST00000496071 A0A1B0GXF2 115 aa11.04□□□□□ -0.64
COMMD3-214ENST00000496071 CNBPP62633 177 aaKnown RBP11.04□□□□□ -0.64
COMMD3-214ENST00000496071 SCXQ7RTU7 201 aa11.04□□□□□ -0.64
COMMD3-214ENST00000496071 ATP5L2Q7Z4Y8 100 aa11.04□□□□□ -0.64
COMMD3-214ENST00000496071 CHCHD10Q8WYQ3 142 aaPredicted RBP11.04□□□□□ -0.64
COMMD3-214ENST00000496071 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.03□□□□□ -0.64
COMMD3-214ENST00000496071 TCAPO15273 167 aa11.03□□□□□ -0.64
COMMD3-214ENST00000496071 RPL32P62910 135 aaKnown RBP11.03□□□□□ -0.64
COMMD3-214ENST00000496071 ANAPC16Q96DE5 110 aa11.03□□□□□ -0.64
COMMD3-214ENST00000496071 PPBPP02775 128 aa11.02□□□□□ -0.65
COMMD3-214ENST00000496071 MT-ND4LP03901 98 aa11.02□□□□□ -0.65
COMMD3-214ENST00000496071 PLA2G1BP04054 148 aaKnown RBP11.02□□□□□ -0.65
COMMD3-214ENST00000496071 TMEM18Q96B42 140 aa11.02□□□□□ -0.65
COMMD3-214ENST00000496071 CDC42SE2Q9NRR3 84 aa11.02□□□□□ -0.65
COMMD3-214ENST00000496071 LINC00959A0A1B0GUT2 108 aa11.01□□□□□ -0.65
COMMD3-214ENST00000496071 TNFRSF6BO95407 300 aa11.01□□□□□ -0.65
COMMD3-214ENST00000496071 ZNF664Q8N3J9 261 aa11.01□□□□□ -0.65
COMMD3-214ENST00000496071 CIRBP-AS1Q8TBR5 109 aa11.01□□□□□ -0.65
COMMD3-214ENST00000496071 CSDC2Q9Y534 153 aaKnown RBP11.01□□□□□ -0.65
COMMD3-214ENST00000496071 PHOX2AO14813 284 aa11□□□□□ -0.65
COMMD3-214ENST00000496071 SS18Q15532 418 aa11□□□□□ -0.65
COMMD3-214ENST00000496071 LINC00528Q8N1L1 170 aa11□□□□□ -0.65
COMMD3-214ENST00000496071 D6R8Y8 96 aa10.99□□□□□ -0.65
COMMD3-214ENST00000496071 SDIM1Q6ZPB5 146 aa10.99□□□□□ -0.65
COMMD3-214ENST00000496071 C15orf56Q8N910 161 aa10.99□□□□□ -0.65
COMMD3-214ENST00000496071 DNAH8Q96JB1 4490 aa10.98□□□□□ -0.65
COMMD3-214ENST00000496071 CCL25O15444 150 aa10.98□□□□□ -0.65
COMMD3-214ENST00000496071 FOXI1Q12951 378 aa10.98□□□□□ -0.65
COMMD3-214ENST00000496071 UQCC3Q6UW78 93 aa10.98□□□□□ -0.65
COMMD3-214ENST00000496071 TIMM21Q9BVV7 248 aa10.98□□□□□ -0.65
COMMD3-214ENST00000496071 UBE2D4Q9Y2X8 147 aa10.98□□□□□ -0.65
COMMD3-214ENST00000496071 IGHV3-64A0A075B6Q5 118 aa10.97□□□□□ -0.65
COMMD3-214ENST00000496071 XCL1P47992 114 aa10.97□□□□□ -0.65
COMMD3-214ENST00000496071 ORMDL3Q8N138 153 aa10.97□□□□□ -0.65
COMMD3-214ENST00000496071 SMIM2Q9BVW6 85 aa10.97□□□□□ -0.65
COMMD3-214ENST00000496071 FAT1Q14517 4588 aa10.96□□□□□ -0.65
COMMD3-214ENST00000496071 NPYP01303 97 aa10.96□□□□□ -0.65
COMMD3-214ENST00000496071 SLPIP03973 132 aa10.96□□□□□ -0.65
COMMD3-214ENST00000496071 IFITM2Q01629 132 aa10.96□□□□□ -0.65
COMMD3-214ENST00000496071 CD164L2Q6UWJ8 174 aa10.96□□□□□ -0.65
COMMD3-214ENST00000496071 TMEM136Q6ZRR5 245 aa10.96□□□□□ -0.65
COMMD3-214ENST00000496071 GVQW2A0A096LPI5 108 aaPredicted RBP10.95□□□□□ -0.66
COMMD3-214ENST00000496071 C1orf196B1AJZ1 125 aa10.95□□□□□ -0.66
COMMD3-214ENST00000496071 IGHV1-58A0A0C4DH39 117 aa10.94□□□□□ -0.66
COMMD3-214ENST00000496071 HIGD2BQ4VC39 106 aa10.94□□□□□ -0.66
COMMD3-214ENST00000496071 PRELID3AQ96N28 172 aa10.94□□□□□ -0.66
COMMD3-214ENST00000496071 LAMTOR2Q9Y2Q5 125 aa10.94□□□□□ -0.66
COMMD3-214ENST00000496071 SRRM2Q9UQ35 2752 aaKnown RBP10.93□□□□□ -0.66
COMMD3-214ENST00000496071 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.93□□□□□ -0.66
COMMD3-214ENST00000496071 TMEM218A2RU14 115 aa10.92□□□□□ -0.66
COMMD3-214ENST00000496071 PRSS47A8MTI9 375 aa10.92□□□□□ -0.66
COMMD3-214ENST00000496071 RAB5AP20339 215 aa10.92□□□□□ -0.66
COMMD3-214ENST00000496071 CIRBPQ14011 172 aaKnown RBP10.92□□□□□ -0.66
COMMD3-214ENST00000496071 IMMP2LQ96T52 175 aa10.92□□□□□ -0.66
COMMD3-214ENST00000496071 SPANXA1Q9NS26 97 aa10.92□□□□□ -0.66
COMMD3-214ENST00000496071 DPH3Q96FX2 82 aa10.91□□□□□ -0.66
COMMD3-214ENST00000496071 CTDSP1Q9GZU7 261 aa10.91□□□□□ -0.66
COMMD3-214ENST00000496071 TRAV13-1A0A0B4J241 112 aa10.9□□□□□ -0.66
COMMD3-214ENST00000496071 RPL39P62891 51 aaKnown RBP10.9□□□□□ -0.66
COMMD3-214ENST00000496071 RNASE13Q5GAN3 156 aaKnown RBP10.9□□□□□ -0.66
COMMD3-214ENST00000496071 Q6ZUT4 128 aa10.9□□□□□ -0.66
COMMD3-214ENST00000496071 VPS13BQ7Z7G8 4022 aa10.89□□□□□ -0.67
COMMD3-214ENST00000496071 PANO1I0J062 215 aa10.89□□□□□ -0.67
COMMD3-214ENST00000496071 ZNF561-AS1K7EIQ3 104 aa10.89□□□□□ -0.67
COMMD3-214ENST00000496071 COX7A2LO14548 114 aa10.89□□□□□ -0.67
COMMD3-214ENST00000496071 ADCYAP1P18509 176 aa10.89□□□□□ -0.67
COMMD3-214ENST00000496071 MALP21145 153 aa10.89□□□□□ -0.67
COMMD3-214ENST00000496071 MRPS36P82909 103 aaKnown RBP10.89□□□□□ -0.67
COMMD3-214ENST00000496071 SEC11CQ9BY50 192 aa10.89□□□□□ -0.67
COMMD3-214ENST00000496071 MAP1LC3AQ9H492 121 aa10.89□□□□□ -0.67
COMMD3-214ENST00000496071 PKIGQ9Y2B9 76 aa10.89□□□□□ -0.67
COMMD3-214ENST00000496071 LORP23490 312 aaPredicted RBP10.88□□□□□ -0.67
COMMD3-214ENST00000496071 COX6A2Q02221 97 aa10.88□□□□□ -0.67
COMMD3-214ENST00000496071 TRAV9-1A0A075B6T8 112 aa10.87□□□□□ -0.67
COMMD3-214ENST00000496071 SPACA4Q8TDM5 124 aa10.87□□□□□ -0.67
COMMD3-214ENST00000496071 LOC389332A0A1B0GUA5 103 aa10.86□□□□□ -0.67
COMMD3-214ENST00000496071 APOMO95445 188 aa10.86□□□□□ -0.67
COMMD3-214ENST00000496071 IFI27P40305 119 aaPredicted RBP10.86□□□□□ -0.67
COMMD3-214ENST00000496071 RPL37AP61513 92 aaKnown RBP10.86□□□□□ -0.67
COMMD3-214ENST00000496071 Q8N8P6 123 aa10.86□□□□□ -0.67
COMMD3-214ENST00000496071 PRSS3P2Q8NHM4 247 aa10.86□□□□□ -0.67
COMMD3-214ENST00000496071 PYGO1Q9Y3Y4 419 aa10.86□□□□□ -0.67
COMMD3-214ENST00000496071 A0A087WYN8 130 aa10.85□□□□□ -0.67
COMMD3-214ENST00000496071 K7EMI3 77 aa10.85□□□□□ -0.67
COMMD3-214ENST00000496071 CHTF8P0CG12 524 aa10.85□□□□□ -0.67
COMMD3-214ENST00000496071 KRTAP10-4P60372 401 aaPredicted RBP10.85□□□□□ -0.67
COMMD3-214ENST00000496071 SYCNQ0VAF6 134 aa10.85□□□□□ -0.67
COMMD3-214ENST00000496071 COMMD7Q86VX2 200 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms